Clone Sequence Records
BS14385.3prime Sequence
473 bp (439 high quality bases) assembled on 2006-10-13
> BS14385.3prime
ATGGTCTAGAAAGCTTCTACCACTTAATGTAGGTGAACTTGAAGGTTTTC
GGTTCCGTCGCCTCGCAGACGTACAGCATCTGGATCTTGCAGTTGGCATC
GTTGATCATCTCCCGGGTGGCGAACATGTGGACGCAGTTCTCGTTGCCGC
CGTAGTTATCCGGCATTTGCTTGGGCCCGTTCCAAGGGGCGTAGGTCATC
GGGCGGCCGTTGGACATCCAATAGAAGGCGCCCTCGGTGCCCAGGTCATT
GCCCGATATCCAAAAGTAATCATTGTTCTTGAACCCCTTGGCCTTCATGT
ATTTGATCAGCGCCTCCATTTCCGGCTTATCCTCGATGGAGGCCAAGTGG
GCGTTCATCATGCGACAGGCGCCGGCCGCCTGAAACCAATTCACCTTATT
CATGGGCTCGATGTAGTAATAGTTGTCCCCGATCCGCACGAACGGTGTGG
TATCAATCTCCGATGGAATGGCC
BS14385.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-PA | 567 | CG12111-RA | 114..567 | 470..17 | 2270 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:47:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-RB | 675 | CG12111-RB | 140..593 | 470..17 | 2270 | 100 | Minus |
| CG12111-RA | 631 | CG12111-RA | 140..593 | 470..17 | 2270 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8570290..8570743 | 17..470 | 2270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 11:47:20 has no hits.
BS14385.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:15 Download gff for
BS14385.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-PA | 112..567 | 17..473 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:36:57 Download gff for
BS14385.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 138..598 | 9..473 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:42:11 Download gff for
BS14385.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 138..598 | 9..473 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:42:11 Download gff for
BS14385.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8570285..8570745 | 9..473 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:36:57 Download gff for
BS14385.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8464318..8464778 | 9..473 | 98 | | Plus |
BS14385.5prime Sequence
454 bp (407 high quality bases) assembled on 2006-10-13
> BS14385.5prime
GAAGTTATCAGTCGACATGTACCGCACCGAGACTCTGCTGCTAATCCTGA
CGAGCGTCGGGATACCGTCACTGGCCTATCTGCCCGATGTGAACATATTC
ACCAACTACCGCACCGAGGTCTATAATGGCATTCCATCGGAGATTGATAC
CACACCGTTCGTGCGGATCGGGGACAACTATTACTACATCGAGCCCATGA
ATAAGGTGAATTGGTTTCAGGCGGCCGGCGCCTGTCGCATGATGAACGCC
CACTTGGCCTCCATCGAGGATAAGCCGGAAATGGAGGCGCTGATCAAATA
CATGAAGGCCAAGGGGTTCAAGAACAATGATTACTTTTGGATATCGGGCA
ATGACCTGGGCACCGAGGGCGCCTTCTATTGGATGTCCAACGGCCGCCCG
ATGACCTACGCCCCTTGGAACGGGCCCAAGCAAATGCCGGATAACTACGG
CGGC
BS14385.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-PA | 567 | CG12111-RA | 1..438 | 17..454 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-RB | 675 | CG12111-RB | 27..464 | 17..454 | 2190 | 100 | Plus |
| CG12111-RA | 631 | CG12111-RA | 27..464 | 17..454 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8570419..8570745 | 454..128 | 1635 | 100 | Minus |
| X | 23542271 | X | 8570810..8570922 | 129..17 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:07:15 has no hits.
BS14385.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:15 Download gff for
BS14385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-PA | 1..438 | 17..454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:00:23 Download gff for
BS14385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 22..464 | 9..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:52:59 Download gff for
BS14385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 22..464 | 9..454 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 10:52:59 Download gff for
BS14385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8570419..8570744 | 129..454 | 100 | <- | Minus |
| X | 8570811..8570927 | 9..128 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:00:23 Download gff for
BS14385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8464452..8464777 | 129..454 | 100 | <- | Minus |
| arm_X | 8464844..8464960 | 9..128 | 96 | | Minus |
BS14385.complete Sequence
599 bp assembled on 2006-11-01
GenBank Submission: FJ637646
> BS14385.complete
GAAGTTATCAGTCGACATGTACCGCACCGAGACTCTGCTGCTAATCCTGA
CGAGCGTCGGGATACCGTCACTGGCCTATCTGCCCGATGTGAACATATTC
ACCAACTACCGCACCGAGGTCTATAATGGCATTCCATCGGAGATTGATAC
CACACCGTTCGTGCGGATCGGGGACAACTATTACTACATCGAGCCCATGA
ATAAGGTGAATTGGTTTCAGGCGGCCGGCGCCTGTCGCATGATGAACGCC
CACTTGGCCTCCATCGAGGATAAGCCGGAAATGGAGGCGCTGATCAAATA
CATGAAGGCCAAGGGGTTCAAGAACAATGATTACTTTTGGATATCGGGCA
ATGACCTGGGCACCGAGGGCGCCTTCTATTGGATGTCCAACGGCCGCCCG
ATGACCTACGCCCCTTGGAACGGGCCCAAGCAAATGCCGGATAACTACGG
CGGCAACGAGAACTGCGTCCACATGTTCGCCACCCGGGAGATGATCAACG
ATGCCAACTGCAAGATCCAGATGCTGTACGTCTGCGAGGCGACGGAACCG
AAAACCTTCAAGTTCACCTACATTAAGTGGTAGAAGCTTTCTAGACCAT
BS14385.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:11:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-RB | 567 | CG12111-PB | 1..567 | 17..583 | 2835 | 100 | Plus |
| CG12111-RA | 567 | CG12111-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-RB | 675 | CG12111-RB | 27..593 | 17..583 | 2835 | 100 | Plus |
| CG12111-RA | 631 | CG12111-RA | 27..593 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8570290..8570745 | 583..128 | 2280 | 100 | Minus |
| X | 23542271 | X | 8570810..8570922 | 129..17 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:11:35 has no hits.
BS14385.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:24 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:30 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 9..585 | 9..591 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:16 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 27..593 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:24 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 9..585 | 9..591 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:05:21 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12111-RA | 27..593 | 17..583 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:05:21 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8570290..8570744 | 129..583 | 100 | <- | Minus |
| X | 8570811..8570922 | 17..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:16 Download gff for
BS14385.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8464323..8464777 | 129..583 | 100 | <- | Minus |
| arm_X | 8464844..8464955 | 17..128 | 100 | | Minus |
BS14385.pep Sequence
Translation from 16 to 582
> BS14385.pep
MYRTETLLLILTSVGIPSLAYLPDVNIFTNYRTEVYNGIPSEIDTTPFVR
IGDNYYYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKG
FKNNDYFWISGNDLGTEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENC
VHMFATREMINDANCKIQMLYVCEATEPKTFKFTYIKW*
BS14385.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12111-PB | 188 | CG12111-PB | 1..188 | 1..188 | 1039 | 100 | Plus |
| CG12111-PA | 188 | CG12111-PA | 1..188 | 1..188 | 1039 | 100 | Plus |
| lectin-37Da-PB | 186 | CG33532-PB | 21..179 | 28..180 | 272 | 36 | Plus |
| lectin-37Da-PA | 186 | CG33532-PA | 21..179 | 28..180 | 272 | 36 | Plus |
| CG43055-PA | 180 | CG43055-PA | 10..177 | 20..183 | 257 | 34.3 | Plus |
