Clone Sequence Records
BS14283.3prime Sequence
393 bp (393 high quality bases) assembled on 2006-10-13
> BS14283.3prime
ATGGTCTAGAAAGCTTTTAATCATCGTCCAAGGTGCAGTCCCCACAGCCG
TCGCCACAATCGCCACACCCGCCGCCATCGCCGCAACATCCACCGCCGTC
ATCGCCGCAACATCCACCGCCGCCGCCTTCACCACAACATCCTTCGTCGC
AAGCGAGGCACGCGGAGCAGGCGAGTCCGCAACAGCCGCACAGGCAGAGG
AGCGGCAGGCAGATGATGAGCAGGCAGCAGAGGAGCACCATAACAACGAT
CAGGACAATAATACCGACAGCCATGCTACCCGCCTTGGCGGCCTCTGTAG
TGGTGGTGGTGGCGATCGTGGTGCTCCATGAGGATGTTTCCGTCATCCCG
CCTTCTACCGTTGATAATGTGTCATCCATGTCGACTGATAACT
BS14283.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 363 | CG13494-RA | 1..363 | 379..17 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:10:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 604 | CG13494-RA | 73..436 | 380..17 | 1820 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:10:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954410..21954773 | 17..380 | 1820 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 10:10:22 has no hits.
BS14283.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:51 Download gff for
BS14283.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-PA | 1..363 | 17..379 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:38:46 Download gff for
BS14283.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..436 | 17..380 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:24:17 Download gff for
BS14283.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..436 | 17..380 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:24:17 Download gff for
BS14283.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954410..21954773 | 17..380 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:38:46 Download gff for
BS14283.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841915..17842278 | 17..380 | 100 | | Plus |
BS14283.5prime Sequence
393 bp (393 high quality bases) assembled on 2006-10-13
> BS14283.5prime
GAAGTTATCAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGA
TGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACA
GAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGT
TGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCT
GCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGAC
GAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGG
CGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCT
GTGGGGACTGCACCTTGGACGATGATTAAAAGCTTTCTAGACC
BS14283.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 363 | CG13494-RA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:49:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 604 | CG13494-RA | 73..436 | 16..379 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:49:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954410..21954773 | 379..16 | 1820 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:49:06 has no hits.
BS14283.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:51 Download gff for
BS14283.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-PA | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:06:39 Download gff for
BS14283.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..436 | 16..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:38:39 Download gff for
BS14283.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..436 | 16..379 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:38:39 Download gff for
BS14283.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954410..21954773 | 16..379 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:06:39 Download gff for
BS14283.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841915..17842278 | 16..379 | 100 | | Minus |
BS14283.complete Sequence
395 bp assembled on 2006-11-01
GenBank Submission: FJ637630
> BS14283.complete
GAAGTTATCAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGA
TGACGGAAACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACA
GAGGCCGCCAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGT
TGTTATGGTGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCT
GCCTGTGCGGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGAC
GAAGGATGTTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGG
CGGTGGATGTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCT
GTGGGGACTGCACCTTGGACGATGATTAAAAGCTTTCTAGACCAT
BS14283.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 363 | CG13494-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-RA | 604 | CG13494-RA | 73..436 | 16..379 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:05:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21954410..21954773 | 379..16 | 1820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:05:07 has no hits.
BS14283.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:23 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:15:35 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..436 | 16..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:10 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 74..434 | 17..377 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:23 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 73..436 | 16..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:43 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13494-RA | 74..434 | 17..377 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:43 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21954412..21954772 | 17..377 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:10 Download gff for
BS14283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17841917..17842277 | 17..377 | 100 | | Minus |
BS14283.pep Sequence
Translation from 16 to 378
> BS14283.pep
MDDTLSTVEGGMTETSSWSTTIATTTTTEAAKAGSMAVGIIVLIVVMVLL
CCLLIICLPLLCLCGCCGLACSACLACDEGCCGEGGGGGCCGDDGGGCCG
DGGGCGDCGDGCGDCTLDDD*
BS14283.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:51:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13494-PA | 120 | CG13494-PA | 1..120 | 1..120 | 686 | 100 | Plus |