Clone Sequence Records
BS14225.3prime Sequence
396 bp (396 high quality bases) assembled on 2006-10-13
> BS14225.3prime
ATGGTCTAGAAAGCTTCTAGCACATGTACAGCTTGGAGGGCTTCATTCGG
CCGTACTCCCCGTTCTCGGTGACCGCAACTTTGAGGCCCGTAATGCCGTC
TTGCTCCAGCATCTTCAGATCCTCCAAACCTTCCGCAACCTCCTGGGCGG
TAACCACGAACTTCTTTGCCAGGCGCCTGCGGTTGGCGTACTTGAGGAAG
TGGCCGTCGCCGTACCGCTGGCGACTCGTCAGATAGATCTGGTCAATCCG
CTGATAATGGCAGCACTGCATCTTAGGGTACCACGCGAAAGTCTCCTGCC
AGTGCCTCGTCGTCCTTTCCATGGCATGACTGAAGGCGAGCTGGTAGCGC
AGCTGCTCCGTGGTCACTATGTCCGCCGGCATGTCGACTGATAACT
BS14225.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-PA | 366 | CG3611-RA | 1..366 | 382..17 | 1805 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-RB | 1126 | CG3611-RB | 253..618 | 382..17 | 1815 | 99.7 | Minus |
CG3611-RC | 1919 | CG3611-RC | 253..618 | 382..17 | 1815 | 99.7 | Minus |
CG3611-RA | 765 | CG3611-RA | 313..678 | 382..17 | 1815 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:01:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24799110..24799475 | 382..17 | 1815 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:01:09 has no hits.
BS14225.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:16 Download gff for
BS14225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-PA | 1..366 | 17..382 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:42:56 Download gff for
BS14225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:40:30 Download gff for
BS14225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:40:30 Download gff for
BS14225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24799110..24799475 | 17..382 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:42:56 Download gff for
BS14225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20686633..20686998 | 17..382 | 99 | | Minus |
BS14225.5prime Sequence
396 bp (396 high quality bases) assembled on 2006-10-13
> BS14225.5prime
GAAGTTATCAGTCGACATGCCGGCGGACATAGTGACCACGGAGCAGCTGC
GCTACCAGCTCGCCTTCAGTCATGCCATGGAAAGGACGACGAGGCACTGG
CAGGAGACTTTCGCGTGGTACCCTAAGATGCAGTGCTGCCATTATCAGCG
GATTGACCAGATCTATCTGACGAGTCGCCAGCGGTACGGCGACGGCCACT
TCCTCAAGTACGCCAACCGCAGGCGCCTGGCAAAGAAGTTCGTGGTTACC
GCCCAGGAGGTTGCGGAAGGTTTGGAGGATCTGAAGATGCTGGAGCAAGA
CGGCATTACGGGCCTCAAAGTTGCGGTCACCGAGAACGGGGAGTACGGCC
GAATGAAGCCCTCCAAGCTGTACATGTGCTAGAAGCTTTCTAGACC
BS14225.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-PA | 366 | CG3611-RA | 1..366 | 17..382 | 1805 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-RB | 1126 | CG3611-RB | 253..618 | 17..382 | 1815 | 99.7 | Plus |
CG3611-RC | 1919 | CG3611-RC | 253..618 | 17..382 | 1815 | 99.7 | Plus |
CG3611-RA | 765 | CG3611-RA | 313..678 | 17..382 | 1815 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:38:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24799110..24799475 | 17..382 | 1815 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:38:09 has no hits.
BS14225.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:16 Download gff for
BS14225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-PA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:48:26 Download gff for
BS14225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:03:44 Download gff for
BS14225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:03:44 Download gff for
BS14225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24799110..24799475 | 17..382 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:48:26 Download gff for
BS14225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20686633..20686998 | 17..382 | 99 | | Plus |
BS14225.complete Sequence
398 bp assembled on 2006-11-01
> BS14225.complete
GAAGTTATCAGTCGACATGCCGGCGGACATAGTGACCACGGAGCAGCTGC
GCTACCAGCTCGCCTTCAGTCATGCCATGGAAAGGACGACGAGGCACTGG
CAGGAGACTTTCGCGTGGTACCCTAAGATGCAGTGCTGCCATTATCAGCG
GATTGACCAGATCTATCTGACGAGTCGCCAGCGGTACGGCGACGGCCACT
TCCTCAAGTACGCCAACCGCAGGCGCCTGGCAAAGAAGTTCGTGGTTACC
GCCCAGGAGGTTGCGGAAGGTTTGGAGGATCTGAAGATGCTGGAGCAAGA
CGGCATTACGGGCCTCAAAGTTGCGGTCACCGAGAACGGGGAGTACGGCC
GAATGAAGCCCTCCAAGCTGTACATGTGCTAGAAGCTTTCTAGACCAT
BS14225.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:19:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-RB | 366 | CG3611-PB | 1..366 | 17..382 | 1815 | 99.7 | Plus |
CG3611-RC | 366 | CG3611-PC | 1..366 | 17..382 | 1815 | 99.7 | Plus |
CG3611-RA | 366 | CG3611-PA | 1..366 | 17..382 | 1815 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:19:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-RB | 1126 | CG3611-RB | 253..618 | 17..382 | 1815 | 99.7 | Plus |
CG3611-RC | 1919 | CG3611-RC | 253..618 | 17..382 | 1815 | 99.7 | Plus |
CG3611-RA | 765 | CG3611-RA | 313..678 | 17..382 | 1815 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:19:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24799110..24799475 | 17..382 | 1815 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:19:19 has no hits.
BS14225.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:38:08 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 1..366 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:17 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:30:33 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:38:08 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:15:48 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3611-RA | 313..678 | 17..382 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:15:48 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24799110..24799475 | 17..382 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:30:33 Download gff for
BS14225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20686633..20686998 | 17..382 | 99 | | Plus |
BS14225.pep Sequence
Translation from 16 to 381
> BS14225.pep
MPADIVTTEQLRYQLAFSHAMERTTRHWQETFAWYPKMQCCHYQRIDQIY
LTSRQRYGDGHFLKYANRRRLAKKFVVTAQEVAEGLEDLKMLEQDGITGL
KVAVTENGEYGRMKPSKLYMC*
BS14225.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3611-PB | 121 | CG3611-PB | 1..121 | 1..121 | 649 | 100 | Plus |
CG3611-PC | 121 | CG3611-PC | 1..121 | 1..121 | 649 | 100 | Plus |
CG3611-PA | 121 | CG3611-PA | 1..121 | 1..121 | 649 | 100 | Plus |
CG34169-PA | 124 | CG34169-PA | 5..123 | 3..121 | 171 | 31.5 | Plus |
CG34106-PB | 122 | CG34106-PB | 5..118 | 5..118 | 164 | 29.8 | Plus |