Clone Sequence Records
BS14395.3prime Sequence
450 bp (450 high quality bases) assembled on 2006-10-13
> BS14395.3prime
ATGGTCTAGAAAGCTTTCAGTGCCAGATTTTAAGTCTGCTTGCTCCGCTC
GCCTGTCGCTTAGTGGTAATTTGGAGGAGTGACCTCAGCCTTTCCATGTG
CAGACGGGTGACGTGCTCGATGCAGTCCTTAAACGTTTGCTCCAGCTCAC
CACTGTAGAATACCTCGATGCATTTGGTCGTTTCAGTGTATGCACTATCC
AATACTTCACGGGCAGCAACCTTCTTCTGATTCTCCAGCTTGACGTAGAA
ATCGTGGATCTGCGCATCCACGTTTTTGGCTGCCCTAGATGCGGTGTGGA
TTCTATGCTGGTCGTCGTAGTTCATCTTGGAGGCCACAGCTTTGGCCATT
TGCTCCCATCGCGGATGCGCTGCTATCCATATCGTACACAAAAGTGTTAT
CAAAATAATACCGAAAATGGTTGACAGCCAACTCATGTCGACTGATAACT
BS14395.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-PA | 420 | CG14294-RA | 1..420 | 436..17 | 2100 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:34:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-RA | 602 | CG14294-RA | 76..495 | 436..17 | 2100 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:34:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18901770..18902189 | 17..436 | 2100 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:34:49 has no hits.
BS14395.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:32 Download gff for
BS14395.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-PA | 1..420 | 17..436 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:29:11 Download gff for
BS14395.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 68..495 | 17..443 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:37:37 Download gff for
BS14395.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 68..495 | 17..443 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:37:37 Download gff for
BS14395.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18901770..18902197 | 17..443 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:29:11 Download gff for
BS14395.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14727492..14727919 | 17..443 | 99 | | Plus |
BS14395.5prime Sequence
450 bp (450 high quality bases) assembled on 2006-10-13
> BS14395.5prime
GAAGTTATCAGTCGACATGAGTTGGCTGTCAACCATTTTCGGTATTATTT
TGATAACACTTTTGTGTACGATATGGATAGCAGCGCATCCGCGATGGGAG
CAAATGGCCAAAGCTGTGGCCTCCAAGATGAACTACGACGACCAGCATAG
AATCCACACCGCATCTAGGGCAGCCAAAAACGTGGATGCGCAGATCCACG
ATTTCTACGTCAAGCTGGAGAATCAGAAGAAGGTTGCTGCCCGTGAAGTA
TTGGATAGTGCATACACTGAAACGACCAAATGCATCGAGGTATTCTACAG
TGGTGAGCTGGAGCAAACGTTTAAGGACTGCATCGAGCACGTCACCCGTC
TGCACATGGAAAGGCTGAGGTCACTCCTCCAAATTACCACTAAGCGACAG
GCGAGCGGAGCAAGCAGACTTAAAATCTGGCACTGAAAGCTTTCTAGACC
BS14395.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-PA | 420 | CG14294-RA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:07:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-RA | 602 | CG14294-RA | 76..495 | 17..436 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:07:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18901770..18902189 | 436..17 | 2100 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:07:21 has no hits.
BS14395.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:33 Download gff for
BS14395.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-PA | 1..420 | 17..436 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:00:25 Download gff for
BS14395.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 68..495 | 10..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:53:14 Download gff for
BS14395.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 68..495 | 10..436 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 10:53:14 Download gff for
BS14395.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18901770..18902197 | 10..436 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:00:25 Download gff for
BS14395.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14727492..14727919 | 10..436 | 99 | | Minus |
BS14395.complete Sequence
452 bp assembled on 2006-11-01
GenBank Submission: FJ637648
> BS14395.complete
GAAGTTATCAGTCGACATGAGTTGGCTGTCAACCATTTTCGGTATTATTT
TGATAACACTTTTGTGTACGATATGGATAGCAGCGCATCCGCGATGGGAG
CAAATGGCCAAAGCTGTGGCCTCCAAGATGAACTACGACGACCAGCATAG
AATCCACACCGCATCTAGGGCAGCCAAAAACGTGGATGCGCAGATCCACG
ATTTCTACGTCAAGCTGGAGAATCAGAAGAAGGTTGCTGCCCGTGAAGTA
TTGGATAGTGCATACACTGAAACGACCAAATGCATCGAGGTATTCTACAG
TGGTGAGCTGGAGCAAACGTTTAAGGACTGCATCGAGCACGTCACCCGTC
TGCACATGGAAAGGCTGAGGTCACTCCTCCAAATTACCACTAAGCGACAG
GCGAGCGGAGCAAGCAGACTTAAAATCTGGCACTGAAAGCTTTCTAGACC
AT
BS14395.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:45:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-RA | 420 | CG14294-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:45:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-RA | 602 | CG14294-RA | 76..495 | 17..436 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:45:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18901770..18902189 | 436..17 | 2100 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:45:42 has no hits.
BS14395.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:46 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 1..420 | 17..436 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:51:23 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 68..495 | 10..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:58 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 76..494 | 17..435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:46 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 68..495 | 10..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:26:15 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14294-RA | 76..494 | 17..435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:26:15 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18901771..18902189 | 17..435 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:58 Download gff for
BS14395.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14727493..14727911 | 17..435 | 100 | | Minus |
BS14395.pep Sequence
Translation from 16 to 435
> BS14395.pep
MSWLSTIFGIILITLLCTIWIAAHPRWEQMAKAVASKMNYDDQHRIHTAS
RAAKNVDAQIHDFYVKLENQKKVAAREVLDSAYTETTKCIEVFYSGELEQ
TFKDCIEHVTRLHMERLRSLLQITTKRQASGASRLKIWH*
BS14395.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14294-PA | 139 | CG14294-PA | 1..139 | 1..139 | 724 | 100 | Plus |