Clone BS14294 Report

Search the DGRC for BS14294

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:142
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG9945-RA
Protein status:BS14294.pep: full length peptide match
Sequenced Size:1568

Clone Sequence Records

BS14294.complete Sequence

1568 bp assembled on 2009-12-07

GenBank Submission: KX802592

> BS14294.complete
GAAGTTATCAGTCGACATGGGGAACCAATTGGCTATACAGATGAATAGCG
ATGAAGACGACGATTTTGATTCTTCGGACAACGAGCTGGGCTTCAACGTG
ATCAACTTTACGGTGAACGCCATGGATCTGCGCTCCGATTATTGCAGCAG
CGAGATGCCAGTTATACGAGGCAAGCCCGATCTAGTTAAATTTCAGAAAA
CTGATATGTACAAGGAGATCCAGGCGTCGAGTGGATTAGTGAGCAATCCG
AACAATCGCTGGAACCTGGTGCACGCCCTTCAGCAGCGTGAGAATGGGTT
GGCATCGCCGCACAGCGCATCGTTCTCCAAGAACCAGCAGCGCTACATAT
CCAATCTTTACATACCAAACAAAAAGGCCACACGCCTGATGTCGCTGGAA
TCCAAAATATTTGTGACCAAGTTCAATCGTTCGGGCAGCAAGTTGCTGAC
CGCTTGTCAAGATGGCTTTGTGCGCATTTACGATGGCGCCAAGGGCACTT
ATCACCTGCTGAATCGCATCCGAGCCCGCGATGTTGAGTGGAGCATCATC
GATGCGGATTTTAGTCCGAATGGCGAGCACTTCGCCTACAGCACCTGGTC
CCGCTCATTGTTCATCATGCCCGTGAATGGGGGGGAAGACGACTGCCAGT
GGATCGATGTCAATGGACTGCCAAGCCATAGGTTGGCCATCTTCTCGCTG
CGCTATTCGCCAACAGGCGACAAAATCATCGGGGGCAGCAACAATTCCAC
GGTCATCGTGACCGACATTCGCACAAGAAACACACAGATCCTGCGCACCC
ACCGCATGCCCGGCAAGGATGTTAACTCGGTGTGCTTCCTACACGATAAG
GATCCAAATGTGATAATCGCCGGCTGTGACGACGGCCTGCTAAAGGTCTA
CGACCTGCGCACCACCTTCCGTTCACGGGACCTGTCCAAGTCTGTGGCAT
CCTTCATCGGCCACTACGATGGCATCACCTACATCGATTCGCGCAACGAC
GGCTACCACGTGCTGTCCAACTCCAAAGACCAAAGCATCAAAATCTGGGA
CATAAGGCAGCCGAGCAATATGCGTAATCGCAGTCGTTCTAGACAGCAAG
TCGACCCCACCACATGGGACTACCGATGGAACCGCGTTCCGCGGGAATTT
TACAATCCGCATAAGCCACTGGAAGGAGACTCCAGCATAATGACCTACCG
CGGTCACCGAGTTACCAAAACCCTGTTGCGGGCGAAGTTCTCACCCATGG
AGCAGACAGGGCAACGCTACATTTACACAGGCTGTGCCACCGGACGTATT
ATAATTTATGATGTACTTACTGGTAAGATTCAAGAGGCTATTGAAGGACA
TAGGACTGTGATAAGAGATCTGGACTGGCATCCGGATCGCTCAGAAATCG
TGTCTGGCTCGTGGGACACCCATGTTCACCTGAACAACTTCAGCCGCAGC
AACGCCAATCGTCCGGTAAAGCGATCACATAGCTCGGATCATGACAAAAA
GCCCCTGAGAAGATCACGCCGTTTGGCGAATCGCAATGTAACACCGGACT
AGAAGCTTTCTAGACCAT

BS14294.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:37:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1536 CG9945-PA 1..1536 17..1552 7635 99.8 Plus
CG9945-RB 1536 CG9945-PB 1..1536 17..1552 7635 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1925 CG9945-RA 207..1742 17..1552 7635 99.8 Plus
CG9945-RB 1949 CG9945-RB 81..1616 17..1552 7635 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20619476..20620019 605..1148 2705 99.8 Plus
2R 25286936 2R 20618953..20619220 194..461 1340 100 Plus
2R 25286936 2R 20618709..20618888 17..196 900 100 Plus
2R 25286936 2R 20620080..20620235 1149..1304 780 100 Plus
2R 25286936 2R 20619279..20619427 460..608 745 100 Plus
2R 25286936 2R 20620607..20620748 1411..1552 665 97.9 Plus
2R 25286936 2R 20620438..20620544 1305..1411 535 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:37:54 has no hits.

BS14294.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:16 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RA 1..1536 17..1552 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:00 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RA 207..1742 17..1552 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:13 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 81..1616 17..1552 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:44:47 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RA 207..1742 17..1552 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:10 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 81..1616 17..1552 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:10 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20618956..20619220 197..461 100 -> Plus
2R 20619281..20619427 462..608 100 -> Plus
2R 20619480..20620019 609..1148 100 -> Plus
2R 20620080..20620235 1149..1304 100 -> Plus
2R 20620438..20620544 1305..1411 100 -> Plus
2R 20620608..20620748 1412..1552 97   Plus
2R 20618709..20618888 17..196 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:13 Download gff for BS14294.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16507585..16507740 1149..1304 100 -> Plus
arm_2R 16507943..16508049 1305..1411 100 -> Plus
arm_2R 16508113..16508253 1412..1552 97   Plus
arm_2R 16506214..16506393 17..196 100 -> Plus
arm_2R 16506461..16506725 197..461 100 -> Plus
arm_2R 16506786..16506932 462..608 100 -> Plus
arm_2R 16506985..16507524 609..1148 100 -> Plus

BS14294.3prime Sequence

678 bp (539 high quality bases) assembled on 2006-10-13

> BS14294.3prime
ATGGTCTAGAAAGCTTCTAGTCCGGTGTTACATTGCGATTCGCCAAACGG
CGTGATCTTCTCAGGGGCTTTTTGTCATGATCCGAGCTATGTGATCGCTT
TACCGGACGATTGGCGTTGCTGCGGCTGAAGTTGTTCAGGTGAACATGGG
TGTCCCACGAGCCAGACACGATTTCTGAGCGATCCGGATGCCAGTCCAGA
TCTCTTATCACAGTCCTATGTCCTTCAATAGCCTCTTGAATCTTACCAGT
AAGTACATCATAAATTATAATACGTCCGGTGGCACAGCCTGTGTAAATGT
AGCGTTGCCCTGTCTGCTCCATGGGTGAGAACTTCGCCCGCAACAGGGTT
TTGGTAACTCGGTGACCGCGGTAGGTCATTATGCTGGAGTCTCCTTCCAG
TGGCTTATGCGGATTGTAAAATTCCCGCGGAACGCGGTTCCATCGGTAGT
CCCATGTGGTGGGGTCGACTTGCTGTCTAGAACGACTGCGATTACGCATA
TTGCTCGGCTGCCTTATGTCCCAGATTTTGATGCTTTGGTCTTTGGAGTT
GGACAGCACGTGGTAGCCGTCGTTGCGCGAATCGATGTAGGTGATGCCAT
CGTAGTGGCCGATGAAGGATGCCACCGACTTGGACAGGTCCCGTGAACGG
AAGGTGGTGCGCAAGTCGTAAACCTTTA

BS14294.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-PB 1536 CG9945-RB 875..1536 678..17 3160 99 Minus
CG9945-PA 1536 CG9945-RA 875..1536 678..17 3160 99 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:31:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1925 CG9945-RA 1081..1742 678..17 3220 99.1 Minus
CG9945-RB 1949 CG9945-RB 955..1616 678..17 3220 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20619762..20620019 678..421 1245 98.8 Minus
2R 25286936 2R 20620080..20620235 420..265 780 100 Minus
2R 25286936 2R 20620607..20620748 158..17 665 97.9 Minus
2R 25286936 2R 20620438..20620544 264..158 535 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:31:51 has no hits.

BS14294.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:58 Download gff for BS14294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-PA 876..1536 17..677 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:45:22 Download gff for BS14294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 956..1616 17..677 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:29:16 Download gff for BS14294.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 956..1616 17..677 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:29:16 Download gff for BS14294.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 20620608..20620748 17..157 97   Minus
2R 20619763..20620019 421..677 98 -> Minus
2R 20620080..20620235 265..420 100 -> Minus
2R 20620438..20620544 158..264 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:45:22 Download gff for BS14294.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16507268..16507524 421..677 98 -> Minus
arm_2R 16507585..16507740 265..420 100 -> Minus
arm_2R 16507943..16508049 158..264 100 -> Minus
arm_2R 16508113..16508253 17..157 97   Minus

BS14294.5prime Sequence

626 bp (583 high quality bases) assembled on 2006-10-13

> BS14294.5prime
GAAGTTATCAGTCGACATGGGGAACCAATTGGCTATACAGATGAATAGCG
ATGAAGACGACGATTTTGATTCTTCGGACAACGAGCTGGGCTTCAACGTG
ATCAACTTTACGGTGAACGCCATGGATCTGCGCTCCGATTATTGCAGCAG
CGAGATGCCAGTTATACGAGGCAAGCCCGATCTAGTTAAATTTCAGAAAA
CTGATATGTACAAGGAGATCCAGGCGTCGAGTGGATTAGTGAGCAATCCG
AACAATCGCTGGAACCTGGTGCACGCCCTTCAGCAGCGTGAGAATGGGTT
GGCATCGCCGCACAGCGCATCGTTCTCCAAGAACCAGCAGCGCTACATAT
CCAATCTTTACATACCAAACAAAAAGGCCACACGCCTGATGTCGCTGGAA
TCCAAAATATTTGTGACCAAGTTCAATCGTTCGGGCAGCAAGTTGCTGAC
CGCTTGTCAAGATGGCTTTGTGCGCATTTACGATGGCGCCAAGGGCACTT
ATCACCTGCTGAATCGCATCCGAGCCCGCGATGTTGAGTGGAGCATCATC
GATGCGGATTTTAGTCCGAATGGCGAGCACTTCGCCTACAGCACCTGGTC
CCGCTCATTGTTCATCATGCCCGTGA

BS14294.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-PB 1536 CG9945-RB 1..610 17..626 3050 100 Plus
CG9945-PA 1536 CG9945-RA 1..610 17..626 3050 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-RA 1925 CG9945-RA 207..816 17..626 3050 100 Plus
CG9945-RB 1949 CG9945-RB 81..690 17..626 3050 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20618953..20619220 194..461 1340 100 Plus
2R 25286936 2R 20618709..20618888 17..196 900 100 Plus
2R 25286936 2R 20619279..20619427 460..608 745 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:08:59 has no hits.

BS14294.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:49:58 Download gff for BS14294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-PA 1..609 17..625 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:41:50 Download gff for BS14294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 77..689 10..625 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:08:22 Download gff for BS14294.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9945-RB 77..689 10..625 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:08:22 Download gff for BS14294.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20618956..20619220 197..461 100 -> Plus
2R 20619281..20619427 462..608 100 -> Plus
2R 20619480..20619496 609..625 100   Plus
2R 20618705..20618888 10..196 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:41:50 Download gff for BS14294.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16506786..16506932 462..608 100 -> Plus
arm_2R 16506985..16507001 609..625 100   Plus
arm_2R 16506210..16506393 10..196 97 -> Plus
arm_2R 16506461..16506725 197..461 100 -> Plus

BS14294.pep Sequence

Translation from 16 to 1551

> BS14294.pep
MGNQLAIQMNSDEDDDFDSSDNELGFNVINFTVNAMDLRSDYCSSEMPVI
RGKPDLVKFQKTDMYKEIQASSGLVSNPNNRWNLVHALQQRENGLASPHS
ASFSKNQQRYISNLYIPNKKATRLMSLESKIFVTKFNRSGSKLLTACQDG
FVRIYDGAKGTYHLLNRIRARDVEWSIIDADFSPNGEHFAYSTWSRSLFI
MPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIGGSNNSTVIVTD
IRTRNTQILRTHRMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTT
FRSRDLSKSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSIKIWDIRQPS
NMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTYRGHRVT
KTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVIR
DLDWHPDRSEIVSGSWDTHVHLNNFSRSNANRPVKRSHSSDHDKKPLRRS
RRLANRNVTPD*

BS14294.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG9945-PA 511 CG9945-PA 1..511 1..511 2719 100 Plus
CG9945-PB 511 CG9945-PB 1..511 1..511 2719 100 Plus
CG3436-PC 347 CG3436-PC 9..342 129..472 225 26 Plus
CG3436-PA 347 CG3436-PA 9..342 129..472 225 26 Plus
wds-PB 361 CG17437-PB 80..347 182..465 174 22.9 Plus