Clone BS14290 Report

Search the DGRC for BS14290

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:142
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG10026-RA
Protein status:BS14290.pep: full length peptide match
Sequenced Size:905

Clone Sequence Records

BS14290.complete Sequence

905 bp assembled on 2010-02-09

GenBank Submission: KX802721

> BS14290.complete
GAAGTTATCAGTCGACATGCCCACCATCGAGCACAAGCTAAACATCACCG
AGGAGGAGGTTCCGGAGCACATCCGCCGACTTGCCCAGGAGCAGGGAGAG
TGTCCCAGTTCCAAGGATAAGGTCATCGAACAATTCCGTAACTACATACT
AGAACATAATGAATGCCAACCACACAGAAGTGATGCGAAGTACCTGGAGA
AATTCCTAAGAGCCCGCTACTGGAAAATCGAGAACAGTTACAAATTGCTC
TGCAGTTACTACAGGTTTCGGGAGCAGAACAAAAGCTTTTATGAGAAGGT
TCGTCCTCTGGACCTGAGACATGTTGGGCAATCGGACATCCTGACAGTGA
CTCCCTATCGGGATCAACATGGCCATAGGATACTCATCTACCGATTCGGA
CTGTGGCGACCCAATCAAGTAACCGTCGACGATATATTTCGCGCCACCAT
TGTCCTGCAGGAACTGGGCAGCCTGGAACCCATCTCACAGATTGTCGGAG
GAGTGGGAATATTCGATCTGAAGGACCTGGGCTTGGAACACATACTCCAC
CTGAGTCCCAGCGTGGCTCAGAAGATGATTGCTCTACTAGTGACCTCCAT
GCCCATTAGAACATCCGCCCTTCATATTGTAAATCAGAATTGGGTCTTCA
ACGCGGCATTCAAGATATTTAAACCTTTCCTCAACGCCGCTATGCGAGAA
AAGCTATACATCCATGGCAGTGACATGACTTCCCTGCACAAACACATCAA
CCCAGAACATCTTCCCAAGCGCTATGGTGGCTTGCACGAGGACTACTCTT
ATACGCTCTGGTTGGATATGCTGAAGGAGCAGTGTTCGGGCAATAGTATC
CAAAAGGATATGGAGCAATTGGGATTCATCTTTGACTAGAAGCTTTCTAG
ACCAT

BS14290.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-RB 900 CG10026-PB 27..900 16..889 4370 100 Plus
CG10026-RD 873 CG10026-PD 1..873 17..889 4365 100 Plus
CG10026-RC 873 CG10026-PC 1..873 17..889 4365 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-RD 1143 CG10026-RD 140..1013 16..889 4370 100 Plus
CG10026-RC 1207 CG10026-RC 204..1077 16..889 4370 100 Plus
CG10026-RB 1533 CG10026-RB 530..1403 16..889 4370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:23:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19456823..19457168 247..592 1730 100 Plus
2L 23513712 2L 19457227..19457406 592..771 900 100 Plus
2L 23513712 2L 19456432..19456568 16..152 685 100 Plus
2L 23513712 2L 19457475..19457593 771..889 595 100 Plus
2L 23513712 2L 19456628..19456724 151..247 485 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:23:34 has no hits.

BS14290.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:15 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 27..900 16..889 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:49 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
CG10026-RC 205..1077 17..889 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:23 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 531..1403 17..889 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:29:35 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
CG10026-RC 205..1077 17..889 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:32 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 531..1403 17..889 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:32 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19456433..19456568 17..152 100 -> Plus
2L 19456630..19456724 153..247 100 -> Plus
2L 19456824..19457168 248..592 100 -> Plus
2L 19457228..19457406 593..771 100 -> Plus
2L 19457476..19457593 772..889 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:23 Download gff for BS14290.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19456433..19456568 17..152 100 -> Plus
arm_2L 19456630..19456724 153..247 100 -> Plus
arm_2L 19456824..19457168 248..592 100 -> Plus
arm_2L 19457228..19457406 593..771 100 -> Plus
arm_2L 19457476..19457593 772..889 100   Plus

BS14290.3prime Sequence

569 bp (511 high quality bases) assembled on 2006-10-13

> BS14290.3prime
ATGGTCTAGAAAGCTTCTAGTCAAAGATGAATCCCAATTGCTCCATATCC
TTTTGGATACTATTGCCCGAACACTGCTCCTTCAGCATATCCAACCAGAG
CGTATAAGAGTAGTCCTCGTGCAAGCCACCATAGCGCTTGGGAAGATGTT
CTGGGTTGATGTGTTTGTGCAGGGAAGTCATGTCACTGCCATGGATGTAT
AGCTTTTCTCGCATAGCGGCGTTGAGGAAAGGTTTAAATATCTTGAATGC
CGCGTTGAAGACCCAATTCTGATTTACAATATGAAGGGCGGATGTTCTAA
TGGGCATGGAGGTCACTAGTAGAGCAATCATCTTCTGAGCCACGCTGGGA
CTCAGGTGGAGTATGTGTTCCAAGCCCAGGTCCTTCAGATCGAATATTCC
CACTCCTCCGACAATCTGTGAGATGGGTTCCAGGCTGCCCAGTTCCTGCA
GGACAATGGTGGCGCGAAATATATCGTCGACGGTTACTTGATTGGGTCGC
CACAGTCCGAATCGGTAGATGAATATCCTATGGCCATGTTGATCCCGATA
GGGAGTCACTGTCAGGATG

BS14290.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-PA 873 CG10026-RA 321..873 569..17 2740 99.8 Minus
CG10026-PB 900 CG10026-RB 348..900 569..17 2740 99.8 Minus
CG10026-PC 873 CG10026-RC 321..873 569..17 2740 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-RD 1143 CG10026-RD 461..1013 569..17 2750 99.8 Minus
CG10026-RC 1207 CG10026-RC 525..1077 569..17 2750 99.8 Minus
CG10026-RB 1533 CG10026-RB 851..1403 569..17 2750 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19456913..19457168 569..314 1265 99.6 Minus
2L 23513712 2L 19457227..19457406 314..135 900 100 Minus
2L 23513712 2L 19457475..19457593 135..17 595 100 Minus
Blast to na_te.dros performed on 2015-02-11 22:23:29 has no hits.

BS14290.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:56 Download gff for BS14290.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10026-PC 321..873 17..569 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 04:40:01 Download gff for BS14290.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 851..1407 11..569 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:00:27 Download gff for BS14290.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 851..1407 11..569 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:00:27 Download gff for BS14290.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19456913..19457168 314..569 99 -> Minus
2L 19457228..19457406 135..313 100 -> Minus
2L 19457476..19457597 11..134 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:40:01 Download gff for BS14290.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19456913..19457168 314..569 99 -> Minus
arm_2L 19457228..19457406 135..313 100 -> Minus
arm_2L 19457476..19457597 11..134 98   Minus

BS14290.5prime Sequence

594 bp (525 high quality bases) assembled on 2006-10-13

> BS14290.5prime
GAAGTTATCAGTCGACATGCCCACCATCGAGCACAAGCTAAACATCACCG
AGGAGGAGGTTCCGGAGCACATCCGCCGACTTGCCCAGGAGCAGGGAGAG
TGTCCCAGTTCCAAGGATAAGGTCATCGAACAATTCCGTAACTACATACT
AGAACATAATGAATGCCAACCACACAGAAGTGATGCGAAGTACCTGGAGA
AATTCCTAAGAGCCCGCTACTGGAAAATCGAGAACAGTTACAAATTGCTC
TGCAGTTACTACAGGTTTCGGGAGCAGAACAAAAGCTTTTATGAGAAGGT
TCGTCCTCTGGACCTGAGACATGTTGGGCAATCGGACATCCTGACAGTGA
CTCCCTATCGGGATCAACATGGCCATAGGATACTCATCTACCGATTCGGA
CTGTGGCGACCCAATCAAGTAACCGTCGACGATATATTTCGCGCCACCAT
TGTCCTGCAGGAACTGGGCAGCCTGGAACCCATCTCACAGATTGTCGGAG
GAGTGGGAATATTCGATCTGAAGGACCTGGGCTTGGAACACATACTCCAC
CTGAGTCCCAGCGTGGCTCAGAAGATGATTGCTCTACTAATGAC

BS14290.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-PB 900 CG10026-RB 27..600 16..589 2870 100 Plus
CG10026-PA 873 CG10026-RA 1..573 17..589 2865 100 Plus
CG10026-PC 873 CG10026-RC 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 02:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-RD 1143 CG10026-RD 140..718 16..594 2880 99.8 Plus
CG10026-RC 1207 CG10026-RC 204..782 16..594 2880 99.8 Plus
CG10026-RB 1533 CG10026-RB 530..1108 16..594 2880 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 02:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19456823..19457165 247..589 1715 100 Plus
2L 23513712 2L 19456432..19456568 16..152 685 100 Plus
2L 23513712 2L 19456628..19456724 151..247 485 100 Plus
Blast to na_te.dros performed on 2015-02-05 02:19:51 has no hits.

BS14290.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:56 Download gff for BS14290.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10026-PB 27..605 16..594 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:10:13 Download gff for BS14290.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 530..1108 16..594 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 03:04:25 Download gff for BS14290.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10026-RB 530..1108 16..594 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 03:04:25 Download gff for BS14290.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19456432..19456568 16..152 100 -> Plus
2L 19456630..19456724 153..247 100 -> Plus
2L 19456824..19457168 248..594 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:10:13 Download gff for BS14290.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19456432..19456568 16..152 100 -> Plus
arm_2L 19456630..19456724 153..247 100 -> Plus
arm_2L 19456824..19457168 248..594 99   Plus

BS14290.pep Sequence

Translation from 16 to 888

> BS14290.pep
MPTIEHKLNITEEEVPEHIRRLAQEQGECPSSKDKVIEQFRNYILEHNEC
QPHRSDAKYLEKFLRARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDL
RHVGQSDILTVTPYRDQHGHRILIYRFGLWRPNQVTVDDIFRATIVLQEL
GSLEPISQIVGGVGIFDLKDLGLEHILHLSPSVAQKMIALLVTSMPIRTS
ALHIVNQNWVFNAAFKIFKPFLNAAMREKLYIHGSDMTSLHKHINPEHLP
KRYGGLHEDYSYTLWLDMLKEQCSGNSIQKDMEQLGFIFD*

BS14290.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG10026-PD 290 CG10026-PD 1..290 1..290 1542 100 Plus
CG10026-PC 290 CG10026-PC 1..290 1..290 1542 100 Plus
CG10026-PA 290 CG10026-PA 1..290 1..290 1542 100 Plus
CG10026-PB 299 CG10026-PB 10..299 1..290 1542 100 Plus
CG5973-PF 311 CG5973-PF 23..272 7..255 406 35.3 Plus