Clone BS14362 Report

Search the DGRC for BS14362

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:143
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptMul1-RA
Protein status:BS14362.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14362.3prime Sequence

586 bp (544 high quality bases) assembled on 2006-10-13

> BS14362.3prime
ATGGTCTAGAAAGCTTCTAGGCGATGAAGGCGGCTGCCTTGGAGACGATG
CTACCACGACACACGGGGCAGGTGACGGAGATTTTCTGGGCACAGTCCTC
GCAGAGACACACATGACCACATGGCAGTAGGATAATCTCCTTGGGATTGG
TGGAGCACACCACGCAGAGTTGATCCTGGGACAGAGTGTGAGGACGACTC
CTCGCCCTCCGCTCCCGACGCTCCGTATCCAGGCGTTCGCGAATTTTGGC
CTCCTCCCGCTCCTGCTTTCGTTTTCGGTAGAGTTTCTTGGCAATGAAGG
CAACCAGGATGGCAGAGATGGTGCTGCACACAACCAGCTTGAGTATCGTC
GTTGTCTTGGCATCTTCGAACCGCTTAATAAGCGTGGACTTGGTGGCAGT
GGTCAGGAAGAGCGGTCCCTCATTGGAGGGCTGCATGCGCAGAGTATCGC
CATCCAACTCCAGTTCACCAATAGCGGTCAGGAAGCTGCCTTCTCTGAGC
ACCTCCTCCGTCGTTTGCAATCCCCTCTGACGGACGCCAGAGAAGAACCC
AACACATTGGTCGAAGAGGGACAGATTGGAGGGCTC

BS14362.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG1134-PA 1017 CG1134-RA 487..1017 547..17 2655 100 Minus
CG1134-PA 1017 CG1134-RA 448..476 586..558 145 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-RB 1656 CG1134-RB 526..1095 586..17 2790 99.5 Minus
Mul1-RA 1213 CG1134-RA 526..1095 586..17 2790 99.5 Minus
CG11594-RA 2895 CG11594-RA 2655..2776 17..138 610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4022046..4022287 586..345 1120 97.5 Minus
3L 28110227 3L 4022346..4022553 344..137 1040 100 Minus
3L 28110227 3L 4022819..4022940 138..17 610 100 Minus
Blast to na_te.dros performed on 2015-02-12 03:50:00 has no hits.

BS14362.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:43 Download gff for BS14362.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1134-PA 448..1017 17..586 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:30:27 Download gff for BS14362.3prime
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 526..1095 17..586 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:55:44 Download gff for BS14362.3prime
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 526..1095 17..586 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:55:44 Download gff for BS14362.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4022046..4022287 345..586 98 -> Minus
3L 4022346..4022553 137..344 100 -> Minus
3L 4022821..4022940 17..136 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:30:27 Download gff for BS14362.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4022046..4022287 345..586 98 -> Minus
arm_3L 4022346..4022553 137..344 100 -> Minus
arm_3L 4022821..4022940 17..136 100   Minus

BS14362.5prime Sequence

663 bp (520 high quality bases) assembled on 2006-10-13

> BS14362.5prime
GAAGTTATCAGTCGACATGGAATTTTTACACGAATCCGTTGCACTGGGCG
TGGATCTGCTAATACTTGGCCTGTGTGCGCGCGAGTACGTGCACTACAAG
CGAACTGCCAAGGTGCTGAAGGCGGCACCACAATACAACATCGATGGAGA
CCTAAAATCGGTGGTGGAGCGGCAGCGCGACAAGAAGATACCATATGCGG
TAATCCGGGGCACAGTGACGCCCATCGGGGTGCCACTGAGGAGCTCCCTG
GTGCCCAGTGTGAGTGGAGTGCTGCAGATTGTGAAGCTGCATGAGCACAG
GGTAACGCGCGGATTCGCCGGCTTCTGGACGGAACAACACAAGTTGCTGC
ACGAATCCGCCAACGAGATGCCCTTCGAGTTGCGTAACCAGAGCCATGGT
GTGGAGATTGTGGACGCCTTGAGTGCCGCCGTCTTGGACGTGGACGTGGT
CTACGACAACTACGAGCCCTCCAATCTGTCCCTCTTCGACCATGTGTTTG
GTTTCTTCTCTGGCGTCCGTCAGAGGGGATTGCAAACGACGGAGGAGGTG
CTCAGAGAAAGCAGCTTCCTGACCGCTATTGGTGAACTGGAGTTGGATGG
CGATACTCTGCCCATGCAGCCCTCCAATGAAGGGACGCTCTTCCTGACCA
CTGCCACCAAGTC

BS14362.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG1134-PA 1017 CG1134-RA 1..647 17..663 3110 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-RB 1656 CG1134-RB 79..725 17..663 3160 99.4 Plus
Mul1-RA 1213 CG1134-RA 79..725 17..663 3160 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4021702..4022245 120..663 2645 99.1 Plus
3L 28110227 3L 4021535..4021640 17..122 530 100 Plus
Blast to na_te.dros performed on 2015-02-03 06:33:22 has no hits.

BS14362.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:44 Download gff for BS14362.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1134-PA 1..647 17..663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:28:52 Download gff for BS14362.5prime
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 73..725 9..663 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:37:25 Download gff for BS14362.5prime
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 73..725 9..663 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:37:25 Download gff for BS14362.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4021530..4021639 13..121 97 -> Plus
3L 4021704..4022245 122..663 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:28:52 Download gff for BS14362.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4021530..4021639 13..121 97 -> Plus
arm_3L 4021704..4022245 122..663 99   Plus

BS14362.complete Sequence

1049 bp assembled on 2006-11-01

GenBank Submission: FJ637640

> BS14362.complete
GAAGTTATCAGTCGACATGGAATTTTTACACGAATCCGTTGCACTGGGCG
TGGATCTGCTAATACTTGGCCTGTGTGCGCGCGAGTACGTGCACTACAAG
CGAACTGCCAAGGTGCTGAAGGCGGCACCACAATACAACATCGATGGAGA
CCTAAAATCGGTGGTGGAGCGGCAGCGCGACAAGAAGATACCATATGCGG
TAATCCGGGGCACAGTGACGCCCATCGGGGTGCCACTGAGGAGCTCCCTG
GTGCCCAGTGTGAGTGGAGTGCTGCAGATTGTGAAGCTGCATGAGCACAG
GGTAACGCGCGGATTCGCCGGCTTCTGGACGGAACAACACAAGTTGCTGC
ACGAATCCGCCAACGAGATGCCCTTCGAGTTGCGTAACCAGAGCCATGGT
GTGGAGATTGTGGACGCCTTGAGTGCCGCCGTCTTGGACGTGGACGTGGT
CTACGACAACTACGAGCCCTCCAATCTGTCCCTCTTCGACCATGTGTTTG
GTTTCTTCTCTGGCGTCCGTCAGAGGGGATTGCAAACGACGGAGGAGGTG
CTCAGAGAAGGCAGCTTCCTGACCGCTATTGGTGAACTGGAGTTGGATGG
CGATACTCTGCGCATGCAGCCCTCCAATGAGGGACCGCTCTTCCTGACCA
CTGCCACCAAGTCCACGCTTATTAAGCGGTTCGAAGATGCCAAGACAACG
ACGATACTCAAGCTGGTTGTGTGCAGCACCATCTCTGCCATCCTGGTTGC
CTTCATTGCCAAGAAACTCTACCGAAAACGAAAGCAGGAGCGGGAGGAGG
CCAAAATTCGCGAACGCCTGGATACGGAGCGTCGGGAGCGGAGGGCGAGG
AGTCGTCCTCACACTCTGTCCCAGGATCAACTCTGCGTGGTGTGCTCCAC
CAATCCCAAGGAGATTATCCTACTGCCATGTGGTCATGTGTGTCTCTGCG
AGGACTGTGCCCAGAAAATCTCCGTCACCTGCCCCGTGTGTCGTGGTAGC
ATCGTCTCCAAGGCAGCCGCCTTCATCGCCTAGAAGCTTTCTAGACCAT

BS14362.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-RB 1017 CG1134-PB 1..1017 17..1033 5085 100 Plus
Mul1-RA 1017 CG1134-PA 1..1017 17..1033 5085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-RB 1656 CG1134-RB 79..1095 17..1033 5085 100 Plus
Mul1-RA 1213 CG1134-RA 79..1095 17..1033 5085 100 Plus
CG11594-RA 2895 CG11594-RA 2655..2776 1033..912 610 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4021702..4022287 120..705 2930 100 Plus
3L 28110227 3L 4022346..4022553 706..913 1040 100 Plus
3L 28110227 3L 4022819..4022940 912..1033 610 100 Plus
3L 28110227 3L 4021535..4021640 17..122 530 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:17:01 has no hits.

BS14362.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:18 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 1..1017 17..1033 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:10:30 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 91..1113 9..1033 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:56:50 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 79..1095 17..1033 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:18 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 91..1113 9..1033 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:29 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 79..1095 17..1033 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:15:29 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4021535..4021639 17..121 100 -> Plus
3L 4021704..4022287 122..705 100 -> Plus
3L 4022346..4022553 706..913 100 -> Plus
3L 4022821..4022940 914..1033 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:56:50 Download gff for BS14362.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4021535..4021639 17..121 100 -> Plus
arm_3L 4021704..4022287 122..705 100 -> Plus
arm_3L 4022346..4022553 706..913 100 -> Plus
arm_3L 4022821..4022940 914..1033 100   Plus

BS14362.pep Sequence

Translation from 16 to 1032

> BS14362.pep
MEFLHESVALGVDLLILGLCAREYVHYKRTAKVLKAAPQYNIDGDLKSVV
ERQRDKKIPYAVIRGTVTPIGVPLRSSLVPSVSGVLQIVKLHEHRVTRGF
AGFWTEQHKLLHESANEMPFELRNQSHGVEIVDALSAAVLDVDVVYDNYE
PSNLSLFDHVFGFFSGVRQRGLQTTEEVLREGSFLTAIGELELDGDTLRM
QPSNEGPLFLTTATKSTLIKRFEDAKTTTILKLVVCSTISAILVAFIAKK
LYRKRKQEREEAKIRERLDTERRERRARSRPHTLSQDQLCVVCSTNPKEI
ILLPCGHVCLCEDCAQKISVTCPVCRGSIVSKAAAFIA*

BS14362.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-PB 338 CG1134-PB 1..338 1..338 1723 100 Plus
Mul1-PA 338 CG1134-PA 1..338 1..338 1723 100 Plus