Clone BS14223 Report

Search the DGRC for BS14223

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:142
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG32087-RA
Protein status:BS14223.pep: full length peptide match
Sequenced Size:1256

Clone Sequence Records

BS14223.complete Sequence

1256 bp assembled on 2009-12-07

GenBank Submission: KX801981

> BS14223.complete
GAAGTTATCAGTCGACATGGCTGCTAGCAATGACACTGAAGCAGGACACT
CTTCATTGCCCAGTGAAATAGATCGCTTGGCTGAACTGGTACAGGAGCGG
CTGGAATGGAAGTCTCTGGTTCTTTGGCGTCGTCCTGTGCAGACTTTGAA
GTATGGTGGCCTGGAGGCCGGGCATTTGTTGCTATCCTTCATCGAAAAGC
TGTTGAATCTGTGGCTAGTGGGCGGTCTGCTGCTGTTGGGCATGTTTTGT
TTACTGCCAGGACCTCATGCGGATTTCGTGATTTTCTGCAAGCATAGGTT
TGGATTTGCGGTCTACTGGCTGGGCCTGGGCGTGCTCTCATCTGTGGGCT
TTGGCACTGGGTTGCACACCTTTCTGCTCTACCTGGGCCCTCACCTAGCA
GCAGTCACTCTGGCCGCCTACGAGTGTCAAACGCTGGACTTTCCCACTCC
TCCGTATCCGGACATAAAAGTCTGCCCACAGGAGCCGTACAAGCGCAATT
ACCCAGATGTGTGGCAAATTTTGGCAAAGGTGCGTCCGGAGGCACTACTC
TGGGGCATTGGCACTGCTCTTGGTGAGCTGCCGCCATACTTTATGACACG
TAGAGCACGGCTCTCTGGCAAGGAGTTGGATGGAGCGGAGGAGGAAAAGT
TATTGGATGAAAGGCGAAGGTGCGGAAAGCTAGGCATGCTCGACCATGCC
AAGCTGTTCATGGAACGGGTGATGCGAAGAGTGGGCTTCATGGGAATACT
ATTCTGCGCCAGCGTACCCAATCCTCTGTTCGACCTGGCCGGCATAACGT
GCGGACATTTTCTGGTGCCCTTTTGGAAGTTCTTTGTGGCCACCCTGATC
GGCAAGGCGTTAATCAAGGCCACCATACAGCAGTTGTTTGTTATTGCGTC
CCTAACCGAGAGTCTAGTCGATAGGTTTGTGGTCGGTCTGGGGAAGCTAC
CCTATTTGGGACCTCCAATGCAGCGCATGATCAGGGAACTGCTGCAGTCG
ACGAAGCAGCAGATGCATGGAACAGTAAATTCCAATTCCCTGGCCTATCT
AAGCCATCTGGTTCGTGCTTTCGAGCTGTGTGCCTTCATCATGGTCACCT
GTTTCGTAGTATCTTCGCTGAACTGCCTCGCGCAAATCCATTGCAAGCGC
CAGCAGGAGAAGAAGCGTAAGATGCGAAACCTGGAGATGATACTGTATGC
CGATACGGAGACATCCTCGTCGGAGGAGTTCAGCGTCTAAAAGCTTTCTA
GACCAT

BS14223.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-RA 1224 CG32087-PA 1..1224 17..1240 6090 99.8 Plus
Tango5-RE 1593 CG32675-PE 625..740 311..426 310 84.5 Plus
Tango5-RF 1593 CG32675-PF 625..740 311..426 310 84.5 Plus
Tango5-RE 1593 CG32675-PE 1077..1191 754..868 260 81.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-RA 1467 CG32087-RA 80..1304 16..1240 6095 99.8 Plus
Tango5-RE 3141 CG32675-RE 1735..1850 311..426 310 84.5 Plus
Tango5-RF 2298 CG32675-RF 892..1007 311..426 310 84.5 Plus
Tango5-RE 3141 CG32675-RE 2187..2301 754..868 260 81.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11732223..11733447 16..1240 6095 99.8 Plus
X 23542271 X 10761617..10761732 426..311 310 84.5 Minus
X 23542271 X 10760888..10760989 868..767 255 83.3 Minus
Blast to na_te.dros performed on 2014-11-28 01:51:34 has no hits.

BS14223.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:18 Download gff for BS14223.complete
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 81..1302 17..1238 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:44 Download gff for BS14223.complete
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 81..1302 17..1238 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:13:33 Download gff for BS14223.complete
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 82..1303 17..1238 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:31 Download gff for BS14223.complete
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 81..1302 17..1238 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:31 Download gff for BS14223.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11732224..11733445 17..1238 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:44 Download gff for BS14223.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11725324..11726545 17..1238 99   Plus

BS14223.3prime Sequence

638 bp (500 high quality bases) assembled on 2006-10-13

> BS14223.3prime
ATGGTCTAGAAAGCTTTTAGACGCTGAACTCCTCCGACGAGGATGTCTCC
GTATCGGCATACAGTATCATCTCCAGGTTTCGCATCTTACGCTTCTTCTC
CTGCTGGCGCTTGCAATGGATTTGCGCGAGGCAGTTCAGCGAAGATACTA
CGAAACAGGTGACCATGATGAAGGCACACAGCTCGAAAGCACGAACCAGA
TGGCTTAGATAGGCCAGGGAATTGGAATTTACTGTTCCATGCATCTGCTG
CTTCGTCGACTGCAGCAGTTCCCTGATCATGCGCTGCATTGGAGGTCCCA
AATAGGGTAGCTTCCCCAGACCGACCACAAACCTATCGACTAGACTCTCG
GTTAGGGACGCAATAACAAACAACTGCTGTATGGTGGCCTTGATTAACGC
CTTGCCGATCAGGGTGGCCACAAAGAACTTCCAAAAGGGCACCAGAAAAT
GTCCGCACGTTATGCCGGCCAGGTCGAACAGAGGATTGGGTACGCTGGCG
CAGAATAGTATTCCCATGAAGCCCACTCTTCGCATCACCCGTTCCATGAA
CAGCTTGGCATGGTCGAGCATGCCTAGCTTTCCGCACCTTCGCCTTTTCT
TCAATAACTTTTCCCTCCTCCGCTCCATCAAACTCCTT

BS14223.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-PA 1224 CG32087-RA 604..1224 638..17 2970 99.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-RA 1467 CG32087-RA 684..1304 638..17 3025 99.2 Minus
Tango5-RE 3141 CG32675-RE 2187..2301 503..389 260 81.7 Minus
Tango5-RF 2298 CG32675-RF 1344..1458 503..389 260 81.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11732827..11733447 638..17 3000 99.2 Minus
X 23542271 X 10760888..10760989 389..490 255 83.3 Plus
Blast to na_te.dros performed on 2015-02-10 15:21:48 has no hits.

BS14223.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:14 Download gff for BS14223.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32087-PA 604..1224 17..638 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:38:49 Download gff for BS14223.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 684..1306 13..638 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:12:39 Download gff for BS14223.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 684..1306 13..638 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:12:39 Download gff for BS14223.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11732827..11733449 13..638 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:38:49 Download gff for BS14223.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11725927..11726549 13..638 98   Minus

BS14223.5prime Sequence

490 bp (487 high quality bases) assembled on 2006-10-13

> BS14223.5prime
GAAGTTATCAGTCGACATGGCTGCTAGCAATGACACTGAAGCAGGACACT
CTTCATTGCCCAGTGAAATAGATCGCTTGGCTGAACTGGTACAGGAGCGG
CTGGAATGGAAGTCTCTGGTTCTTTGGCGTCGTCCTGTGCAGACTTTGAA
GTATGGTGGCCTGGAGGCCGGGCATTTGTTGCTATCCTTCATCGAAAAGC
TGTTGAATCTGTGGCTAGTGGGCGGTCTGCTGCTGTTGGGCATGTTTTGT
TTACTGCCAGGACCTCATGCGGATTTCGTGATTTTCTGCAAGCATAGGTT
TGGATTTGCGGTCTACTGGCTGGGCCTGGGCGTGCTCTCATCTGTGGGCT
TTGGCACTGGGTTGCACACCTTTCTGCTCTACCTGGGCCCTCACCTAGCA
GCAGTCACTCTGGCCGCCTACGAGTGTCAAACGCTGGACTTTCCCACTCC
TCCGTATCCGGACATAAAAGTCTGCCCACAGGAGCCGTAC

BS14223.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-PA 1224 CG32087-RA 1..474 17..490 2370 100 Plus
CG32675-PB 1287 CG32675-RB 319..395 311..387 135 87 Plus
CG32675-PA 1593 CG32675-RA 625..701 311..387 135 87 Plus
CG32675-PC 1593 CG32675-RC 625..701 311..387 135 87 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-RA 1467 CG32087-RA 80..554 16..490 2375 100 Plus
Tango5-RE 3141 CG32675-RE 1735..1850 311..426 310 85.5 Plus
Tango5-RF 2298 CG32675-RF 892..1007 311..426 310 85.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11732223..11732697 16..490 2375 100 Plus
X 23542271 X 10761617..10761732 426..311 310 84.5 Minus
Blast to na_te.dros performed on 2015-02-13 01:16:57 has no hits.

BS14223.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:15 Download gff for BS14223.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32087-PA 1..474 17..490 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 22:48:17 Download gff for BS14223.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 71..554 7..490 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:18:50 Download gff for BS14223.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32087-RA 71..554 7..490 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:18:50 Download gff for BS14223.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11732214..11732697 7..490 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 22:48:17 Download gff for BS14223.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11725314..11725797 7..490 99   Plus

BS14223.pep Sequence

Translation from 16 to 1239

> BS14223.pep
MAASNDTEAGHSSLPSEIDRLAELVQERLEWKSLVLWRRPVQTLKYGGLE
AGHLLLSFIEKLLNLWLVGGLLLLGMFCLLPGPHADFVIFCKHRFGFAVY
WLGLGVLSSVGFGTGLHTFLLYLGPHLAAVTLAAYECQTLDFPTPPYPDI
KVCPQEPYKRNYPDVWQILAKVRPEALLWGIGTALGELPPYFMTRRARLS
GKELDGAEEEKLLDERRRCGKLGMLDHAKLFMERVMRRVGFMGILFCASV
PNPLFDLAGITCGHFLVPFWKFFVATLIGKALIKATIQQLFVIASLTESL
VDRFVVGLGKLPYLGPPMQRMIRELLQSTKQQMHGTVNSNSLAYLSHLVR
AFELCAFIMVTCFVVSSLNCLAQIHCKRQQEKKRKMRNLEMILYADTETS
SSEEFSV*

BS14223.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32087-PA 407 CG32087-PA 1..407 1..407 2135 100 Plus
Tango5-PB 428 CG32675-PB 7..399 2..382 951 51.5 Plus
Tango5-PE 530 CG32675-PE 109..501 2..382 951 51.5 Plus
Tango5-PF 530 CG32675-PF 109..501 2..382 951 51.5 Plus
Tango5-PD 530 CG32675-PD 109..501 2..382 951 51.5 Plus