Clone Sequence Records
BS14413.3prime Sequence
558 bp (558 high quality bases) assembled on 2006-10-13
> BS14413.3prime
ATGGTCTAGAAAGCTTCTACCAGACCAGCTTTACGTTGTTGCGCTCCAGC
TGGCGACTGATGCACTGGTTGAAGAGGTGGGCCACCTCGCAGGGGTTCTT
CGAGGAGATGCCGCGGCTGCAGGCCTGCGCCATGCTGGAGCTAACGGCGA
TGGCCATCTTGTTGTCCTGGGTCACCAGGCTGGTCAGCTTCTCCACCTGG
CCAACGTTCAGCTTGTTGTCGGCGTCCATCAACTTGATCTTCTTGAGCAC
GCACTCCACCAGGCACTTCTCCTTCTCACTTGGATTGGTCACCTTCCCCA
GCGGTCGCTGGTCCCTGGGCAGCTGCAGCTTCTGGATGCACTCCATCCTG
GCCGCGGTGACCAGCTCCTGCACCTGCGGCAAGTTGCGATCGATTACCGC
CCAGATGGGCTCCGTTCCGGTCTTGGGCAGCAGCTTGGCGAGATCGAAAG
CCTGGGTCTGGCCACGGACGCAGTGCGTCTGCAGCAGGACAGCGACCACT
ATCGTCATTAGCGGAATGGCTGCGACTGGAGTGGATGGCTTCATGTCGAC
TGATAACT
BS14413.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15457-PA | 528 | Obp19c-RA | 1..528 | 544..17 | 2640 | 100 | Minus |
CG15457-PB | 594 | Obp19c-RB | 1..315 | 544..230 | 1575 | 100 | Minus |
CG15457-PB | 594 | Obp19c-RB | 381..594 | 230..17 | 1070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:04:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19c-RC | 789 | CG15457-RC | 11..539 | 544..16 | 2645 | 100 | Minus |
Obp19c-RA | 978 | CG15457-RA | 200..728 | 544..16 | 2645 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:04:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20418451..20418765 | 230..544 | 1575 | 100 | Plus |
X | 23542271 | X | 20418171..20418385 | 16..230 | 1075 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:04:44 has no hits.
BS14413.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:45 Download gff for
BS14413.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15457-PA | 1..528 | 17..544 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:43:48 Download gff for
BS14413.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..736 | 8..544 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:18:53 Download gff for
BS14413.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..736 | 8..544 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:18:53 Download gff for
BS14413.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20418163..20418384 | 8..229 | 98 | <- | Plus |
X | 20418451..20418765 | 230..544 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:43:48 Download gff for
BS14413.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20289190..20289411 | 8..229 | 98 | <- | Plus |
arm_X | 20289478..20289792 | 230..544 | 100 | | Plus |
BS14413.5prime Sequence
558 bp (558 high quality bases) assembled on 2006-10-13
> BS14413.5prime
GAAGTTATCAGTCGACATGAAGCCATCCACTCCAGTCGCAGCCATTCCGC
TAATGACGATAGTGGTCGCTGTCCTGCTGCAGACGCACTGCGTCCGTGGC
CAGACCCAGGCTTTCGATCTCGCCAAGCTGCTGCCCAAGACCGGAACGGA
GCCCATCTGGGCGGTAATCGATCGCAACTTGCCGCAGGTGCAGGAGCTGG
TCACCGCGGCCAGGATGGAGTGCATCCAGAAGCTGCAGCTGCCCAGGGAC
CAGCGACCGCTGGGGAAGGTGACCAATCCAAGTGAGAAGGAGAAGTGCCT
GGTGGAGTGCGTGCTCAAGAAGATCAAGTTGATGGACGCCGACAACAAGC
TGAACGTTGGCCAGGTGGAGAAGCTGACCAGCCTGGTGACCCAGGACAAC
AAGATGGCCATCGCCGTTAGCTCCAGCATGGCGCAGGCCTGCAGCCGCGG
CATCTCCTCGAAGAACCCCTGCGAGGTGGCCCACCTCTTCAACCAGTGCA
TCAGTCGCCAGCTGGAGCGCAACAACGTAAAGCTGGTCTGGTAGAAGCTT
TCTAGACC
BS14413.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15457-PA | 528 | Obp19c-RA | 1..528 | 17..544 | 2640 | 100 | Plus |
CG15457-PB | 594 | Obp19c-RB | 1..315 | 17..331 | 1575 | 100 | Plus |
CG15457-PB | 594 | Obp19c-RB | 381..594 | 331..544 | 1070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:04:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19c-RC | 789 | CG15457-RC | 11..539 | 17..545 | 2645 | 100 | Plus |
Obp19c-RA | 978 | CG15457-RA | 200..728 | 17..545 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:04:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20418451..20418765 | 331..17 | 1575 | 100 | Minus |
X | 23542271 | X | 20418171..20418385 | 545..331 | 1075 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:04:52 has no hits.
BS14413.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:51:45 Download gff for
BS14413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15457-PA | 1..528 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:43:51 Download gff for
BS14413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..736 | 17..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:19:07 Download gff for
BS14413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..736 | 17..553 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:19:07 Download gff for
BS14413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20418163..20418384 | 332..553 | 98 | <- | Minus |
X | 20418451..20418765 | 17..331 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:43:51 Download gff for
BS14413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20289190..20289411 | 332..553 | 98 | <- | Minus |
arm_X | 20289478..20289792 | 17..331 | 100 | | Minus |
BS14413.complete Sequence
560 bp assembled on 2006-11-01
GenBank Submission: FJ637654
> BS14413.complete
GAAGTTATCAGTCGACATGAAGCCATCCACTCCAGTCGCAGCCATTCCGC
TAATGACGATAGTGGTCGCTGTCCTGCTGCAGACGCACTGCGTCCGTGGC
CAGACCCAGGCTTTCGATCTCGCCAAGCTGCTGCCCAAGACCGGAACGGA
GCCCATCTGGGCGGTAATCGATCGCAACTTGCCGCAGGTGCAGGAGCTGG
TCACCGCGGCCAGGATGGAGTGCATCCAGAAGCTGCAGCTGCCCAGGGAC
CAGCGACCGCTGGGGAAGGTGACCAATCCAAGTGAGAAGGAGAAGTGCCT
GGTGGAGTGCGTGCTCAAGAAGATCAAGTTGATGGACGCCGACAACAAGC
TGAACGTTGGCCAGGTGGAGAAGCTGACCAGCCTGGTGACCCAGGACAAC
AAGATGGCCATCGCCGTTAGCTCCAGCATGGCGCAGGCCTGCAGCCGCGG
CATCTCCTCGAAGAACCCCTGCGAGGTGGCCCACCTCTTCAACCAGTGCA
TCAGTCGCCAGCTGGAGCGCAACAACGTAAAGCTGGTCTGGTAGAAGCTT
TCTAGACCAT
BS14413.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:00:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19c-RC | 528 | CG15457-PC | 1..528 | 17..544 | 2640 | 100 | Plus |
Obp19c-RA | 528 | CG15457-PA | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:00:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19c-RC | 789 | CG15457-RC | 11..539 | 17..545 | 2645 | 100 | Plus |
Obp19c-RA | 978 | CG15457-RA | 200..728 | 17..545 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:00:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20418451..20418765 | 331..17 | 1575 | 100 | Minus |
X | 23542271 | X | 20418171..20418385 | 545..331 | 1075 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:00:06 has no hits.
BS14413.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:42 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 1..528 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:37 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..736 | 17..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:43:21 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..727 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:42 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..736 | 17..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:31 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp19c-RA | 200..727 | 17..544 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:31 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20418172..20418384 | 332..544 | 100 | <- | Minus |
X | 20418451..20418765 | 17..331 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:43:21 Download gff for
BS14413.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20289199..20289411 | 332..544 | 100 | <- | Minus |
arm_X | 20289478..20289792 | 17..331 | 100 | | Minus |
BS14413.pep Sequence
Translation from 16 to 543
> BS14413.pep
MKPSTPVAAIPLMTIVVAVLLQTHCVRGQTQAFDLAKLLPKTGTEPIWAV
IDRNLPQVQELVTAARMECIQKLQLPRDQRPLGKVTNPSEKEKCLVECVL
KKIKLMDADNKLNVGQVEKLTSLVTQDNKMAIAVSSSMAQACSRGISSKN
PCEVAHLFNQCISRQLERNNVKLVW*
BS14413.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp19c-PC | 175 | CG15457-PC | 1..175 | 1..175 | 892 | 100 | Plus |
Obp19c-PA | 175 | CG15457-PA | 1..175 | 1..175 | 892 | 100 | Plus |