Clone Sequence Records
BS14337.3prime Sequence
450 bp (448 high quality bases) assembled on 2006-10-13
> BS14337.3prime
ATGGTCTAGAAAGCTTCTAGAATAACGTCTCCTCGAGGACCTTAGCTAGG
GCACGAAGATTGGGTCCGTCGATTTTCTTGAGACCCAGGCCCACCACGAA
CTCCGTCGGGCACTTGTGGAGTCCGGTTCTGTTGACCAGAAACTGTATGG
CGCTGCGAGTCTCGTCGGTGTCCAAGCCCAAGCAGCAGTTCATCGTGATT
GGCACCGATACGTGGAACTCCGGATTGTCCACGGGTCCGTGCAAATAGGG
AACCACTCTTTCGTCCTTTTTGACATCGAAGTGCACGTTGTAGATGCCGG
GAATCTTGCCGAGCTGCGTTATGACTAAGAACCACTTCTTGGCAAAGCAG
TGGAACACTATCTCCGTGGGAACGCCGTTCACGTCCGCTGAGAACTGCCT
GTCGAATCCGATTTGTCGAGGTTTGTTTGCTGTGTGATTCATGTCGACTG
BS14337.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:17:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-PA | 426 | CG11885-RA | 1..426 | 442..17 | 2080 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:41:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-RA | 556 | CG11885-RA | 85..510 | 442..17 | 2100 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:41:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 420941..421366 | 17..442 | 2100 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-08 11:41:55 has no hits.
BS14337.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:26 Download gff for
BS14337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-PA | 1..426 | 17..442 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:36:13 Download gff for
BS14337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 85..519 | 9..442 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:41:34 Download gff for
BS14337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 85..519 | 9..442 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:41:34 Download gff for
BS14337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 420932..421366 | 9..442 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:36:13 Download gff for
BS14337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 420932..421366 | 9..442 | 98 | | Plus |
BS14337.5prime Sequence
463 bp (384 high quality bases) assembled on 2006-10-13
> BS14337.5prime
GAAGTTATCAGTCGACATGAATCACACAGCAAACAAACCTCGACAAATCG
GATTCGACAGGCAGTTCTCAGCGGACGTGAACGGCGTTCCCACGGAGATA
GTGTTCCACTGCTTTGCCAAGAAGTGGTTCTTAGTCATAACGCAGCTCGG
CAAGATTCCCGGCATCTACAACGTGCACTTCGATGTCAAAAAGGACGAAA
GAGTGGTTCCCTATTTGCACGGACCCGTGGACAATCCGGAGTTCCACGTA
TCGGTGCCAATCACGATGAACTGCTGCTTGGGCTTGGACACCGACGAGAC
TCGCAGCGCCATACAGTTTCTGGTCAACAGAACCGGACTCCACAAGTGCC
CCGACGGAGTTCGTGGTGGGCCTGGGTCTCAAGAAAATCGACGGACCCCA
TCTTCGTGCCCTAAGCTAAGGTCCTCGAGGAGACGTTATTCTAGAAGCCT
TCTTGACCATTTC
BS14337.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-PA | 426 | CG11885-RA | 1..335 | 17..351 | 1650 | 99.7 | Plus |
CG11885-PA | 426 | CG11885-RA | 333..396 | 350..413 | 270 | 96.8 | Plus |
CG11885-PA | 426 | CG11885-RA | 396..426 | 414..444 | 155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:42:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-RA | 556 | CG11885-RA | 85..510 | 17..444 | 2045 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:42:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 420941..421366 | 444..17 | 1995 | 98.8 | Minus |
Blast to na_te.dros performed on 2015-02-08 11:42:09 has no hits.
BS14337.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:26 Download gff for
BS14337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-PA | 1..426 | 17..444 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:36:14 Download gff for
BS14337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 85..519 | 17..452 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:41:36 Download gff for
BS14337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 85..519 | 17..452 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:41:36 Download gff for
BS14337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 420932..421366 | 17..452 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:36:14 Download gff for
BS14337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 420932..421366 | 17..452 | 97 | | Minus |
BS14337.complete Sequence
458 bp assembled on 2006-11-01
GenBank Submission: FJ637636
> BS14337.complete
GAAGTTATCAGTCGACATGAATCACACAGCAAACAAACCTCGACAAATCG
GATTCGACAGGCAGTTCTCAGCGGACGTGAACGGCGTTCCCACGGAGATA
GTGTTCCACTGCTTTGCCAAGAAGTGGTTCTTAGTCATAACGCAGCTCGG
CAAGATTCCCGGCATCTACAACGTGCACTTCGATGTCAAAAAGGACGAAA
GAGTGGTTCCCTATTTGCACGGACCCGTGGACAATCCGGAGTTCCACGTA
TCGGTGCCAATCACGATGAACTGCTGCTTGGGCTTGGACACCGACGAGAC
TCGCAGCGCCATACAGTTTCTGGTCAACAGAACCGGACTCCACAAGTGCC
CGACGGAGTTCGTGGTGGGCCTGGGTCTCAAGAAAATCGACGGACCCAAT
CTTCGTGCCCTAGCTAAGGTCCTCGAGGAGACGTTATTCTAGAAGCTTTC
TAGACCAT
BS14337.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:55:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-RA | 426 | CG11885-PA | 1..426 | 17..442 | 2100 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:55:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-RA | 556 | CG11885-RA | 85..510 | 17..442 | 2100 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:55:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 420941..421366 | 442..17 | 2100 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:55:49 has no hits.
BS14337.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:11 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 1..426 | 17..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:30 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 42..476 | 17..450 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:17 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 85..510 | 17..442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:11 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 42..476 | 17..450 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:17 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11885-RA | 85..510 | 17..442 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:17 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 420941..421366 | 17..442 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:17 Download gff for
BS14337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 420941..421366 | 17..442 | 99 | | Minus |
BS14337.pep Sequence
Translation from 16 to 441
> BS14337.pep
MNHTANKPRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGI
YNVHFDVKKDERVVPYLHGPVDNPEFHVSVPITMNCCLGLDTDETRSAIQ
FLVNRTGLHKCPTEFVVGLGLKKIDGPNLRALAKVLEETLF*
BS14337.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11885-PA | 141 | CG11885-PA | 1..141 | 1..141 | 758 | 100 | Plus |