Clone BS14221 Report

Search the DGRC for BS14221

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:142
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG32392-RA
Protein status:BS14221.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14221.3prime Sequence

794 bp (684 high quality bases) assembled on 2006-10-13

> BS14221.3prime
ATGGTCTAGAAAGCTTTTAGAGATGAGGAGCCGGTGGTGGCGGTTCGGGG
CACTCCTCCATTTCCGTTTCCGATTCGCAGGGACACGCCTCCATCTCATC
GATGGCACAGCCCTCCTCCTCACAAACGCCCGCATCCGGTCCGGATGGTT
CCGATTCAGGTTCCTTGTAGCCGGCATAGATCTCGGCACGCTGCTTGATA
ATCTCCTGAATGATGGCGGTGAGAATCTCGCGCGAGTCCACTATATGGCC
CACTTCCTCGGCCACCTCGGCGGACAACCACGGGCAGACGCTCTTCATAA
GCTGCTCCTTCTTAACGGCATCGCTGGCCGGCTCAATGTTCTCCAGCACC
TCCGGCACCAGACTGGCAATGTGTCCCTGGAGCAACTTGGCCGCCGTCAC
GCTCTTCTGCATCTCAGCGTCCAGCTCCTTGGCAATCGCATCCTGTCGCA
GGCGACGCTCCTTCTCCGCCTGCAAGCGCAGCTCCTCAGCTTCCAAGCGG
CGCAGCTCGGCCAGTTCCGCCTCCCTCTGGGCCAGGAATTCTTCCTGTTT
GCGTCGCAGACTGGACAGTTCCATCTCGTGAGCCACCTCCAGCATGCTTT
GTTCAATGCAGGCGTCCACCAGGACATCGATGATTGGCTGCGCCTCGGCA
TCGAAGTGGAAGAGTTCGCCCTCACCGATCTCGGTGGCCACATCCACGCC
CACCTTGGCCGGTATGAACGGAGGCGTCGGTGGCTTCTCAAGGAACAGGT
CCGTCTGCGTGTCGATGGTGAACTCCGGCGGACGCTGGCACCCA

BS14221.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-PA 1236 CG32392-RA 466..1236 787..17 3730 99.3 Minus
CG32392-PB 1980 CG32392-RB 1210..1980 787..17 3730 99.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-RB 2507 CG32392-RB 1434..2204 787..17 3780 99.4 Minus
CG32392-RA 1657 CG32392-RA 584..1354 787..17 3780 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:10:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6756932..6757454 17..539 2570 99.4 Plus
3L 28110227 3L 6757519..6757766 540..787 1210 99.2 Plus
Blast to na_te.dros performed on 2015-02-06 10:10:09 has no hits.

BS14221.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:13 Download gff for BS14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32392-PB 1205..1980 17..793 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:38:45 Download gff for BS14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 579..1360 11..793 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:24:15 Download gff for BS14221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 579..1360 11..793 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:24:15 Download gff for BS14221.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6756926..6757454 11..539 98 <- Plus
3L 6757519..6757770 540..793 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:38:45 Download gff for BS14221.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6750026..6750554 11..539 98 <- Plus
arm_3L 6750619..6750870 540..793 98   Plus

BS14221.5prime Sequence

735 bp (642 high quality bases) assembled on 2006-10-13

> BS14221.5prime
GAAGTTATCAGTCGACATGCCGACGATCCCGAAGAGGGATTACAAACCCA
ATGGTGGTGGCAAAAGCTCAGGAATGGATTTCCTCAGTTCCGGCATCAAG
GGAACCGAGGTCACCGAGATGCAGCTCAAGTGGCACGAGAATCCTTGTCC
AGCGCCACCATGCAAACAGGCATTTTGGTGGGCCAGTCATCCCAAGCCGA
TCAAAATCAAAGGTTGCCCCAAACCCGTCGTCCCGCCGCCGGAACCCTAC
AAGAACGTCATGTACGACCGTCGCGTCATAAAGGGCAGCAACTTCGGCAA
CGCCTCTCTGGTGACGGATGTGGATCCCTTCGACAAGGCCGCCGAATTGA
GGCGTCGCAATATGTTGCGCAAACGGACGATGCAGTGCCGCAATCAGAGA
AATGTCCTGGGCACACCGCCGCCGGTCAAGGGGCGGAAGCACGAGACCAT
ACAGACGGAGAAGTATCTGGAGAAGTTGGTGCAGCGTCCGCCGGAGTTCA
CCATCGACACGCAGACGGACCTGTTCCTCGAGAAGCCACCGACGCCTCCG
TTCATACCGGCCAAGGTGGGCGTGGATGTGGCCACCGAGATCGGTGAGGG
CGAACTCTTCCACTTCGATGCCGAGGCGCAGCCAATCATCGATGTCCTGG
TGGACGCCTGCTTTGAACAAAGCATGCTGGAGGTGGCTCACGAGATGGAC
CTGTCCAGTCTGCGACGCAAACAGGAAGAATTCCT

BS14221.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-PA 1236 CG32392-RA 1..719 17..735 3495 99.4 Plus
CG32392-PB 1980 CG32392-RB 951..1463 223..735 2490 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:39:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-RA 1657 CG32392-RA 119..837 17..735 3535 99.4 Plus
CG32392-RB 2507 CG32392-RB 1175..1687 223..735 2520 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:38:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6757519..6757935 729..313 2040 99.3 Minus
3L 28110227 3L 6762923..6763128 222..17 1015 99.5 Minus
3L 28110227 3L 6758020..6758110 313..223 455 100 Minus
Blast to na_te.dros performed on 2015-02-08 11:39:00 has no hits.

BS14221.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:13 Download gff for BS14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32392-PA 1..719 17..735 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:35:46 Download gff for BS14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 115..837 10..735 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:41:13 Download gff for BS14221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 115..837 10..735 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:41:13 Download gff for BS14221.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6757513..6757934 314..735 98 <- Minus
3L 6758020..6758110 223..313 100 <- Minus
3L 6762923..6763132 10..222 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:35:46 Download gff for BS14221.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6750613..6751034 314..735 98 <- Minus
arm_3L 6751120..6751210 223..313 100 <- Minus
arm_3L 6756023..6756232 10..222 98   Minus

BS14221.complete Sequence

1268 bp assembled on 2006-11-01

GenBank Submission: FJ637619

> BS14221.complete
GAAGTTATCAGTCGACATGCCGACGATCCCGAAGAGGGATTACAAACCCA
ATGGTGGTGGCAAAAGCTCAGGAATGGATTTCCTCAGTTCCGGCATCAAG
GGAACCGAGGTCACCGAGATGCAGCTCAAGTGGCACGAGAATCCTTGTCC
AGCGCCACCATGCAAACAGGCATTTTGGTGGGCCAGTCATCCCAAGCCGA
TCAAAATCAAAGGTTGCCCCAAACCCGTCGTCCCGCCGCCGGAACCCTAC
AAGAACGTCATGTACGACCGTCGCGTCATAAAGGGCAGCAACTTCGGCAA
CGCCTCTCTGGTGACGGATGTGGATCCCTTCGACAAGGCCGCCGAATTGA
GGCGTCGCAATATGTTGCGCAAACGGACGATGCAGTGCCGCAATCAGAGA
AATGTCCTGGGCACACCGCCGCCGGTCAAGGGGCGGAAGCACGAGACCAT
ACAGACGGAGAAGTATCTGGAGAAGTTGGTGCAGCGTCCGCCGGAGTTCA
CCATCGACACGCAGACGGACCTGTTCCTCGAGAAGCCACCGACGCCTCCG
TTCATACCGGCCAAGGTGGGCGTGGATGTGGCCACCGAGATCGGTGAGGG
CGAACTCTTCCACTTCGATGCCGAGGCGCAGCCAATCATCGATGTCCTGG
TGGACGCCTGCATTGAACAAAGCATGCTGGAGGTGGCTCACGAGATGGAA
CTGTCCAGTCTGCGACGCAAACAGGAAGAATTCCTGGCCCAGAGGGAGGC
GGAACTGGCCGAGCTGCGCCGCTTGGAAGCTGAGGAGCTGCGCTTGCAGG
CGGAGAAGGAGCGTCGCCTGCGACAGGATGCGATTGCCAAGGAGCTGGAC
GCTGAGATGCAGAAGAGCGTGACGGCGGCCAAGTTGCTCCAGGGACACAT
TGCCAGTCTGGTGCCGGAGGTGCTGGAGAACATTGAGCCGGCCAGCGATG
CCGTTAAGAAGGAGCAGCTTATGAAGAGCGTCTGCCCGTGGTTGTCCGCC
GAGGTGGCCGAGGAAGTGGGCCATATAGTGGACTCGCGCGAGATTCTCAC
CGCCATCATTCAGGAGATTATCAAGCAGCGTGCCGAGATCTATGCCGGCT
ACAAGGAACCTGAATCGGAACCATCCGGACCGGATGCGGGCGTTTGTGAG
GAGGAGGGCTGTGCCATCGATGAGATGGAGGCGTGTCCCTGCGAATCGGA
AACGGAAATGGAGGAGTGCCCCGAACCGCCACCACCGGCTCCTCATCTCT
AAAAGCTTTCTAGACCAT

BS14221.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-RA 1236 CG32392-PA 1..1236 17..1252 6105 99.6 Plus
CG32392-RB 1980 CG32392-PB 951..1980 223..1252 5090 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-RA 1657 CG32392-RA 119..1354 17..1252 6105 99.6 Plus
CG32392-RB 2507 CG32392-RB 1175..2204 223..1252 5090 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6756932..6757454 1252..730 2570 99.4 Minus
3L 28110227 3L 6757519..6757935 729..313 2070 99.8 Minus
3L 28110227 3L 6762923..6763128 222..17 1015 99.5 Minus
3L 28110227 3L 6758020..6758110 313..223 455 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:32:33 has no hits.

BS14221.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:47 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 1..1236 17..1252 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:11:03 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 115..1360 10..1258 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:01:30 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 119..1352 17..1250 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:47 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 115..1360 10..1258 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:56 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
CG32392-RA 119..1352 17..1250 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:56 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6756934..6757454 730..1250 99 <- Minus
3L 6757519..6757934 314..729 99 <- Minus
3L 6758020..6758110 223..313 100 <- Minus
3L 6762923..6763128 17..222 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:01:30 Download gff for BS14221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6750034..6750554 730..1250 99 <- Minus
arm_3L 6750619..6751034 314..729 99 <- Minus
arm_3L 6751120..6751210 223..313 100 <- Minus
arm_3L 6756023..6756228 17..222 99   Minus

BS14221.pep Sequence

Translation from 16 to 1251

> BS14221.pep
MPTIPKRDYKPNGGGKSSGMDFLSSGIKGTEVTEMQLKWHENPCPAPPCK
QAFWWASHPKPIKIKGCPKPVVPPPEPYKNVMYDRRVIKGSNFGNASLVT
DVDPFDKAAELRRRNMLRKRTMQCRNQRNVLGTPPPVKGRKHETIQTEKY
LEKLVQRPPEFTIDTQTDLFLEKPPTPPFIPAKVGVDVATEIGEGELFHF
DAEAQPIIDVLVDACIEQSMLEVAHEMELSSLRRKQEEFLAQREAELAEL
RRLEAEELRLQAEKERRLRQDAIAKELDAEMQKSVTAAKLLQGHIASLVP
EVLENIEPASDAVKKEQLMKSVCPWLSAEVAEEVGHIVDSREILTAIIQE
IIKQRAEIYAGYKEPESEPSGPDAGVCEEEGCAIDEMEACPCESETEMEE
CPEPPPPAPHL*

BS14221.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG32392-PA 411 CG32392-PA 1..411 1..411 2164 100 Plus
CG32392-PB 659 CG32392-PB 317..659 69..411 1765 99.7 Plus