Clone Sequence Records
BS14451.3prime Sequence
435 bp (435 high quality bases) assembled on 2006-10-13
> BS14451.3prime
ATGGTCTAGAAAGCTTCTAGAGCGACTCAATGCTGGACTTCTTGTTCTTG
CTCATGCCAAAGTATCCCCACCAGGAGCGGCGCGACCTCGCCTCGTCGGC
TGGAGCAGCACTGGTGGCCATCGAGGCGGTGGCGTTGCGCACAGCTCCTC
GGGAGGCGGTCGCCAGAGGTTGCTCCGCATTATCCTCATTGCTGCTGACA
CTGGACTCAGGAGGATTGGCAGCGGTGGTACTACGGCGACCGGCGGACTT
GCCGGATTTAGCCGACTTCGCTGACTTCGCTGACTTGGCGGACTTGACGG
TGTCCATGGAGACCTGGGTCACATTGGCCAGGCTGGGCAGTGGGGTGACG
CCTCCATCGCGGGTGCGACGCTGCCGGCGATCGCCTCCACCGAAGAGCTT
ACTCAAATACGGCATGCACATGTCGACTGATAACT
BS14451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-PA | 405 | CG13010-RA | 1..405 | 421..17 | 2025 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-RA | 681 | CG13010-RA | 103..508 | 421..16 | 2030 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16678438..16678843 | 16..421 | 2030 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 03:52:37 has no hits.
BS14451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:21 Download gff for
BS14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-PA | 1..405 | 17..421 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:31:14 Download gff for
BS14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 99..510 | 12..429 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:58 Download gff for
BS14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 99..510 | 12..429 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:58 Download gff for
BS14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16678436..16678847 | 12..429 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:31:14 Download gff for
BS14451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16572469..16572880 | 12..429 | 98 | | Plus |
BS14451.5prime Sequence
435 bp (435 high quality bases) assembled on 2006-10-13
> BS14451.5prime
GAAGTTATCAGTCGACATGTGCATGCCGTATTTGAGTAAGCTCTTCGGTG
GAGGCGATCGCCGGCAGCGTCGCACCCGCGATGGAGGCGTCACCCCACTG
CCCAGCCTGGCCAATGTGACCCAGGTCTCCATGGACACCGTCAAGTCCGC
CAAGTCAGCGAAGTCAGCGAAGTCGGCTAAATCCGGCAAGTCCGCCGGTC
GCCGTAGTACCACCGCTGCCAATCCTCCTGAGTCCAGTGTCAGCAGCAAT
GAGGATAATGCGGAGCAACCTCTGGCGACCGCCTCCCGAGGAGCTGTGCG
CAACGCCACCGCCTCGATGGCCACCAGTGCTGCTCCAGCCGACGAGGCGA
GGTCGCGCCGCTCCTGGTGGGGATACTTTGGCATGAGCAAGAACAAGAAG
TCCAGCATTGAGTCGCTCTAGAAGCTTTCTAGACC
BS14451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-PA | 405 | CG13010-RA | 1..405 | 17..421 | 2025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:36:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-RA | 681 | CG13010-RA | 103..508 | 17..422 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:36:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16678438..16678843 | 422..17 | 2030 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:36:09 has no hits.
BS14451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:22 Download gff for
BS14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-PA | 1..405 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:29:28 Download gff for
BS14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 99..510 | 9..426 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:37:50 Download gff for
BS14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 99..510 | 9..426 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:37:50 Download gff for
BS14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16678436..16678847 | 9..426 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:29:28 Download gff for
BS14451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16572469..16572880 | 9..426 | 98 | | Minus |
BS14451.complete Sequence
437 bp assembled on 2006-11-01
GenBank Submission: FJ637668
> BS14451.complete
GAAGTTATCAGTCGACATGTGCATGCCGTATTTGAGTAAGCTCTTCGGTG
GAGGCGATCGCCGGCAGCGTCGCACCCGCGATGGAGGCGTCACCCCACTG
CCCAGCCTGGCCAATGTGACCCAGGTCTCCATGGACACCGTCAAGTCCGC
CAAGTCAGCGAAGTCAGCGAAGTCGGCTAAATCCGGCAAGTCCGCCGGTC
GCCGTAGTACCACCGCTGCCAATCCTCCTGAGTCCAGTGTCAGCAGCAAT
GAGGATAATGCGGAGCAACCTCTGGCGACCGCCTCCCGAGGAGCTGTGCG
CAACGCCACCGCCTCGATGGCCACCAGTGCTGCTCCAGCCGACGAGGCGA
GGTCGCGCCGCTCCTGGTGGGGATACTTTGGCATGAGCAAGAACAAGAAG
TCCAGCATTGAGTCGCTCTAGAAGCTTTCTAGACCAT
BS14451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:59:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-RA | 405 | CG13010-PA | 1..405 | 17..421 | 2025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-RA | 681 | CG13010-RA | 103..508 | 17..422 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16678438..16678843 | 422..17 | 2030 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:59:08 has no hits.
BS14451.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:24 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:50:58 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:06 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 103..507 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:24 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:41 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 103..507 | 17..421 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:41 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16678439..16678843 | 17..421 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:06 Download gff for
BS14451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16572472..16572876 | 17..421 | 100 | | Minus |
BS14451.pep Sequence
Translation from 16 to 420
> BS14451.pep
MCMPYLSKLFGGGDRRQRRTRDGGVTPLPSLANVTQVSMDTVKSAKSAKS
AKSAKSGKSAGRRSTTAANPPESSVSSNEDNAEQPLATASRGAVRNATAS
MATSAAPADEARSRRSWWGYFGMSKNKKSSIESL*
BS14451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-PA | 134 | CG13010-PA | 1..134 | 1..134 | 672 | 100 | Plus |