Clone Sequence Records
BS14378.complete Sequence
665 bp assembled on 2010-02-09
GenBank Submission: KX803563
> BS14378.complete
GAAGTTATCAGTCGACATGACCTGCACATTGGTACTCCTGATTGCCAGCG
TTCTGCACTTCCGAATGCGTGGCAGTTGTCTGCTGGACATAGAGCGTTTC
CCGGTAATTCCCGGCACCATCTACGCCGGCCACATTGCCTACTGCGCCAT
CCTATACTTCCTGCACGACCTGGAGATCCTGCCCACGCGCTATCGTAGCC
GGATGGGCTGGCTGACCACCTTCCTGATCGAACTGGTGTTGGGCGTGGCC
TTCATGGAGGTCCTGGCCCTGTGGCTCTGGTGCAGCGTGGAGCACATCCT
CCACCTGTCCACCCAGTTCGTGCTGCGCCGCTATCTGGGCGTCTCCACCG
AAGTCTACCAGCGCTGGGAGTGGGCCATCATGGGTGGTCTGATGACCACG
CTGGCAGCCATGCTCTGGATAAACGCCTTCGAGGCCACGGAGACAACTAA
AGCAGAGAGGGTGTCGAAGGATGTCAAGGACATCCGGATGAAGGCGGTCC
TGTGCCAGCGGGAGGAGAAACAGAAGCAGGATCACGATCTGGAGAAGATT
GAGCAGCCTGCTCCAGAGCCAGAGGAGTCACAAAATCCTGATGAAGTGCA
GCTGCCGGAGAATCATCTAAAGCTGCTGGCCACCACCACTGATTGCTAAA
AGCTTTCTAGACCAT
BS14378.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 633 | CG9570-PA | 1..633 | 17..649 | 3165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 163..795 | 17..649 | 3165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051456..20052088 | 17..649 | 3165 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:16:54 has no hits.
BS14378.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:18 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 1..633 | 17..649 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:00 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 163..793 | 17..647 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:53 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 163..793 | 17..647 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:50:24 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 163..793 | 17..647 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:48 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 163..793 | 17..647 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:48 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051456..20052086 | 17..647 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:53 Download gff for
BS14378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945489..19946119 | 17..647 | 100 | | Plus |
BS14378.3prime Sequence
540 bp (447 high quality bases) assembled on 2006-10-13
> BS14378.3prime
ATGGTCTAGAAAGCTTTTAGCAATCAGTGGTGGTGGCCAGCAGCTTTAGA
TGATTCTCCGGCAGCTGCACTTCATCAGGATTTTGTGACTCCTCTGGCTC
TGGAGCAGGCTGCTCAATCTTCTCCAGATCGTGATCCTGCTTCTGTTTCT
CCTCCCGCTGGCACAGGACCGCCTTCATCCGGATGTCCTTGACATCCTTC
GACACCCTCTCTGCTTTAGTTGTCTCCGTGGCCTCGAAGGCGTTTATCCA
GAGCATGGCTGCCAGCGTGGTCATCAGACCACCCATGATGGCCCACTCCC
AGCGCTGGTAGACTTCGGTGGAGACGCCCAGATAGCGGCGCAGCACGAAC
TGGGTGGACAGGTGGAGGATGTGCTCCACGCTGCACCAGAGCCACAGGGC
CAGGACCTCCATGAAGGCCACGCCCCACACCAGTTCGATCAGGAAGGTGG
TCAGCCAGCCCATCCGGCTACGATAGCGCGTGGGCAGGATCTCCAGGTCG
TGCAGGAAGTATAGGATGGCGCAGTAGGCAATGTGGCCGG
BS14378.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:18:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-PA | 633 | CG9570-RA | 110..633 | 540..17 | 2595 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:24:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 272..795 | 540..17 | 2605 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051565..20052088 | 540..17 | 2605 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:24:08 has no hits.
BS14378.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:08 Download gff for
BS14378.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-PA | 110..633 | 17..540 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:11:09 Download gff for
BS14378.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 272..801 | 11..540 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:55:55 Download gff for
BS14378.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 272..801 | 11..540 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:55:55 Download gff for
BS14378.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051565..20052094 | 11..540 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:11:09 Download gff for
BS14378.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945598..19946127 | 11..540 | 99 | | Minus |
BS14378.5prime Sequence
458 bp (417 high quality bases) assembled on 2006-10-13
> BS14378.5prime
GAAGTTATCAGTCGACATGACCTGCACATTGGTACTCCTGATTGCCAGCG
TTCTGCACTTCCGAATGCGTGGCAGTTGTCTGCTGGACATAGAGCGTTTC
CCGGTAATTCCCGGCACCATCTACGCCGGCCACATTGCCTACTGCGCCAT
CCTATACTTCCTGCACGACCTGGAGATCCTGCCCACGCGCTATCGTAGCC
GGATGGGCTGGCTGACCACCTTCCTGATCGAACTGGTGTTGGGCGTGGCC
TTCATGGAGGTCCTGGCCCTGTGGCTCTGGTGCAGCGTGGAGCACATCCT
CCACCTGTCCACCCAGTTCGTGCTGCGCCGCTATCTGGGCGTCTCCACCG
AAGTCTACCAGCGCTGGGAGTGGGCCATCATGGGTGGTCTGATGACCACG
CTGGCAGCCATGCTCTGGATAAACGCCTTCGAGGCCACGGAGACAACTAA
AGCAGAGA
BS14378.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:18:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-PA | 633 | CG9570-RA | 1..442 | 17..458 | 2210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:10:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 163..604 | 17..458 | 2210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051456..20051897 | 17..458 | 2210 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:10:28 has no hits.
BS14378.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:09 Download gff for
BS14378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-PA | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:56:50 Download gff for
BS14378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..603 | 7..457 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:30:46 Download gff for
BS14378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 154..603 | 7..457 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:30:46 Download gff for
BS14378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051447..20051896 | 7..457 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:56:50 Download gff for
BS14378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945480..19945929 | 7..457 | 99 | | Plus |
BS14378.pep Sequence
Translation from 16 to 648
> BS14378.pep
MTCTLVLLIASVLHFRMRGSCLLDIERFPVIPGTIYAGHIAYCAILYFLH
DLEILPTRYRSRMGWLTTFLIELVLGVAFMEVLALWLWCSVEHILHLSTQ
FVLRRYLGVSTEVYQRWEWAIMGGLMTTLAAMLWINAFEATETTKAERVS
KDVKDIRMKAVLCQREEKQKQDHDLEKIEQPAPEPEESQNPDEVQLPENH
LKLLATTTDC*
BS14378.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-PA | 210 | CG9570-PA | 1..210 | 1..210 | 1105 | 100 | Plus |
