Clone Sequence Records
BS14332.3prime Sequence
587 bp (537 high quality bases) assembled on 2006-10-13
> BS14332.3prime
ATGGTCTAGAAAGCTTCTACGAGTCTGGACTGAATTCGATTTCCACAAAT
CGCGGACTCCAAATATTCAAATGGATCGGCTCAAAGGAGATTTTCAAGGA
GGCACTATCAAAATCCCGTAGAACTTTACTAGGATCCAATCCAGTGTTGT
GGAGATGCAGGGTCAGTGGAATCCTGCGACTTAGCAGAACTTTTGTCAGG
CAGGAGCTTCGGAGGTCCACCAGCTTGGTAGACGATAGGTTAAGAATCCT
AAGAAGATGGCAGTGACCTATAGAGTTCCACAGGTGGCTGGGAGACGGAA
CTTCTCGCATCGCCAAAAGGTGTAGCTCCTCCAAGTTTGGCAATTTGTGG
CAGATGGTGTGCAGCTGCTGCGCATCGATGTCATCCTCCTGCAGGACCAG
CCGACGAAGATTGGTCATGTGCAGTATACTTCCCGCCACCCGTTCACTGC
TCCAGAAAGAGTCGTTGAAGAGAAGCGATTGAACCTTCAGCGGCTTGTGC
CTGGCCACCGAACCTAGCAAATACTCATAGTAGTCTCGCGTGGTAAAGGC
CAAGCGGCGGAAGTGCGGCAGATTCCTCAATCGGGGC
BS14332.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:09:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-PA | 1206 | CG13088-RA | 636..1206 | 587..17 | 2755 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:21:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-RA | 1454 | CG13088-RA | 686..1256 | 587..17 | 2795 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8489723..8490187 | 587..123 | 2265 | 99.1 | Minus |
2L | 23513712 | 2L | 8490241..8490348 | 124..17 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:21:54 has no hits.
BS14332.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:22 Download gff for
BS14332.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-PA | 636..1206 | 17..587 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:11:02 Download gff for
BS14332.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 686..1267 | 5..587 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:11:43 Download gff for
BS14332.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 686..1267 | 5..587 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:11:43 Download gff for
BS14332.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8489723..8490185 | 125..587 | 99 | -> | Minus |
2L | 8490241..8490359 | 5..124 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:11:02 Download gff for
BS14332.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8489723..8490185 | 125..587 | 99 | -> | Minus |
arm_2L | 8490241..8490359 | 5..124 | 95 | | Minus |
BS14332.5prime Sequence
565 bp (564 high quality bases) assembled on 2006-10-13
> BS14332.5prime
GAAGTTATCAGTCGACATGGAGCAAATAAATGAAGATGTTTGGATAGATA
TACTAAAGTACCTACCAATGAGGGATCAGTTGTCGCTGGTCGAAGTCAAC
GAGAATATATCGGCATACGTGAAGTATCATTGGAGTCATCTCAAAACAGT
GACTCTGACCCGCGAGGATCTGGATTTTCTGGATCGGAATAACAAGCTGA
TGCACGAATGTCTGGGTGGCTGGTCGGCAACGGTGGAGCGTTTGAATTTG
CAAAGTGCCAGCAGTGATCTGCTGAGAAAGTGGACGGAATACGACTTTCC
CCACCTCCGATCGCTCGACTGCCACATGGACTACAATCTCGAGGAGGCGG
ACGAGGAAACCCTTCTGCTAACCGAGCTGTTCCCGCTCTTGACACGGCTG
TCACTCAATAGCAGCACAACAGGTCGTTACTTGTGGCACTGGAAGCAACT
AAGGGAGTTGAATCTCACCTGGTGTGAGTACCTGGACCCAGACCACTTCG
AGGAGATCTTTGGCAACCTACAGCTGACCAAGCTGACTATGCTCTATTAC
GGATATAACGTGAAC
BS14332.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:10:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-PA | 1206 | CG13088-RA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:09:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-RA | 1454 | CG13088-RA | 51..599 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:09:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8489266..8489636 | 195..565 | 1855 | 100 | Plus |
2L | 23513712 | 2L | 8489031..8489208 | 17..194 | 890 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:09:38 has no hits.
BS14332.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:23 Download gff for
BS14332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:56:38 Download gff for
BS14332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 44..599 | 7..565 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:27:58 Download gff for
BS14332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 44..599 | 7..565 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:27:58 Download gff for
BS14332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8489024..8489208 | 7..194 | 97 | -> | Plus |
2L | 8489266..8489636 | 195..565 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:56:38 Download gff for
BS14332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8489024..8489208 | 7..194 | 97 | -> | Plus |
arm_2L | 8489266..8489636 | 195..565 | 100 | | Plus |
BS14332.complete Sequence
1238 bp assembled on 2010-05-12
GenBank Submission: KX805349
> BS14332.complete
GAAGTTATCAGTCGACATGGAGCAAATAAATGAAGATGTTTGGATAGATA
TACTAAAGTACCTACCAATGAGGGATCAGTTGTCGCTGGTCGAAGTCAAC
GAGAATATATCGGCATACGTGAAGTATCATTGGAGTCATCTCAAAACAGT
GACTCTGACCCGCGAGGATCTGGATTTTCTGGATCGGAATAACAAGCTGA
TGCACGAATGTCTGGGTGGCTGGTCGGCAACGGTGGAGCGTTTGAATTTG
CAAAGTGCCAGCAGTGATCTGCTGAGAAAGTGGACGGAATACGACTTTCC
CCACCTCCGATCGCTCGACTGCCACATGGACTACAATCTCGAGGAGGCGG
ACGAGGAAACCCTTCTGCTAACCGAGCTGTTCCCGCTCTTGACACGGCTG
TCACTCAATAGCAGCACAACAGGTCGTTACTTGTGGCACTGGAAGCAACT
AAGGGAGTTGAATCTCACCTGGTGTGAGTACCTGGACCCAGACCACTTCG
AGGAGATCTTTGGCAACCTACAGCTGACCAAGCTGACTATGCTCTATTAC
GGATATAACGTGAACCTAGGCGAAAAAGTTGTGGACATAACGCGATGTAC
CACGCTTGAAGAGCTGCACATCGATGACCACCATTTGCTGGGTGATTTCC
TGCCCCGACTGATGAATCTGCCGCACTTCCGCCGCTTGGCCTTTTACACG
CGAGACTACTATGAGTATTTGCTAGGTTCGGTGGCCAGGCACAAGCCGCT
GAAGGTTCAATCGCTTCTCTTCAACGACTCTTTCTGGAGCAGTGAACGGG
TGGCGGGAAGTATACTGCACATGACCAATCTTCGTCGGCTGGTCCTGCAG
GAGGATGACATCGATGCGCAGCAGCTGCACACCATCTGCCACAAATTGCC
AAACTTGGAGGAGCTACACCTTTTGGCGATGCGAGAAGTTCCGTCTCCCA
GCCACCTGTGGAACTCTATAGGTCACTGCCATCTTCTTAGGATTCTTAAC
CTATCGTCTACCAAGCTGGTGGACCTCCGAAGCTCCTGCCTGACAAAAGT
TCTGCTAAGTCGCAGGATTCCACTGACCCTGCATCTCCACAACACTGGAT
TGGATCCTAGTAAAGTTCTACGGGATTTTGATAGTGCCTCCTTGAAAATC
TCCTTTGAGCCGATCCATTTGAATATTTGGAGTCCGCGATTTGTGGAAAT
CGAATTCAGTCCAGACTCGTAGAAGCTTTCTAGACCAT
BS14332.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-RA | 1206 | CG13088-PA | 1..1206 | 17..1222 | 6030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:04:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-RA | 1454 | CG13088-RA | 51..1256 | 17..1222 | 6030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8489266..8490187 | 195..1116 | 4610 | 100 | Plus |
2L | 23513712 | 2L | 8489031..8489208 | 17..194 | 890 | 100 | Plus |
2L | 23513712 | 2L | 8490241..8490348 | 1115..1222 | 540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:04:31 has no hits.
BS14332.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-12 12:11:53 Download gff for
BS14332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 73..1278 | 17..1222 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:06 Download gff for
BS14332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 51..1256 | 17..1222 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:08 Download gff for
BS14332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13088-RA | 51..1256 | 17..1222 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:08 Download gff for
BS14332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8489031..8489208 | 17..194 | 100 | -> | Plus |
2L | 8489266..8490185 | 195..1114 | 100 | -> | Plus |
2L | 8490241..8490348 | 1115..1222 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:06 Download gff for
BS14332.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8489031..8489208 | 17..194 | 100 | -> | Plus |
arm_2L | 8489266..8490185 | 195..1114 | 100 | -> | Plus |
arm_2L | 8490241..8490348 | 1115..1222 | 100 | | Plus |
BS14332.pep Sequence
Translation from 16 to 1221
> BS14332.pep
MEQINEDVWIDILKYLPMRDQLSLVEVNENISAYVKYHWSHLKTVTLTRE
DLDFLDRNNKLMHECLGGWSATVERLNLQSASSDLLRKWTEYDFPHLRSL
DCHMDYNLEEADEETLLLTELFPLLTRLSLNSSTTGRYLWHWKQLRELNL
TWCEYLDPDHFEEIFGNLQLTKLTMLYYGYNVNLGEKVVDITRCTTLEEL
HIDDHHLLGDFLPRLMNLPHFRRLAFYTRDYYEYLLGSVARHKPLKVQSL
LFNDSFWSSERVAGSILHMTNLRRLVLQEDDIDAQQLHTICHKLPNLEEL
HLLAMREVPSPSHLWNSIGHCHLLRILNLSSTKLVDLRSSCLTKVLLSRR
IPLTLHLHNTGLDPSKVLRDFDSASLKISFEPIHLNIWSPRFVEIEFSPD
S*
BS14332.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:26:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13088-PA | 401 | CG13088-PA | 1..401 | 1..401 | 2137 | 100 | Plus |
CG31633-PA | 408 | CG31633-PA | 4..384 | 1..380 | 365 | 29 | Plus |
CG14937-PA | 445 | CG14937-PA | 16..370 | 3..332 | 244 | 23.8 | Plus |