Clone Sequence Records
BS14226.complete Sequence
1187 bp assembled on 2009-12-07
GenBank Submission: KX802832
> BS14226.complete
GAAGTTATCAGTCGACATGATTAGTGGCTCTGGGAGTCGGACGCCCTCAA
ATCGACTTTATTTGTCGCCCGTTCGCCCCACGATGCAGAACAAACGGAGG
CTTCTGCGGGAGTACAGGTCCTACGATGACCTCAGCGAGCACTACCGCAT
GTTTGGATCGCAGTCCCTGGACTCGCTGCAGGATCGCGTGGACATGAATC
CCAGTGGCTGCGATGGCTTATCCACGGACGGACTCGACTTCTGCTCGCAG
TCCCACTCGGGGCTGCTGAGGGAGCACAATTTCAAGATTAAGTCCTACTA
CTACAACGTGGGGAACTGCGTACACTGCCGCAAAAGGATCCGCTTCGCCA
TGGCCAGCCTGAGGTGTCGGGCGTGTCCGCTCCGCTGCCACATCGGTTGC
TGCCGCCAGCTGACGGTGAACTGCATCCCCCAGCCTCAAATCGGTACGAA
GAGAGGATGTCTCAGCGATTATGCGCCTCGGGTGGCGCCCATGGTGCCGG
CCTTAATTGTCCATTGTGTAACGGAGATCGAGGCGCGGGGATTGCAGCAG
GAGGGACTCTACCGGGTGTCCTCCACCCGAGAGAAATGCAAACGACTGCG
TCGGAAGCTGCTGCGTGGCAAGTCCACGCCGCATTTGGGCAATAAAGACA
CCCACACACTGTGCTGTTGTGTTAAGGACTTTCTTCGGCAGTTGGTTCAC
CCTCTGATTCCCATTTACCACCGAAGGGATTTCGAGGAGGCCACGCGGCA
CGAAGATCGTCTGGCTGTGGAGATGGCGGTATATTTAGCGGTTCTGGAGC
TGCATCAGGCTCACAGGGATACGTTGGCCTACTTAATGCTTCACTGGCAG
AAAATTGCCGAAAGTCCTGCTGTCCGCATGACGGTCAACAATCTTGCCGT
GATCTTCGCTCCAACTCTGTTCGGAGATCTGGATCTAACCCTCGAAAATG
TCGTCACTTGGCAGCGGGTGCTGAAGGTGCTACTTCTGATGCCTGCCGGA
TTTTGGTCTCAGTTCTTGGAGGTCCATCCCCTTCCCACTTCGTTGGGCAG
CACCTATGACTTTGAGGACCGGTACAATCACCGTCACTGGGACAGCTCGT
CCAATCTGGGATGGTCTTCTGTTAAGACCTACTTTAGATCAATGGTCAAC
CTTAGCAGTACTCACCTATAGAAGCTTTCTAGACCAT
BS14226.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:53:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RA | 1155 | CG2595-PA | 1..1155 | 17..1171 | 5775 | 100 | Plus |
RacGAP84C-RB | 1152 | CG2595-PB | 1..1130 | 17..1146 | 5650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RA | 1412 | CG2595-RA | 144..1298 | 17..1171 | 5775 | 100 | Plus |
RacGAP84C-RB | 1354 | CG2595-RB | 144..1273 | 17..1146 | 5650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7286559..7287370 | 335..1146 | 4060 | 100 | Plus |
3R | 32079331 | 3R | 7286105..7286425 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:53:40 has no hits.
BS14226.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:50 Download gff for
BS14226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 743..1897 | 17..1171 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:00:45 Download gff for
BS14226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..1298 | 17..1171 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:02 Download gff for
BS14226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 743..1897 | 17..1171 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:22 Download gff for
BS14226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..1298 | 17..1171 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:22 Download gff for
BS14226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7286105..7286424 | 17..336 | 100 | -> | Plus |
3R | 7286561..7287368 | 337..1144 | 100 | -> | Plus |
3R | 7287489..7287515 | 1145..1171 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:00:45 Download gff for
BS14226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3111827..3112146 | 17..336 | 100 | -> | Plus |
arm_3R | 3112283..3113090 | 337..1144 | 100 | -> | Plus |
arm_3R | 3113211..3113237 | 1145..1171 | 100 | | Plus |
BS14226.5prime Sequence
508 bp (455 high quality bases) assembled on 2006-10-13
> BS14226.5prime
GAAGTTATCAGTCGACATGATTAGTGGCTCTGGGAGTCGGACGCCCTCAA
ATCGACTTTATTTGTCGCCCGTTCGCCCCACGATGCAGAACAAACGGAGG
CTTCTGCGGGAGTACAGGTCCTACGATGACCTCAGCGAGCACTACCGCAT
GTTTGGATCGCAGTCCCTGGACTCGCTGCAGGATCGCGTGGACATGAATC
CCAGTGGCTGCGATGGCTTATCCACGGACGGACTCGACTTCTGCTCGCAG
TCCCACTCGGGGCTGCTGAGGGAGCACAATTTCAAGATTAAGTCCTACTA
CTACAACGTGGGGAACTGCGTACACTGCCGCAAAAGGATCCGCTTCGCCA
TGGCCAGCCTGAGGTGTCGGGCGTGTCCGCTCCGCTGCCACATCGGTTGC
TGCCGCCAGCTGACGGTGAACTGCATCCCCCAGCCTCAAATCGGTACGAA
GAGAGGATGTCTCAGCGATTATGCGCCCTCGGGTGGCGCCCATGGTGCCG
GCCTTAAT
BS14226.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2595-PA | 1155 | RacGAP84C-RA | 1..491 | 17..508 | 2420 | 99.7 | Plus |
CG2595-PB | 1152 | RacGAP84C-RB | 1..491 | 17..508 | 2420 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RB | 1354 | CG2595-RB | 144..634 | 17..508 | 2435 | 99.8 | Plus |
RacGAP84C-RA | 1412 | CG2595-RA | 144..634 | 17..508 | 2435 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:20:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7286105..7286425 | 17..337 | 1605 | 100 | Plus |
3R | 32079331 | 3R | 7286559..7286731 | 335..508 | 820 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:20:46 has no hits.
BS14226.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:17 Download gff for
BS14226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2595-PB | 1..491 | 17..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 04:39:45 Download gff for
BS14226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..634 | 17..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:59:53 Download gff for
BS14226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 144..634 | 17..508 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:59:53 Download gff for
BS14226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7286105..7286424 | 17..336 | 100 | -> | Plus |
3R | 7286561..7286731 | 337..508 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:39:45 Download gff for
BS14226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3111827..3112146 | 17..336 | 100 | -> | Plus |
arm_3R | 3112283..3112453 | 337..508 | 99 | | Plus |
BS14226.3prime Sequence
453 bp (400 high quality bases) assembled on 2006-10-13
> BS14226.3prime
ATGGTCTAGAAAGCTTCTATCGGTGAGTACTGCTAAGGTTGACCATTGAT
CTAAAGTAGGTCTTAACAGAAGACCATCCCAGATTGGACGAGCTGTCCCA
GTGACGGTGATTGTACCGGTCCTCAAAGTCATAGGTGCTGCCCAACGAAG
TGGGAAGGGGATGGACCTCCAAGAACTGAGACCAAAATCCGGCAGGCATC
AGAAGTAGCACCTTCAGCACCCGCTGCCAAGTGACGACATTTTCGAGGGT
TAGATCCAGATCTCCGAACAGAGTTGGAGCGAAGATCACGGCAAGATTGT
TGACCGTCATGCGGACAGCAGGACTTTCGGCTATTTTCTGCCAGTGAAGC
ATTAAGTAGGCCAACGTATCCCTGTGAGCCTGATGCAGCTCCAGAACCGC
TAATTATACCGCCTTCTCCACAGCCAGACGATCTTCGTGCCGCGTGGCCT
CCT
BS14226.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2595-PA | 1155 | RacGAP84C-RA | 719..1150 | 453..22 | 2085 | 99.3 | Minus |
CG2595-PB | 1152 | RacGAP84C-RB | 719..1130 | 453..42 | 1985 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:40:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-RA | 1412 | CG2595-RA | 862..1298 | 453..17 | 2125 | 99.1 | Minus |
RacGAP84C-RB | 1354 | CG2595-RB | 862..1273 | 453..42 | 2015 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:40:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7286959..7287370 | 453..42 | 2015 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:40:47 has no hits.
BS14226.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:17 Download gff for
BS14226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2595-PA | 719..1155 | 17..453 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:17:17 Download gff for
BS14226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 862..1298 | 17..453 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:26:38 Download gff for
BS14226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RacGAP84C-RA | 862..1298 | 17..453 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:38 Download gff for
BS14226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7286959..7287368 | 44..453 | 99 | -> | Minus |
3R | 7287489..7287515 | 17..43 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:17:17 Download gff for
BS14226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3112681..3113090 | 44..453 | 99 | -> | Minus |
arm_3R | 3113211..3113237 | 17..43 | 96 | | Minus |
BS14226.pep Sequence
Translation from 16 to 1170
> BS14226.pep
MISGSGSRTPSNRLYLSPVRPTMQNKRRLLREYRSYDDLSEHYRMFGSQS
LDSLQDRVDMNPSGCDGLSTDGLDFCSQSHSGLLREHNFKIKSYYYNVGN
CVHCRKRIRFAMASLRCRACPLRCHIGCCRQLTVNCIPQPQIGTKRGCLS
DYAPRVAPMVPALIVHCVTEIEARGLQQEGLYRVSSTREKCKRLRRKLLR
GKSTPHLGNKDTHTLCCCVKDFLRQLVHPLIPIYHRRDFEEATRHEDRLA
VEMAVYLAVLELHQAHRDTLAYLMLHWQKIAESPAVRMTVNNLAVIFAPT
LFGDLDLTLENVVTWQRVLKVLLLMPAGFWSQFLEVHPLPTSLGSTYDFE
DRYNHRHWDSSSNLGWSSVKTYFRSMVNLSSTHL*
BS14226.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:53:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RacGAP84C-PA | 384 | CG2595-PA | 1..384 | 1..384 | 2062 | 100 | Plus |
RacGAP84C-PB | 383 | CG2595-PB | 1..377 | 1..377 | 2027 | 100 | Plus |
tum-PA | 625 | CG13345-PA | 312..581 | 80..341 | 679 | 48.3 | Plus |
RhoGAP5A-PA | 494 | CG3208-PA | 240..463 | 85..301 | 213 | 29.1 | Plus |
RhoGAP18B-PH | 468 | CG42274-PH | 289..440 | 158..310 | 156 | 31 | Plus |