Clone Sequence Records
BS14429.3prime Sequence
874 bp (758 high quality bases) assembled on 2006-10-13
> BS14429.3prime
ATGGTCTAGAAAGCTTCTAGTTGCGTTTGACTTTAGTGCTTTGAGTTCTC
TCTCCTTTGAGTAATAACTTTTTAAGCAGCTTATAGATAGTAATTGGCAG
TACAATTAGCAACAGAACCATTACTACAAAAATAATTAGGAGCACATCAA
CATTGTGGTACTGCCACCAGTTCAGCCTTTGTGCCGCACTTTTCAAATAG
GCAGCTCCTTGATGGCGGGTCACATGTTCCACCCAGTATATCGCATTTTC
AATTGGCGTTTGTTGTTGATCCCGATATCGGAAGGATATGCCCTGCACCA
CTTTGGTGTAGGATGGCTCACTTGTAATCCGCTCGATTGCTTTCCGGAAT
TCTACGGCATTCAGCGTCTTGAAGTCCAGCATTATGCCATAGCCGTTTTG
CTCGGCATGAGCCATGTTGAAAAACTGATCACTAAAGATCGGCAAACCGA
TCACGGGTTTAGCATGATAAATGGACTCCGTGGTGCTCAGCATGCCGCCG
TGGGTCACAAATGCCATGATCTTGGGATGGGCCAATATGTCCGTCTGTGG
AAACCAGTCGGAAATGTAGACATTCTCCGGTTTGTTGGGCAGGTTATCCA
GCTCAAATTTCCAGAGAACACGCTGTTTGAGCCCACCTAATGCTTTCAGG
ATCTCTTGAACCTTTGATGGGGGTAAGTCCTTGGTCTTGAGATTCGATCC
CATGGAAAAGTAAATGGCTCCATGTTCTGACTCATTGATGAATCTCTCGA
TCTTCTCGGGCAGTGGATTCCACTTTCCGTCGATATGCATGCCACCCACT
TCAATCATGTTGGGTGAGTGCGGGCGCGGAAACTTAGTGAAACATGTTGA
TTGATGAGCACCAAGGAGGCATTT
BS14429.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6658-PA | 1560 | Ugt86Di-RA | 745..1560 | 832..17 | 4055 | 99.8 | Minus |
| CG6658-PA | 1560 | Ugt86Di-RA | 702..746 | 874..830 | 225 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt86Di-RB | 2556 | CG6658-RB | 755..1615 | 874..15 | 4265 | 99.8 | Minus |
| Ugt86Di-RA | 1675 | CG6658-RA | 755..1615 | 874..15 | 4265 | 99.8 | Minus |
| Ugt86Da-RA | 1994 | CG18578-RA | 1161..1345 | 574..390 | 250 | 77 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11151967..11152827 | 15..874 | 4240 | 99.8 | Plus |
| 3R | 32079331 | 3R | 11158911..11159095 | 574..390 | 250 | 75.7 | Minus |
Blast to na_te.dros performed on 2015-02-06 10:15:31 has no hits.
BS14429.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:03 Download gff for
BS14429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6658-PA | 702..1560 | 17..874 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:39:35 Download gff for
BS14429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 755..1615 | 15..874 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:24:58 Download gff for
BS14429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 755..1615 | 15..874 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:24:58 Download gff for
BS14429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11151967..11152827 | 15..874 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:39:35 Download gff for
BS14429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6977689..6978549 | 15..874 | 99 | | Plus |
BS14429.5prime Sequence
836 bp (792 high quality bases) assembled on 2006-10-13
> BS14429.5prime
GAAGTTATCAGTCGACATGCGTACGTTCACCTTGATCTTGGGACTATTGT
GCAGCTTGGGATACTCAAGTGGATACAATTACCTGATGGTTCTGAATTCC
GCCGGTCGTTCCCACTTTAATGTGGGACACGCTTTGGCCAAGGGATTGGT
CAAGGCTGGGCATACAATCACCGTAGTGTCCGTCTTTCCTCAGAAAAAAC
CCATTCCTGGTTATACTGATGTAAGTGTGCCAAATGTGATCGAAGTCATG
GGAGGAGACATTGGAGCCTTGTGGGCATCTATCCAAAAGACATATACTCA
GAATCTCATCGATCATTATCAAATGGGATTTCGCATCACCAGAGGCCTTT
TCGAGGACTCCAATTTCCAGGATTTTCTGAAGAGCAACCAAAGCTTTGAT
GCGATCATATGTGAGACTTTCTACAATGATGCCCACTATGGCTTGGCAGA
GCATTTTAATGCTCCACTGATTGGATTGGCCACCGGTGGAGGTCTGACAT
TTATCACAGATATGGTTGGTTCCCCCGCTCCAGCTTCGTTCGTGCCCCAC
ATAATGCTACCCTTTAACGATCACATGTCGCTGTACGAACGCCTTTTGAA
CGTGGCTTTTCTTGGCTATGAAAGAGTTCTACTGGACTACTATTTCTTAC
CGACTCAGGAGAAGTTATACAAGGAGTTCTTTCCGGGCAACAAGAGGTGT
TTCTATAAGATGCGCCGAAATGCCTCCTTGGTGCTCATCAATCAACATGT
TTCACTAAGTTTTCCGCGACCGCACTCACCCAACATGATTGAAGTGGGTG
GCATGCATATCGACGGAAAGTGGAATCCCCTGCCCG
BS14429.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6658-PA | 1560 | Ugt86Di-RA | 1..820 | 17..836 | 4075 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt86Di-RB | 2556 | CG6658-RB | 53..873 | 16..836 | 4090 | 99.9 | Plus |
| Ugt86Di-RA | 1675 | CG6658-RA | 53..873 | 16..836 | 4090 | 99.9 | Plus |
| Ugt86Da-RA | 1994 | CG18578-RA | 871..953 | 729..811 | 220 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11152709..11153031 | 836..514 | 1600 | 99.7 | Minus |
| 3R | 32079331 | 3R | 11153232..11153495 | 516..253 | 1320 | 100 | Minus |
| 3R | 32079331 | 3R | 11153558..11153797 | 255..16 | 1200 | 100 | Minus |
| 3R | 32079331 | 3R | 11158621..11158703 | 729..811 | 220 | 84.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:37:14 has no hits.
BS14429.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:03 Download gff for
BS14429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6658-PA | 1..820 | 17..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:18:18 Download gff for
BS14429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 43..873 | 5..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:03:27 Download gff for
BS14429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 43..873 | 5..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:03:27 Download gff for
BS14429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11152709..11153030 | 515..836 | 99 | <- | Minus |
| 3R | 11153234..11153493 | 255..514 | 100 | <- | Minus |
| 3R | 11153559..11153806 | 5..254 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:18:18 Download gff for
BS14429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6978431..6978752 | 515..836 | 99 | <- | Minus |
| arm_3R | 6978956..6979215 | 255..514 | 100 | <- | Minus |
| arm_3R | 6979281..6979528 | 5..254 | 98 | | Minus |
BS14429.complete Sequence
1592 bp assembled on 2006-11-01
GenBank Submission: FJ637659
> BS14429.complete
GAAGTTATCAGTCGACATGCGTACGTTCACCTTGATCTTGGGACTATTGT
GCAGCTTGGGATACTCAAGTGGATACAATTACCTGATGGTTCTGAATTCC
GCCGGTCGTTCCCACTTTAATGTGGGACACGCTTTGGCCAAGGGATTGGT
CAAGGCTGGGCATACAATCACCGTAGTGTCCGTCTTTCCTCAGAAAAAAC
CCATTCCTGGTTATACTGATGTAAGTGTGCCAAATGTGATCGAAGTCATG
GGAGGAGACATTGGAGCCTTGTGGGCATCTATCCAAAAGACATATACTCA
GAATCTCATCGATCATTATCAAATGGGATTTCGCATCACCAGAGGCCTTT
TCGAGGACTCCAATTTCCAGGATTTTCTGAAGAGCAACCAAAGCTTTGAT
GCGATCATATGTGAGACTTTCTACAATGATGCCCACTATGGCTTGGCAGA
GCATTTTAATGCTCCACTGATTGGATTGGCCACCGGTGGAGGTCTGACAT
TTATCACAGATATGGTTGGTTCCCCCGCTCCAGCTTCGTTCGTGCCCCAC
ATAATGCTACCCTTTAACGATCACATGTCGCTGTACGAACGCCTTTTGAA
CGTGGCTTTTCTTGGCTATGAAAGAGTTCTACTGGACTACTATTTCTTAC
CGACTCAGGAGAAGTTATACAAGGAGTTCTTTCCGGGCAACAAGAGGTGT
TTCTATAAGATGCGCCGAAATGCCTCCTTGGTGCTCATCAATCAACATGT
TTCACTAAGTTTTCCGCGACCGCACTCACCCAACATGATTGAAGTGGGTG
GCATGCATATCGACGGAAAGTGGAATCCACTGCCCGAGAAGATCGAGAGA
TTCATCAATGAGTCAGAACATGGAGCCATTTACTTTTCCATGGGATCGAA
TCTCAAGACCAAGGACTTACCCCCATCAAAGGTTCAAGAGATCCTGAAAG
CATTAGGTGGGCTCAAACAGCGTGTTCTCTGGAAATTTGAGCTGGATAAC
CTGCCCAACAAACCGGAGAATGTCTACATTTCCGACTGGTTTCCACAGAC
GGACATATTGGCCCATCCCAAGATCATGGCATTTGTGACCCACGGCGGCA
TGCTGAGCACCACGGAGTCCATTTATCATGCTAAACCCGTGATCGGTTTG
CCGATCTTTAGTGATCAGTTTTTCAACATGGCTCATGCCGAGCAAAACGG
CTATGGCATAATGCTGGACTTCAAGACGCTGAATGCCGTAGAATTCCGGA
AAGCAATCGAGCGGATTACAAGTGAGCCATCCTACACCAAAGTGGTGCAG
GGCATATCCTTCCGATATCGGGATCAACAACAAACGCCAATTGAAAATGC
GATATACTGGGTGGAACATGTGACCCGCCATCAAGGAGCTGCCTATTTGA
AAAGTGCGGCACAAAGGCTGAACTGGTGGCAGTACCACAATGTTGATGTG
CTCCTAATTATTTTTGTAGTAATGGTTCTGTTGCTAATTGTACTGCCAAT
TACTATCTATAAGCTGCTTAAAAAGTTATTACTCAAAGGAGAGAGAACTC
AAAGCACTAAAGTCAAACGCAACTAGAAGCTTTCTAGACCAT
BS14429.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt86Di-RB | 1560 | CG6658-PB | 1..1560 | 17..1576 | 7800 | 100 | Plus |
| Ugt86Di-RA | 1560 | CG6658-PA | 1..1560 | 17..1576 | 7800 | 100 | Plus |
| Ugt86Da-RA | 1587 | CG18578-PA | 1018..1202 | 1019..1203 | 250 | 75.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:45:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt86Di-RB | 2556 | CG6658-RB | 53..1615 | 16..1578 | 7815 | 100 | Plus |
| Ugt86Di-RA | 1675 | CG6658-RA | 53..1615 | 16..1578 | 7815 | 100 | Plus |
| Ugt86Da-RA | 1994 | CG18578-RA | 1161..1345 | 1019..1203 | 250 | 75.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:45:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11151967..11153031 | 1578..514 | 5325 | 100 | Minus |
| 3R | 32079331 | 3R | 11153232..11153495 | 516..253 | 1320 | 100 | Minus |
| 3R | 32079331 | 3R | 11153558..11153797 | 255..16 | 1200 | 100 | Minus |
| 3R | 32079331 | 3R | 11158911..11159095 | 1019..1203 | 250 | 75.7 | Plus |
| 3R | 32079331 | 3R | 11158621..11158703 | 729..811 | 220 | 84.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:45:02 has no hits.
BS14429.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:01 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 1..1560 | 17..1576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:10:12 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 1..1560 | 17..1576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:41 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 54..1613 | 17..1576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:01 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 1..1560 | 17..1576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:36 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt86Di-RA | 54..1613 | 17..1576 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:36 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11151969..11153030 | 515..1576 | 100 | <- | Minus |
| 3R | 11153234..11153493 | 255..514 | 100 | <- | Minus |
| 3R | 11153559..11153796 | 17..254 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:41 Download gff for
BS14429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6977691..6978752 | 515..1576 | 100 | <- | Minus |
| arm_3R | 6978956..6979215 | 255..514 | 100 | <- | Minus |
| arm_3R | 6979281..6979518 | 17..254 | 100 | | Minus |
BS14429.pep Sequence
Translation from 16 to 1575
> BS14429.pep
MRTFTLILGLLCSLGYSSGYNYLMVLNSAGRSHFNVGHALAKGLVKAGHT
ITVVSVFPQKKPIPGYTDVSVPNVIEVMGGDIGALWASIQKTYTQNLIDH
YQMGFRITRGLFEDSNFQDFLKSNQSFDAIICETFYNDAHYGLAEHFNAP
LIGLATGGGLTFITDMVGSPAPASFVPHIMLPFNDHMSLYERLLNVAFLG
YERVLLDYYFLPTQEKLYKEFFPGNKRCFYKMRRNASLVLINQHVSLSFP
RPHSPNMIEVGGMHIDGKWNPLPEKIERFINESEHGAIYFSMGSNLKTKD
LPPSKVQEILKALGGLKQRVLWKFELDNLPNKPENVYISDWFPQTDILAH
PKIMAFVTHGGMLSTTESIYHAKPVIGLPIFSDQFFNMAHAEQNGYGIML
DFKTLNAVEFRKAIERITSEPSYTKVVQGISFRYRDQQQTPIENAIYWVE
HVTRHQGAAYLKSAAQRLNWWQYHNVDVLLIIFVVMVLLLIVLPITIYKL
LKKLLLKGERTQSTKVKRN*
BS14429.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt86Di-PB | 519 | CG6658-PB | 1..519 | 1..519 | 2735 | 100 | Plus |
| Ugt86Di-PA | 519 | CG6658-PA | 1..519 | 1..519 | 2735 | 100 | Plus |
| Ugt86Da-PA | 528 | CG18578-PA | 7..528 | 2..519 | 1485 | 54.4 | Plus |
| Ugt86Dc-PA | 521 | CG4739-PA | 9..506 | 7..497 | 1381 | 53.4 | Plus |
| Ugt35b-PA | 516 | CG6649-PA | 42..503 | 42..500 | 988 | 44.3 | Plus |
