Clone BS14265 Report

Search the DGRC for BS14265

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:142
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG30393-RA
Protein status:BS14265.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14265.3prime Sequence

569 bp (537 high quality bases) assembled on 2006-10-13

> BS14265.3prime
ATGGTCTAGAAAGCTTTCAGAGAATTTGTGGGTTCACCGACCATCTGATT
ACTGAATCCTTTACAGTTAGCTCGTGTCGGTTGTCGGGCAGAGGAGTATG
GTAATCTTCCTTAGTAATACTTATTATAGACCTCTCACTGCGACGTTGGT
GTCTAGAGATCCTCTTCAGTTCCCTTTCGTTGTCCTGGTCTAATTCCTGA
CCGGTGCTTATGCCAGACATCTCACTGGGACGTTGGAGTCTAACTATGGA
CTTCTTTCGATCCAGTAAATTGCTCTCGGCCTCGGCCATCTTTTCGCATC
GCCTGGCACACCGCTTCTTCTTGGCCTGATTGACAAAGGTGGCGTTAAAG
TCCTCTTTCACCTGCGGATACTCGTGGGCAGGACAACGGCGCGGCATACG
CAGGCACTTGCAGAAGCTCATGTTGTACTTGAAGTAATTTGCGAAATCCT
CATTGGGTTCCAATAGCTTCTGATAGTACTCGATGCTGTTCAAGTCCAAG
GGATCCAACATGTGGGCAGCGCAGTCGAACTGTACGTGTCCACTGTAGAA
GTAGGCGAAGAGCTCCTCC

BS14265.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:45:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 1065 CG30393-RA 513..1065 569..17 2765 100 Minus
CG30391-PA 1017 CG30391-RA 513..546 569..536 145 97 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1216 CG30393-RA 577..1132 569..14 2780 100 Minus
CG30391-RA 1538 CG30391-RA 610..780 569..399 330 80.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21266448..21267003 14..569 2780 100 Plus
2R 25286936 2R 21265563..21265733 399..569 330 79.5 Plus
Blast to na_te.dros performed on 2015-02-03 06:31:55 has no hits.

BS14265.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:40 Download gff for BS14265.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-PA 513..1065 17..569 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:28:35 Download gff for BS14265.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 577..1132 14..569 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:37:14 Download gff for BS14265.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 577..1132 14..569 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:37:14 Download gff for BS14265.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21266448..21267003 14..569 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:28:35 Download gff for BS14265.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17153953..17154508 14..569 100   Plus

BS14265.5prime Sequence

628 bp (556 high quality bases) assembled on 2006-10-13

> BS14265.5prime
GAAGTTATCAGTCGACATGGAAACAACCGCTCAGCTGCAGCAATTGAAAC
CCCAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAG
TTTGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGAC
CAAGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATC
TCAAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAG
CTGACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTG
TCCGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACT
ACATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTC
ATCCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAA
GTTGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCACA
AGCCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTC
TACAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGGATCCCT
TGAACTTGAAAAGCATCAAGTACAATCA

BS14265.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 1065 CG30393-RA 1..577 17..593 2885 100 Plus
CG30391-PA 1017 CG30391-RA 266..389 282..405 270 88.7 Plus
CG30391-PA 1017 CG30391-RA 478..546 494..562 195 91.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1216 CG30393-RA 64..675 16..628 2980 99.2 Plus
CG30391-RA 1538 CG30391-RA 227..682 146..602 895 80.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21266905..21267516 628..16 2955 99.2 Minus
2R 25286936 2R 21265683..21266116 579..146 865 80 Minus
Blast to na_te.dros performed on 2015-02-11 17:25:00 has no hits.

BS14265.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:40 Download gff for BS14265.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-PA 1..610 17..627 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:21:22 Download gff for BS14265.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..674 10..627 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:09 Download gff for BS14265.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..674 10..627 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:09 Download gff for BS14265.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21266906..21267523 10..627 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:21:22 Download gff for BS14265.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17154411..17155028 10..627 98   Minus

BS14265.complete Sequence

1097 bp assembled on 2006-11-01

GenBank Submission: FJ637625

> BS14265.complete
GAAGTTATCAGTCGACATGGAAACAACCGCTCAGCTGCAGCAATTGAAAC
CCCAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAG
TTTGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGAC
CAAGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATC
TCAAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAG
CTGACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTG
TCCGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACT
ACATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTC
ATCCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAA
GTTGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCACA
AGCCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTC
TACAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGATCCCTT
GGACTTGAACAGCATCGAGTACTATCAGAAGCTATTGGAACCCAATGAGG
ATTTCGCAAATTACTTCAAGTACAACATGAGCTTCTGCAAGTGCCTGCGT
ATGCCGCGCCGTTGTCCTGCCCACGAGTATCCGCAGGTGAAAGAGGACTT
TAACGCCACCTTTGTCAATCAGGCCAAGAAGAAGCGGTGTGCCAGGCGAT
GCGAAAAGATGGCCGAGGCCGAGAGCAATTTACTGGATCGAAAGAAGTCC
ATAGTTAGACTCCAACGTCCCAGTGAGATGTCTGGCATAAGCACCGGTCA
GGAATTAGACCAGGACAACGAAAGGGAACTGAAGAGGATCTCTAGACACC
AACGTCGCAGTGAGAGGTCTATAATAAGTATTACTAAGGAAGATTACCAT
ACTCCTCTGCCCGACAACCGACACGAGCTAACTGTAAAGGATTCAGTAAT
CAGATGGTCGGTGAACCCACAAATTCTCTGAAAGCTTTCTAGACCAT

BS14265.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1065 CG30393-PA 1..1065 17..1081 5325 100 Plus
CG30391-RA 1017 CG30391-PA 130..683 146..699 1030 79.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1216 CG30393-RA 64..1132 16..1084 5345 100 Plus
CG30391-RA 1538 CG30391-RA 227..780 146..699 1030 79.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21266448..21267516 1084..16 5345 100 Minus
2R 25286936 2R 21265563..21266116 699..146 1030 79.1 Minus
Blast to na_te.dros performed on 2014-11-27 08:20:38 has no hits.

BS14265.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:36 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 17..1081 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:10:51 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..1132 10..1084 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:57:42 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 65..1128 17..1080 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:36 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 57..1132 10..1084 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:16:22 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 65..1128 17..1080 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:16:22 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21266452..21267515 17..1080 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:57:42 Download gff for BS14265.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17153957..17155020 17..1080 100   Minus

BS14265.pep Sequence

Translation from 16 to 1080

> BS14265.pep
METTAQLQQLKPQQSVMSHVTVTESDAEFAILNLDCNEGLESSVTKILVA
IEEMFCSYFEDLKKELELQKMAALTLNQLTQRYRINTKVDTSCTCPQIYE
IESDDAIINKYYIYYQVIACSNNNQGWVIHNMRPYVLLFRRECAKLNLNE
DSPFIMGDAFHKPIKFFIDLVEELFAYFYSGHVQFDCAAHMLDPLDLNSI
EYYQKLLEPNEDFANYFKYNMSFCKCLRMPRRCPAHEYPQVKEDFNATFV
NQAKKKRCARRCEKMAEAESNLLDRKKSIVRLQRPSEMSGISTGQELDQD
NERELKRISRHQRRSERSIISITKEDYHTPLPDNRHELTVKDSVIRWSVN
PQIL*

BS14265.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 354 CG30393-PA 1..354 1..354 1864 100 Plus
CG30391-PA 338 CG30391-PA 1..333 1..328 927 55.2 Plus
CG31910-PA 262 CG31910-PA 44..242 39..234 300 31.7 Plus