Clone Sequence Records
BS14387.3prime Sequence
411 bp (411 high quality bases) assembled on 2006-10-13
> BS14387.3prime
ATGGTCTAGAAAGCTTTCAATGACAATTACTATTGCGATGGCCTCGTTTA
TTCGTAATTGACTCGTGGGTGGCGTCGAAGAGTCTGGAGTTAATCCTCAG
TTGTTGGTCACTATTCTTTAAGGGCACCTTCTGTGTTGCCAGAATTGTGT
TCCAGTCAGCTGCGTCGGGATTCCCAGCTATCCATTTCCATGCAGATCCC
AGCCAGTTTATCGAGCAAGGTTTCCTCACGGGGGCACTGGCTATCCGGTT
AACACACTCCGTTGCGCCTTTGAGATGAGTACTCAAAAAAGATCTCAATC
CTCCTTTCCTACAAGGAAGCGGCATCTTAAGCGATTTCGTCCATAAGTTG
TCGCATTTTTCCAAGGTCAACCACGTGAGCCAGCTTGAAGACTCCATGTC
GACTGATAACT
BS14387.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 11:47:10 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 09:07:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096243..5096623 | 17..397 | 1890 | 99.7 | Plus |
2R | 25286936 | 2R | 2795671..2795821 | 276..126 | 440 | 86.1 | Minus |
2R | 25286936 | 2R | 2864053..2864238 | 99..293 | 380 | 82.1 | Plus |
2R | 25286936 | 2R | 3564433..3564543 | 259..149 | 375 | 89.2 | Minus |
3L | 28110227 | 3L | 24122711..24122880 | 276..99 | 300 | 79.2 | Minus |
2R | 25286936 | 2R | 2795578..2795645 | 392..325 | 205 | 86.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:07:18 has no hits.
BS14387.3prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:07 Download gff for
BS14387.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096243..5096631 | 17..408 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:07 Download gff for
BS14387.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096243..5096631 | 17..408 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:00:24 Download gff for
BS14387.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983748..984136 | 17..408 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:00:24 Download gff for
BS14387.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983748..984136 | 17..408 | 98 | | Plus |
BS14387.5prime Sequence
411 bp (411 high quality bases) assembled on 2006-10-13
> BS14387.5prime
GAAGTTATCAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCT
TGGAAAAATGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCT
TGTAGGAAAGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGC
AACGGAGTGTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCT
CGATAAACTGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGAC
GCAGCTGACTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAA
TAGTGACCAACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACG
AGTCAATTACGAATAAACGAGGCCATCGCAATAGTAATTGTCATTGAAAG
CTTTCTAGACC
BS14387.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 11:47:11 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-02 17:52:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096243..5096623 | 397..17 | 1890 | 99.7 | Minus |
2R | 25286936 | 2R | 2795671..2795821 | 138..288 | 440 | 86.1 | Plus |
2R | 25286936 | 2R | 2864053..2864238 | 315..121 | 380 | 82.1 | Minus |
2R | 25286936 | 2R | 3564433..3564543 | 155..265 | 375 | 89.2 | Plus |
3L | 28110227 | 3L | 24122711..24122880 | 138..315 | 300 | 79.2 | Plus |
2R | 25286936 | 2R | 2795578..2795645 | 22..89 | 205 | 86.8 | Plus |
Blast to na_te.dros performed on 2015-02-02 17:52:06 has no hits.
BS14387.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:11:52 Download gff for
BS14387.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096243..5096631 | 6..397 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:11:52 Download gff for
BS14387.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096243..5096631 | 6..397 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:40:14 Download gff for
BS14387.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983748..984136 | 6..397 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:40:14 Download gff for
BS14387.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983748..984136 | 6..397 | 98 | | Minus |
BS14387.complete Sequence
413 bp assembled on 2006-11-01
> BS14387.complete
GAAGTTATCAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCT
TGGAAAAATGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCT
TGTAGGAAAGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGC
AACGGAGTGTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCT
CGATAAACTGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGAC
GCAGCTGACTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAA
TAGTGACCAACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACG
AGTCAATTACGAATAAACGAGGCCATCGCAATAGTAATTGTCATTGAAAG
CTTTCTAGACCAT
BS14387.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 14:44:50 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 14:44:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:44:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5096243..5096623 | 397..17 | 1890 | 99.7 | Minus |
2R | 25286936 | 2R | 2795671..2795821 | 138..288 | 440 | 86.1 | Plus |
2R | 25286936 | 2R | 2864053..2864238 | 315..121 | 380 | 82.1 | Minus |
2R | 25286936 | 2R | 3564433..3564543 | 155..265 | 375 | 89.2 | Plus |
3L | 28110227 | 3L | 24122711..24122880 | 138..315 | 300 | 79.2 | Plus |
2R | 25286936 | 2R | 2795578..2795645 | 22..89 | 205 | 86.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:44:49 has no hits.
BS14387.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:46:55 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:46:55 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:48 Download gff for
BS14387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096244..5096623 | 17..396 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:48 Download gff for
BS14387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5096244..5096623 | 17..396 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:49 Download gff for
BS14387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983749..984128 | 17..396 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:49 Download gff for
BS14387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 983749..984128 | 17..396 | 99 | | Minus |
BS14387.pep Sequence
Translation from 16 to 396
> BS14387.pep
MESSSWLTWLTLEKCDNLWTKSLKMPLPCRKGGLRSFLSTHLKGATECVN
RIASAPVRKPCSINWLGSAWKWIAGNPDAADWNTILATQKVPLKNSDQQL
RINSRLFDATHESITNKRGHRNSNCH*
Sequence BS14387.pep has no blast hits.