Clone Sequence Records
BS14437.3prime Sequence
522 bp (522 high quality bases) assembled on 2006-10-13
> BS14437.3prime
ATGGTCTAGAAAGCTTTTAAAGAGGATAAAACTTTAAGCCGTAGATCCTG
CGGACTTCGTGATGACGGGCTCTTCGCGAGCAAGTGGGGCACCGAGAGCT
CTCCCGCAGGACGTTGTTGATGCAGTGGCGCCCAAAGAGGTGGCCACAAC
GCAGGGACACCATGGAATGCCTGCCATGCGGCTCACATTTCAAATCGCAG
ATGGAGCAGATGTTGACTTTGTACAGGAAGTCCAGTGCCTTGTTGAGCGA
TTTCAAATAGCTGTGCGTCTGGGCAATGTGCCTCACCAGCAGAGTGAAGT
ACTCATATTTGCCTAGCTCTTGCTGCAAACTCATTAGAATATTCCCGCGC
CTTGAATGGTATAGATGCATCCGTGATGTGACCGATTCCAGTTGGGCTAG
TCGCTGTTCTGGACTGGCGAAGCTCTCCTCGAGAATGATCTCTTGAATTT
CTTTCTCCTGCTCTTGCAGCTCCTTCAACAAGTCGACAATTTTCGGTAGA
TGTAACATGTCGACTGATAACT
BS14437.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-PA | 492 | CG14983-RA | 1..492 | 508..17 | 2460 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:16:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-RA | 607 | CG14983-RA | 14..505 | 508..17 | 2460 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:16:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3948801..3949292 | 17..508 | 2460 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 10:16:41 has no hits.
BS14437.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:10 Download gff for
BS14437.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-PA | 1..492 | 17..508 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:39:51 Download gff for
BS14437.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 6..508 | 12..517 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:25:09 Download gff for
BS14437.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 6..508 | 12..517 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:25:09 Download gff for
BS14437.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3948798..3949300 | 12..517 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:39:51 Download gff for
BS14437.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3948798..3949300 | 12..517 | 98 | | Plus |
BS14437.5prime Sequence
522 bp (522 high quality bases) assembled on 2006-10-13
> BS14437.5prime
GAAGTTATCAGTCGACATGTTACATCTACCGAAAATTGTCGACTTGTTGA
AGGAGCTGCAAGAGCAGGAGAAAGAAATTCAAGAGATCATTCTCGAGGAG
AGCTTCGCCAGTCCAGAACAGCGACTAGCCCAACTGGAATCGGTCACATC
ACGGATGCATCTATACCATTCAAGGCGCGGGAATATTCTAATGAGTTTGC
AGCAAGAGCTAGGCAAATATGAGTACTTCACTCTGCTGGTGAGGCACATT
GCCCAGACGCACAGCTATTTGAAATCGCTCAACAAGGCACTGGACTTCCT
GTACAAAGTCAACATCTGCTCCATCTGCGATTTGAAATGTGAGCCGCATG
GCAGGCATTCCATGGTGTCCCTGCGTTGTGGCCACCTCTTTGGGCGCCAC
TGCATCAACAACGTCCTGCGGGAGAGCTCTCGGTGCCCCACTTGCTCGCG
AAGAGCCCGTCATCACGAAGTCCGCAGGATCTACGGCTTAAAGTTTTATC
CTCTTTAAAAGCTTTCTAGACC
BS14437.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-PA | 492 | CG14983-RA | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:58:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-RA | 607 | CG14983-RA | 14..505 | 17..508 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:58:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3948801..3949292 | 508..17 | 2460 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:58:52 has no hits.
BS14437.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:11 Download gff for
BS14437.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-PA | 1..492 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:09:00 Download gff for
BS14437.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 6..508 | 8..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:55 Download gff for
BS14437.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 6..508 | 8..513 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:55 Download gff for
BS14437.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3948798..3949300 | 8..513 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:09:00 Download gff for
BS14437.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3948798..3949300 | 8..513 | 98 | | Minus |
BS14437.complete Sequence
524 bp assembled on 2006-11-01
GenBank Submission: FJ637662
> BS14437.complete
GAAGTTATCAGTCGACATGTTACATCTACCGAAAATTGTCGACTTGTTGA
AGGAGCTGCAAGAGCAGGAGAAAGAAATTCAAGAGATCATTCTCGAGGAG
AGCTTCGCCAGTCCAGAACAGCGACTAGCCCAACTGGAATCGGTCACATC
ACGGATGCATCTATACCATTCAAGGCGCGGGAATATTCTAATGAGTTTGC
AGCAAGAGCTAGGCAAATATGAGTACTTCACTCTGCTGGTGAGGCACATT
GCCCAGACGCACAGCTATTTGAAATCGCTCAACAAGGCACTGGACTTCCT
GTACAAAGTCAACATCTGCTCCATCTGCGATTTGAAATGTGAGCCGCATG
GCAGGCATTCCATGGTGTCCCTGCGTTGTGGCCACCTCTTTGGGCGCCAC
TGCATCAACAACGTCCTGCGGGAGAGCTCTCGGTGCCCCACTTGCTCGCG
AAGAGCCCGTCATCACGAAGTCCGCAGGATCTACGGCTTAAAGTTTTATC
CTCTTTAAAAGCTTTCTAGACCAT
BS14437.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-RA | 492 | CG14983-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:52:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-RA | 607 | CG14983-RA | 14..505 | 17..508 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:52:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3948801..3949292 | 508..17 | 2460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:52:08 has no hits.
BS14437.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:37:03 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 1..492 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:28 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 6..508 | 8..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:06 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 19..503 | 22..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:37:04 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 6..508 | 8..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:51 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14983-RA | 19..503 | 22..506 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:51 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3948803..3949287 | 22..506 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:06 Download gff for
BS14437.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3948803..3949287 | 22..506 | 100 | | Minus |
BS14437.pep Sequence
Translation from 16 to 507
> BS14437.pep
MLHLPKIVDLLKELQEQEKEIQEIILEESFASPEQRLAQLESVTSRMHLY
HSRRGNILMSLQQELGKYEYFTLLVRHIAQTHSYLKSLNKALDFLYKVNI
CSICDLKCEPHGRHSMVSLRCGHLFGRHCINNVLRESSRCPTCSRRARHH
EVRRIYGLKFYPL*
BS14437.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14983-PA | 163 | CG14983-PA | 1..163 | 1..163 | 859 | 100 | Plus |
CG17329-PA | 162 | CG17329-PA | 6..159 | 12..160 | 257 | 40.8 | Plus |
CG13481-PC | 176 | CG13481-PC | 35..170 | 26..156 | 217 | 35.3 | Plus |
CG13481-PB | 176 | CG13481-PB | 35..170 | 26..156 | 217 | 35.3 | Plus |