Clone Sequence Records
BS14257.complete Sequence
1466 bp assembled on 2009-12-07
GenBank Submission: KX806456
> BS14257.complete
GAAGTTATCAGTCGACATGGCGGAACGGGAAAAGGGGCGTGCCAAGGACG
ACAGACGTTGGCAAGGCCGTTCCGATGTTCACCAATCCAAGCCGCAGATC
CGAAAGGAGCGCCGCCATCCGCCACAGCCAAATCATCCTCATGAGAAGGA
CCAGCGACAAGATCGTCGGTTCTCAGAGGAGAAGCAATCCCTACCGGAAA
TTATAGTGGCGGGAAAGTACCGTTTATTGAAGCGTATTGGAAACGGATCC
TTCGGCGAACTATTCCAGGCCGAGGGCCTCAAGTACCACGAGAAGGTGGC
CATAAAGCTGGAGAGCTCCACGGTCAAGCACCCATTGCTGCCACGCGAGG
CCAGGATCTATGGCATCCTGCAGGGCGGACTGGGCATCCCGCATGTGAAG
CACTATGCCACCGAGGGGGCGTACAATGTCATGGTGATGGACCTCCTGGG
GCCCACGCTGGAGGATCTGCTAAACCTCTGCTCGCGCTCCTTTAGCATGA
AGACCACCCTGATGCTGGCCGACCAGATCCTTGCCCGCGTGGAGCTGCTC
CACCGGAGATGCTTTATCCACCGGGACATCAAGCCGGACAACTTCCTGAT
GGGCCTGAACCGCCACCAGACTCAGGTGTACATGATTGACTTCGGACTGG
CCAAAAAGTTCTACAGCCTGCGCACCCAGAAGCACATCGGCTACACGGAG
AACCGGGACCTGGTAGGTACGGCCCGGTACGCCAGTGTGCGGGCCCATTA
CGCGGAGCAGAGTCGTCGGGATGACCTAGAGTCCGTGGGCTACCTGCTGC
TCTACTTCCAGCGGGGTCGTCTTCCCTGGCAGGGAATCCGGGCGCAGTCG
CAGGCCCAGAAGTACGAGAAGATAGCTGAGTACAAGGCCAACATCCCACT
CCAGCAACTCTGCTCCGGATTGCCTGTCGAGTTCTTCATGTATCTGAAGT
ACTGCCGCAAGCTGCACTTCGCCGAGAAGCCGGATTACGTGTATCTGCAG
CAGCTGTTCAAGGTGCTCTTCCGGAACCAGTACAAGGTGTGTGACTTCCT
CTTCGACTGGGTCGTTTTGAAGCGAGAGTCGCCGGAGCAACAATCGCAGC
AAAAGGGTAGGGAAAGGGACAGGGGTGGAAAAAGGAACGTGGTGGTGCAG
AAGGAGAGGCATCGAAACAAGGATAGGGATAGTGATACGCAGAGGTGTCG
AATTAAGAATGGGGGAGATCTGCTCGAGATCGAGGAAAATGAAAGTACCA
CTGGGGAAGACCCAAACGAAGATAAGCCTCAAAAAAAGCATGGCAAGGCC
TGCTCCTGCAGCTACCACCTCCAGAAGAAGCGCCTCCAGGATCGGGATAG
GAGGGCGCCTCTGATGACCGAGCGGAGGATCCTTTCGGGGGAGCAGGAGC
AGGAGCTGGAGCTGGAGCTGCGGGGGTCCCCTCAGATGCCCTGTCTTTGA
AAGCTTTCTAGACCAT
BS14257.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-RA | 1434 | CG12147-PA | 1..1434 | 17..1450 | 7170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:48:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-RA | 1889 | CG12147-RA | 80..1514 | 16..1450 | 7175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5425744..5427178 | 1450..16 | 7175 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:48:39 has no hits.
BS14257.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:37 Download gff for
BS14257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 81..1513 | 17..1449 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:28 Download gff for
BS14257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 81..1513 | 17..1449 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:16 Download gff for
BS14257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 81..1513 | 17..1449 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:23 Download gff for
BS14257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 81..1513 | 17..1449 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:23 Download gff for
BS14257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5425745..5427177 | 17..1449 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:28 Download gff for
BS14257.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1251467..1252899 | 17..1449 | 100 | | Minus |
BS14257.3prime Sequence
642 bp (530 high quality bases) assembled on 2006-10-13
> BS14257.3prime
ATGGTCTAGAAAGCTTTCAAAGACAGGGCATCTGAGGGGACCCCCGCAGC
TCCAGCTCCAGCTCCTGCTCCTGCTCCCCCGAAAGGATCCTCCGCTCGGT
CATCAGAGGCGCCCTCCTATCCCGATCCTGGAGGCGCTTCTTCTGGAGGT
GGTAGCTGCAGGAGCAGGCCTTGCCATGCTTTTTTTGAGGCTTATCTTCG
TTTGGGTCTTCCCCAGTGGTACTTTCATTTTCCTCGATCTCGAGCAGATC
TCCCCCATTCTTAATTCGACACCTCTGCGTATCACTATCCCTATCCTTGT
TTCGATGCCTCTCCTTCTGCACCACCACGTTCCTTTTTCCACCCCTGTCC
CTTTCCCTACCCTTTTGCTGCGATTGTTGCTCCGGCGACTCTCGCTTCAA
AACGACCCAGTCGAAGAGGAAGTCACACACCTTGTACTGGTTCCGGAAGA
GCACCTTGAACAGCTGCTGCAGATACACGTAATCCGGCTTCTCGGCGAAG
TGCAGCTTGCGGCAGTACTTCAGATACATGAAGAACTCGACAGGCAATCC
GGAGCAGAGTTGCTGGAGTGGGATGTTGGCCTTGTACTCAGCTATCTTCT
CGTACTTCTGGGGCTGCGACTGCGCCCGGATTCCCTGCCAGG
BS14257.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:56:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-PA | 1434 | CG12147-RA | 809..1434 | 642..17 | 3105 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-RA | 1889 | CG12147-RA | 889..1514 | 642..17 | 3115 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5425744..5426369 | 17..642 | 3115 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:28:08 has no hits.
BS14257.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:34 Download gff for
BS14257.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-PA | 809..1434 | 17..642 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:09:13 Download gff for
BS14257.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 889..1518 | 11..642 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:13:32 Download gff for
BS14257.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 889..1518 | 11..642 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:13:32 Download gff for
BS14257.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5425740..5426369 | 11..642 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:09:13 Download gff for
BS14257.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1251462..1252091 | 11..642 | 99 | | Plus |
BS14257.5prime Sequence
605 bp (520 high quality bases) assembled on 2006-10-13
> BS14257.5prime
GAAGTTATCAGTCGACATGGCGGAACGGGAAAAGGGGCGTGCCAAGGACG
ACAGACGTTGGCAAGGCCGTTCCGATGTTCACCAATCCAAGCCGCAGATC
CGAAAGGAGCGCCGCCATCCGCCACAGCCAAATCATCCTCATGAGAAGGA
CCAGCGACAAGATCGTCGGTTCTCAGAGGAGAAGCAATCCCTACCGGAAA
TTATAGTGGCGGGAAAGTACCGTTTATTGAAGCGTATTGGAAACGGATCC
TTCGGCGAACTATTCCAGGCCGAGGGCCTCAAGTACCACGAGAAGGTGGC
CATAAAGCTGGAGAGCTCCACGGTCAAGCACCCATTGCTGCCACGCGAGG
CCAGGATCTATGGCATCCTGCAGGGCGGACTGGGCATCCCGCATGTGAAG
CACTATGCCACCGAGGGGGCGTACAATGTCATGGTGATGGACCTCCTGGG
GCCCACGCTGGAGGATCTGCTAAACCTCTGCTCGCGCTCCTTTAGCATGA
AGACCACCCTGATGCTGGCCGACCAGATCCTTGCCCGCGTGGAGCTGCTC
CACCGGAAATGCTTTATCCACCGGGACATCAAGCCGGACAACTTCCTGAA
GGGCC
BS14257.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:56:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-PA | 1434 | CG12147-RA | 1..589 | 17..605 | 2895 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:23:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-RA | 1889 | CG12147-RA | 80..669 | 16..605 | 2920 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:23:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5426589..5427178 | 605..16 | 2920 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:23:08 has no hits.
BS14257.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:34 Download gff for
BS14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-PA | 1..589 | 17..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:39:01 Download gff for
BS14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 77..669 | 12..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:12:47 Download gff for
BS14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12147-RA | 77..669 | 12..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:12:47 Download gff for
BS14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5426589..5427181 | 12..605 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:39:01 Download gff for
BS14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1252311..1252903 | 12..605 | 99 | | Minus |
BS14257.pep Sequence
Translation from 16 to 1449
> BS14257.pep
MAEREKGRAKDDRRWQGRSDVHQSKPQIRKERRHPPQPNHPHEKDQRQDR
RFSEEKQSLPEIIVAGKYRLLKRIGNGSFGELFQAEGLKYHEKVAIKLES
STVKHPLLPREARIYGILQGGLGIPHVKHYATEGAYNVMVMDLLGPTLED
LLNLCSRSFSMKTTLMLADQILARVELLHRRCFIHRDIKPDNFLMGLNRH
QTQVYMIDFGLAKKFYSLRTQKHIGYTENRDLVGTARYASVRAHYAEQSR
RDDLESVGYLLLYFQRGRLPWQGIRAQSQAQKYEKIAEYKANIPLQQLCS
GLPVEFFMYLKYCRKLHFAEKPDYVYLQQLFKVLFRNQYKVCDFLFDWVV
LKRESPEQQSQQKGRERDRGGKRNVVVQKERHRNKDRDSDTQRCRIKNGG
DLLEIEENESTTGEDPNEDKPQKKHGKACSCSYHLQKKRLQDRDRRAPLM
TERRILSGEQEQELELELRGSPQMPCL*
BS14257.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:00:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12147-PA | 477 | CG12147-PA | 1..477 | 1..477 | 2521 | 100 | Plus |
| CkIalpha-PG | 337 | CG2028-PG | 8..312 | 56..359 | 948 | 54.8 | Plus |
| CkIalpha-PF | 337 | CG2028-PF | 8..312 | 56..359 | 948 | 54.8 | Plus |
| CkIalpha-PD | 337 | CG2028-PD | 8..312 | 56..359 | 948 | 54.8 | Plus |
| CkIalpha-PE | 337 | CG2028-PE | 8..312 | 56..359 | 948 | 54.8 | Plus |
