Clone BS14369 Report

Search the DGRC for BS14369

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:143
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG2291-RA
Protein status:BS14369.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14369.3prime Sequence

366 bp (366 high quality bases) assembled on 2006-10-13

> BS14369.3prime
ATGGTCTAGAAAGCTTCTAGATATCGTAGGTGCCATAAACCATTCGTCGC
CGGAAGTCTGCCCAGCGGTATCGCGGATTGCGGAAGCGGGTCGTCTGCAC
CTCTCCGTGATCCTGCGCCTGCTCCTGGTACTTATGAAAGTTCTTAACAA
AGCATCGCGGAGCATGATGGTATTCTGGATTGGGTTCATCCCGCTGGTGG
CACAGGACTTCGTCGATCTTCTTCAGATCCCCAACGCACTGGTTTCGGCG
CGTCGAGTAGGCGAATCTTCCAGTCATTCGGGACGTGGCTTGCTGGACCG
CCAGTCGGACATAGGCGGATAGGGCCGATTGGTTTCCATTGGCTGGCAGC
ATGTCGACTGATAACT

BS14369.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-PA 336 CG2291-RA 1..336 352..17 1630 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-RA 817 CG2291-RA 264..608 352..8 1665 98.8 Minus
CG2291-RB 793 CG2291-RB 208..544 344..8 1625 98.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260856..8261200 8..352 1665 98.8 Plus
Blast to na_te.dros performed on 2015-01-30 17:41:46 has no hits.

BS14369.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:52 Download gff for BS14369.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2291-PA 1..336 17..352 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:49:11 Download gff for BS14369.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 259..608 8..357 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:04:14 Download gff for BS14369.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 259..608 8..357 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:04:14 Download gff for BS14369.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8260856..8261205 8..357 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:49:11 Download gff for BS14369.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4148361..4148710 8..357 98   Plus

BS14369.5prime Sequence

366 bp (366 high quality bases) assembled on 2006-10-13

> BS14369.5prime
GAAGTTATCAGTCGACATGCTGCCAGCCAATGGAAACCAATCGGCCCTAT
CCGCCTATGTCCGACTGGCGGTCCAGCAAGCCACGTCCCGAATGACTGGA
AGATTCGCCTACTCGACGCGCCGAAACCAGTGCGTTGGGGATCTGAAGAA
GATCGACGAAGTCCTGTGCCACCAGCGGGATGAACCCAATCCAGAATACC
ATCATGCTCCGCGATGCTTTGTTAAGAACTTTCATAAGTACCAGGAGCAG
GCGCAGGATCACGGAGAGGTGCAGACGACCCGCTTCCGCAATCCGCGATA
CCGCTGGGCAGACTTCCGGCGACGAATGGTTTATGGCACCTACGATATCT
AGAAGCTTTCTAGACC

BS14369.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-PA 336 CG2291-RA 1..336 17..352 1630 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-RA 817 CG2291-RA 264..608 17..361 1665 98.8 Plus
CG2291-RB 793 CG2291-RB 208..544 25..361 1625 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260856..8261200 361..17 1665 98.8 Minus
Blast to na_te.dros performed on 2015-02-08 11:45:59 has no hits.

BS14369.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:52 Download gff for BS14369.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2291-PA 1..336 17..352 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:36:44 Download gff for BS14369.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 259..608 12..361 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:42:04 Download gff for BS14369.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 259..608 12..361 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:42:04 Download gff for BS14369.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8260856..8261205 12..361 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:36:44 Download gff for BS14369.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4148361..4148710 12..361 98   Minus

BS14369.complete Sequence

368 bp assembled on 2006-11-01

> BS14369.complete
GAAGTTATCAGTCGACATGCTGCCAGCCAATGGAAACCAATCGGCCCTAT
CCGCCTATGTCCGACTGGCGGTCCAGCAAGCCACGTCCCGAATGACTGGA
AGATTCGCCTACTCGACGCGCCGAAACCAGTGCGTTGGGGATCTGAAGAA
GATCGACGAAGTCCTGTGCCACCAGCGGGATGAACCCAATCCAGAATACC
ATCATGCTCCGCGATGCTTTGTTAAGAACTTTCATAAGTACCAGGAGCAG
GCGCAGGATCACGGAGAGGTGCAGACGACCCGCTTCCGCAATCCGCGATA
CCGCTGGGCAGACTTCCGGCGACGAATGGTTTATGGCACCTACGATATCT
AGAAGCTTTCTAGACCAT

BS14369.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-RA 336 CG2291-PA 1..336 17..352 1650 99.4 Plus
CG2291-RB 261 CG2291-PB 1..261 92..352 1290 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-RA 817 CG2291-RA 264..608 17..361 1665 98.8 Plus
CG2291-RB 793 CG2291-RB 208..544 25..361 1625 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8260856..8261200 361..17 1665 98.8 Minus
Blast to na_te.dros performed on 2014-11-27 16:10:50 has no hits.

BS14369.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:21 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 1..336 17..352 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:10:33 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 259..608 12..361 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:27 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 264..599 17..352 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:21 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 259..608 12..361 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:37 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
CG2291-RA 264..599 17..352 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:37 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8260865..8261200 17..352 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:27 Download gff for BS14369.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4148370..4148705 17..352 99   Minus

BS14369.pep Sequence

Translation from 16 to 351

> BS14369.pep
MLPANGNQSALSAYVRLAVQQATSRMTGRFAYSTRRNQCVGDLKKIDEVL
CHQRDEPNPEYHHAPRCFVKNFHKYQEQAQDHGEVQTTRFRNPRYRWADF
RRRMVYGTYDI*

BS14369.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG2291-PA 111 CG2291-PA 1..111 1..111 607 100 Plus
CG2291-PB 86 CG2291-PB 1..86 26..111 488 100 Plus