Clone Sequence Records
BS14369.3prime Sequence
366 bp (366 high quality bases) assembled on 2006-10-13
> BS14369.3prime
ATGGTCTAGAAAGCTTCTAGATATCGTAGGTGCCATAAACCATTCGTCGC
CGGAAGTCTGCCCAGCGGTATCGCGGATTGCGGAAGCGGGTCGTCTGCAC
CTCTCCGTGATCCTGCGCCTGCTCCTGGTACTTATGAAAGTTCTTAACAA
AGCATCGCGGAGCATGATGGTATTCTGGATTGGGTTCATCCCGCTGGTGG
CACAGGACTTCGTCGATCTTCTTCAGATCCCCAACGCACTGGTTTCGGCG
CGTCGAGTAGGCGAATCTTCCAGTCATTCGGGACGTGGCTTGCTGGACCG
CCAGTCGGACATAGGCGGATAGGGCCGATTGGTTTCCATTGGCTGGCAGC
ATGTCGACTGATAACT
BS14369.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-PA | 336 | CG2291-RA | 1..336 | 352..17 | 1630 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:41:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-RA | 817 | CG2291-RA | 264..608 | 352..8 | 1665 | 98.8 | Minus |
CG2291-RB | 793 | CG2291-RB | 208..544 | 344..8 | 1625 | 98.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260856..8261200 | 8..352 | 1665 | 98.8 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:41:46 has no hits.
BS14369.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:52 Download gff for
BS14369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-PA | 1..336 | 17..352 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:49:11 Download gff for
BS14369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 259..608 | 8..357 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:04:14 Download gff for
BS14369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 259..608 | 8..357 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:04:14 Download gff for
BS14369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260856..8261205 | 8..357 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:49:11 Download gff for
BS14369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4148361..4148710 | 8..357 | 98 | | Plus |
BS14369.5prime Sequence
366 bp (366 high quality bases) assembled on 2006-10-13
> BS14369.5prime
GAAGTTATCAGTCGACATGCTGCCAGCCAATGGAAACCAATCGGCCCTAT
CCGCCTATGTCCGACTGGCGGTCCAGCAAGCCACGTCCCGAATGACTGGA
AGATTCGCCTACTCGACGCGCCGAAACCAGTGCGTTGGGGATCTGAAGAA
GATCGACGAAGTCCTGTGCCACCAGCGGGATGAACCCAATCCAGAATACC
ATCATGCTCCGCGATGCTTTGTTAAGAACTTTCATAAGTACCAGGAGCAG
GCGCAGGATCACGGAGAGGTGCAGACGACCCGCTTCCGCAATCCGCGATA
CCGCTGGGCAGACTTCCGGCGACGAATGGTTTATGGCACCTACGATATCT
AGAAGCTTTCTAGACC
BS14369.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:46:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-PA | 336 | CG2291-RA | 1..336 | 17..352 | 1630 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:46:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-RA | 817 | CG2291-RA | 264..608 | 17..361 | 1665 | 98.8 | Plus |
CG2291-RB | 793 | CG2291-RB | 208..544 | 25..361 | 1625 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:45:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260856..8261200 | 361..17 | 1665 | 98.8 | Minus |
Blast to na_te.dros performed on 2015-02-08 11:45:59 has no hits.
BS14369.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:50:52 Download gff for
BS14369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-PA | 1..336 | 17..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:36:44 Download gff for
BS14369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 259..608 | 12..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:42:04 Download gff for
BS14369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 259..608 | 12..361 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:42:04 Download gff for
BS14369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260856..8261205 | 12..361 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:36:44 Download gff for
BS14369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4148361..4148710 | 12..361 | 98 | | Minus |
BS14369.complete Sequence
368 bp assembled on 2006-11-01
> BS14369.complete
GAAGTTATCAGTCGACATGCTGCCAGCCAATGGAAACCAATCGGCCCTAT
CCGCCTATGTCCGACTGGCGGTCCAGCAAGCCACGTCCCGAATGACTGGA
AGATTCGCCTACTCGACGCGCCGAAACCAGTGCGTTGGGGATCTGAAGAA
GATCGACGAAGTCCTGTGCCACCAGCGGGATGAACCCAATCCAGAATACC
ATCATGCTCCGCGATGCTTTGTTAAGAACTTTCATAAGTACCAGGAGCAG
GCGCAGGATCACGGAGAGGTGCAGACGACCCGCTTCCGCAATCCGCGATA
CCGCTGGGCAGACTTCCGGCGACGAATGGTTTATGGCACCTACGATATCT
AGAAGCTTTCTAGACCAT
BS14369.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-RA | 336 | CG2291-PA | 1..336 | 17..352 | 1650 | 99.4 | Plus |
CG2291-RB | 261 | CG2291-PB | 1..261 | 92..352 | 1290 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-RA | 817 | CG2291-RA | 264..608 | 17..361 | 1665 | 98.8 | Plus |
CG2291-RB | 793 | CG2291-RB | 208..544 | 25..361 | 1625 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8260856..8261200 | 361..17 | 1665 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:10:50 has no hits.
BS14369.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:21 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 1..336 | 17..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:10:33 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 259..608 | 12..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:27 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 264..599 | 17..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:21 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 259..608 | 12..361 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:37 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2291-RA | 264..599 | 17..352 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:37 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8260865..8261200 | 17..352 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:27 Download gff for
BS14369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4148370..4148705 | 17..352 | 99 | | Minus |
BS14369.pep Sequence
Translation from 16 to 351
> BS14369.pep
MLPANGNQSALSAYVRLAVQQATSRMTGRFAYSTRRNQCVGDLKKIDEVL
CHQRDEPNPEYHHAPRCFVKNFHKYQEQAQDHGEVQTTRFRNPRYRWADF
RRRMVYGTYDI*
BS14369.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2291-PA | 111 | CG2291-PA | 1..111 | 1..111 | 607 | 100 | Plus |
CG2291-PB | 86 | CG2291-PB | 1..86 | 26..111 | 488 | 100 | Plus |