Clone Sequence Records
BS14436.3prime Sequence
498 bp (498 high quality bases) assembled on 2006-10-13
> BS14436.3prime
ATGGTCTAGAAAGCTTCTATTGAGATGAGCAGTTGGCATCGGTGTAGAGG
TCCATGTAGTCATCCGAGACGCAAGCGCTGCCAATGGGCATCGGCTGGCA
GATACCTTGCACCTTGCTGACGATTTCCACGTGGCAGGTGCGATGTCCGT
GGGCGGAAAGCTTGTGGAATCCGCTGGTCGGGTGCTTCAGGATGATCTGC
GGCTTGTGGCCAGACCGATGCTTCGTGGCCGGAGTGGGTTCGTCGAAGGT
CAGCCAGTCGGGCGGCATGGAGTGCAGGGACCTGCCGGCGGACTGGTCCC
CGGCCACATCCTGTTCCACCTCCAGTGGCAGGTCCACCCCATCTACGCCG
TCGTCCAGGTCGATGGGGAAACCGACTTTCGATTTGGCCTCATTTTCTGC
ACCCAGTAATTGGGGACTCAGTACCAGGGCGTTGGCAATCAGCAGAGTGG
TGGCACAGTGGAGCAGCAGATGCAGTGGGGCCATGTCGACTGATAACT
BS14436.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-PA | 468 | CG14075-RA | 1..468 | 484..17 | 2340 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:08:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-RA | 674 | CG14075-RA | 54..524 | 484..14 | 2355 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:08:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18985014..18985484 | 484..14 | 2355 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:08:17 has no hits.
BS14436.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:10 Download gff for
BS14436.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-PA | 1..468 | 17..484 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:33:41 Download gff for
BS14436.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 49..529 | 9..490 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:43:17 Download gff for
BS14436.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 49..529 | 9..490 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:43:17 Download gff for
BS14436.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18985009..18985489 | 9..490 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:33:41 Download gff for
BS14436.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18978109..18978589 | 9..490 | 99 | | Minus |
BS14436.5prime Sequence
498 bp (498 high quality bases) assembled on 2006-10-13
> BS14436.5prime
GAAGTTATCAGTCGACATGGCCCCACTGCATCTGCTGCTCCACTGTGCCA
CCACTCTGCTGATTGCCAACGCCCTGGTACTGAGTCCCCAATTACTGGGT
GCAGAAAATGAGGCCAAATCGAAAGTCGGTTTCCCCATCGACCTGGACGA
CGGCGTAGATGGGGTGGACCTGCCACTGGAGGTGGAACAGGATGTGGCCG
GGGACCAGTCCGCCGGCAGGTCCCTGCACTCCATGCCGCCCGACTGGCTG
ACCTTCGACGAACCCACTCCGGCCACGAAGCATCGGTCTGGCCACAAGCC
GCAGATCATCCTGAAGCACCCGACCAGCGGATTCCACAAGCTTTCCGCCC
ACGGACATCGCACCTGCCACGTGGAAATCGTCAGCAAGGTGCAAGGTATC
TGCCAGCCGATGCCCATTGGCAGCGCTTGCGTCTCGGATGACTACATGGA
CCTCTACACCGATGCCAACTGCTCATCTCAATAGAAGCTTTCTAGACC
BS14436.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-PA | 468 | CG14075-RA | 1..468 | 17..484 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:28:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-RA | 674 | CG14075-RA | 54..524 | 17..487 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:28:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18985014..18985484 | 17..487 | 2355 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:28:37 has no hits.
BS14436.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:10 Download gff for
BS14436.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-PA | 1..468 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:21:59 Download gff for
BS14436.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 49..529 | 11..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:05:35 Download gff for
BS14436.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 49..529 | 11..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:05:35 Download gff for
BS14436.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18985009..18985489 | 11..492 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:21:59 Download gff for
BS14436.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18978109..18978589 | 11..492 | 99 | | Plus |
BS14436.complete Sequence
500 bp assembled on 2006-11-01
GenBank Submission: FJ637661
> BS14436.complete
GAAGTTATCAGTCGACATGGCCCCACTGCATCTGCTGCTCCACTGTGCCA
CCACTCTGCTGATTGCCAACGCCCTGGTACTGAGTCCCCAATTACTGGGT
GCAGAAAATGAGGCCAAATCGAAAGTCGGTTTCCCCATCGACCTGGACGA
CGGCGTAGATGGGGTGGACCTGCCACTGGAGGTGGAACAGGATGTGGCCG
GGGACCAGTCCGCCGGCAGGTCCCTGCACTCCATGCCGCCCGACTGGCTG
ACCTTCGACGAACCCACTCCGGCCACGAAGCATCGGTCTGGCCACAAGCC
GCAGATCATCCTGAAGCACCCGACCAGCGGATTCCACAAGCTTTCCGCCC
ACGGACATCGCACCTGCCACGTGGAAATCGTCAGCAAGGTGCAAGGTATC
TGCCAGCCGATGCCCATTGGCAGCGCTTGCGTCTCGGATGACTACATGGA
CCTCTACACCGATGCCAACTGCTCATCTCAATAGAAGCTTTCTAGACCAT
BS14436.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-RA | 468 | CG14075-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-RA | 674 | CG14075-RA | 54..524 | 17..487 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18985014..18985484 | 17..487 | 2355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:50:56 has no hits.
BS14436.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:54 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 1..468 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:45 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 1..468 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:30 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 54..521 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:54 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 1..468 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:14 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14075-RA | 54..521 | 17..484 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:14 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18985014..18985481 | 17..484 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:30 Download gff for
BS14436.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18978114..18978581 | 17..484 | 100 | | Plus |
BS14436.pep Sequence
Translation from 16 to 483
> BS14436.pep
MAPLHLLLHCATTLLIANALVLSPQLLGAENEAKSKVGFPIDLDDGVDGV
DLPLEVEQDVAGDQSAGRSLHSMPPDWLTFDEPTPATKHRSGHKPQIILK
HPTSGFHKLSAHGHRTCHVEIVSKVQGICQPMPIGSACVSDDYMDLYTDA
NCSSQ*
BS14436.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14075-PA | 155 | CG14075-PA | 1..155 | 1..155 | 829 | 100 | Plus |