Clone Sequence Records
BS14292.3prime Sequence
470 bp (440 high quality bases) assembled on 2006-10-13
> BS14292.3prime
ATGGTCTAGAAAGCTTCTAGCACTGGGCGGCGGCATTCTGCTGCTTCTTC
TTCAGCACACAGTCAATGGCCTGGACGACTTCCAGAAAGATGTCGTCCAC
GTCACGCTCGGCATTGATCGTAAGGGTCTTGGGCTCATAAAGTTCCAAAA
TTGCATTGGTGTTCTGCTTGAAGGTCAGGAGGCGTGCCCTAATGGTCTTC
TCGTTGTCATCGTCCCGTTTCACCGCCGAGGCAGCGGCACGTGCCATGAT
GCGCTGCACCATCGTGTCCTCGGAGCACTCAAAGTACAGCGCCAGATCGG
CGGGTGCAATGCGCGCCTCGAACTCAATGCCCTGGTTCTTCTGACGCGGA
TATCCATCGATGAGGAATCCCTTCGAGCTACCCTTGGCCCGCGTGATGGC
GTCGTTCAGCAGGGACAGCACCTCGTCGTTGGACACCAGGCCACCGCTGG
CCATCACAGCCTGCAGCTGA
BS14292.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17146-PA | 606 | Adk1-RA | 153..606 | 470..17 | 2245 | 99.7 | Minus |
| CG17146-PB | 690 | Adk1-RB | 237..690 | 470..17 | 2245 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adk1-RB | 1266 | CG17146-RB | 598..1051 | 470..17 | 2255 | 99.8 | Minus |
| Adk1-RA | 963 | CG17146-RA | 367..820 | 470..17 | 2255 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12200712..12201063 | 119..470 | 1745 | 99.7 | Plus |
| 3L | 28110227 | 3L | 12200537..12200639 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:14:04 has no hits.
BS14292.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:57 Download gff for
BS14292.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17146-PB | 238..690 | 17..469 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:40:07 Download gff for
BS14292.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 368..830 | 7..469 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:55:40 Download gff for
BS14292.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 368..830 | 7..469 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:55:40 Download gff for
BS14292.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12200527..12200638 | 7..118 | 96 | <- | Plus |
| 3L | 12200712..12201062 | 119..469 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:40:07 Download gff for
BS14292.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12193627..12193738 | 7..118 | 96 | <- | Plus |
| arm_3L | 12193812..12194162 | 119..469 | 99 | | Plus |
BS14292.5prime Sequence
438 bp (417 high quality bases) assembled on 2006-10-13
> BS14292.5prime
GAAGTTATCAGTCGACATGGCTGATATACCCATCATCTGGATCTTGGGTG
GACCCGGGTGCGGCAAGGGCACTCAGTGCGCCAAAATCGTGGAAAAATAC
GGATTCACACATCTGAGCAGCGGCGATTTGCTGCGCAATGAGGTGGCTTC
TGGATCGGACAAGGGTCGTCAGCTGCAGGCTGTGATGGCCAGCGGTGGCC
TGGTGTCCAACGACGAGGTGCTGTCCCTGCTGAACGACGCCATCACGCGG
GCCAAGGGTAGCTCGAAGGGATTCCTCATCGATGGATATCCGCGTCAGAA
GAACCAGGGCATTGAGTTCGAGGCGCGCATTGCACCCGCCGATCTGGCGC
TGTACTTTGAGTGCTCCGAGGACACGATGGTGCAACGCATCATGGCACGT
GCCGCTGCCTCGGCGGTGAAACGGGACGATGACAACGA
BS14292.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17146-PA | 606 | Adk1-RA | 1..422 | 17..438 | 2085 | 99.7 | Plus |
| CG17146-PB | 690 | Adk1-RB | 88..506 | 20..438 | 2070 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:38:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adk1-RA | 963 | CG17146-RA | 214..636 | 16..438 | 2100 | 99.8 | Plus |
| Adk1-RB | 1266 | CG17146-RB | 449..867 | 20..438 | 2080 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:38:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12200794..12201091 | 438..141 | 1475 | 99.7 | Minus |
| 3L | 28110227 | 3L | 12201372..12201497 | 144..19 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:38:03 has no hits.
BS14292.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:57 Download gff for
BS14292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17146-PA | 1..421 | 17..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:39:19 Download gff for
BS14292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 206..635 | 7..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:56:04 Download gff for
BS14292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 206..635 | 7..437 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:56:04 Download gff for
BS14292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12200795..12201089 | 143..437 | 99 | <- | Minus |
| 3L | 12201374..12201498 | 17..142 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:39:19 Download gff for
BS14292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12193895..12194189 | 143..437 | 99 | <- | Minus |
| arm_3L | 12194474..12194598 | 17..142 | 99 | -> | Minus |
BS14292.complete Sequence
638 bp assembled on 2006-11-01
GenBank Submission: FJ637631
> BS14292.complete
GAAGTTATCAGTCGACATGGCTGATATACCCATCATCTGGATCTTGGGTG
GACCCGGGTGCGGCAAGGGCACTCAGTGCGCCAAAATCGTGGAAAAATAC
GGATTCACACATCTGAGCAGCGGCGATTTGCTGCGCAATGAGGTGGCTTC
TGGATCGGACAAGGGTCGTCAGCTGCAGGCTGTGATGGCCAGCGGTGGCC
TGGTGTCCAACGACGAGGTGCTGTCCCTGCTGAACGACGCCATCACGCGG
GCCAAGGGTAGCTCGAAGGGATTCCTCATCGATGGATATCCGCGTCAGAA
GAACCAGGGCATTGAGTTCGAGGCGCGCATTGCACCCGCCGATCTGGCGC
TGTACTTTGAGTGCTCCGAGGACACGATGGTGCAGCGCATCATGGCACGT
GCCGCTGCCTCGGCGGTGAAACGGGACGATGACAACGAGAAGACCATTAG
GGCACGCCTCCTGACCTTCAAGCAGAACACCAATGCAATTTTGGAACTTT
ATGAGCCCAAGACCCTTACGATCAATGCCGAGCGTGACGTGGACGACATC
TTTCTGGAAGTCGTCCAGGCCATTGACTGTGTGCTGAAGAAGAAGCAGCA
GAATGCCGCCGCCCAGTGCTAGAAGCTTTCTAGACCAT
BS14292.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adk1-RA | 606 | CG17146-PA | 1..606 | 17..622 | 3015 | 99.8 | Plus |
| Adk1-RB | 690 | CG17146-PB | 88..690 | 20..622 | 3000 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:41:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adk1-RA | 963 | CG17146-RA | 214..820 | 16..622 | 3020 | 99.8 | Plus |
| Adk1-RB | 1266 | CG17146-RB | 449..1051 | 20..622 | 3000 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12200712..12201091 | 520..141 | 1885 | 99.7 | Minus |
| 3L | 28110227 | 3L | 12201372..12201497 | 144..19 | 630 | 100 | Minus |
| 3L | 28110227 | 3L | 12200537..12200639 | 622..520 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:41:45 has no hits.
BS14292.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:23:48 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 1..606 | 17..622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:55:17 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 353..977 | 7..632 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:57:39 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 215..820 | 17..622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:23:48 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 353..977 | 7..632 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:57 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk1-RA | 215..820 | 17..622 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:57 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12200537..12200638 | 521..622 | 100 | <- | Minus |
| 3L | 12200712..12201089 | 143..520 | 99 | <- | Minus |
| 3L | 12201374..12201498 | 17..142 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:57:39 Download gff for
BS14292.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12193637..12193738 | 521..622 | 100 | <- | Minus |
| arm_3L | 12193812..12194189 | 143..520 | 99 | <- | Minus |
| arm_3L | 12194474..12194598 | 17..142 | 99 | | Minus |
BS14292.pep Sequence
Translation from 16 to 621
> BS14292.pep
MADIPIIWILGGPGCGKGTQCAKIVEKYGFTHLSSGDLLRNEVASGSDKG
RQLQAVMASGGLVSNDEVLSLLNDAITRAKGSSKGFLIDGYPRQKNQGIE
FEARIAPADLALYFECSEDTMVQRIMARAAASAVKRDDDNEKTIRARLLT
FKQNTNAILELYEPKTLTINAERDVDDIFLEVVQAIDCVLKKKQQNAAAQ
C*
BS14292.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adk1-PA | 201 | CG17146-PA | 1..201 | 1..201 | 1018 | 100 | Plus |
| Adk1-PB | 229 | CG17146-PB | 30..229 | 2..201 | 1013 | 100 | Plus |
| Dak1-PA | 253 | CG6092-PA | 65..244 | 6..182 | 288 | 36.6 | Plus |
| Adk2-PA | 240 | CG3140-PA | 23..234 | 9..194 | 238 | 29 | Plus |
| CG9541-PC | 616 | CG9541-PC | 328..491 | 5..176 | 165 | 28.4 | Plus |
