Clone Sequence Records
BS14452.3prime Sequence
399 bp (399 high quality bases) assembled on 2006-10-13
> BS14452.3prime
ATGGTCTAGAAAGCTTCTAACCACAGCCAGGACCATCGATGCGAGCGCCC
TCCATGCAGGGATACGGCTTGCATGTGGTGTTGTTGGAAGACGACGCACC
CTGATCCCCTCCAGTGCCCGCTGCTCCGCCCATACGAGCGGCGGCGGCCA
GGACCTCGACGGTGCTATATATGTTGGCCACGATTACCATGCCGCCCGCA
GCTCCGCTGGGCAAACTGTTGGGATCCGTTGCATCCGTTGGAGAACCATT
GGTGGTCGTAGTAGTTGGCTGACAGTTGGGTGAGCATTGCTGGCCGGGAA
TCTCGGGAATGGCACACGCCTTGCTGGGATGTGGGCCAATGTAGAAGGGA
TTGAAGGGTTTGTCGTCGGACTCGAGGGTTTTCATGTCGACTGATAACT
BS14452.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:47:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-PA | 369 | CG15198-RA | 1..369 | 385..17 | 1845 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:36:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 650 | CG15198-RA | 173..544 | 386..15 | 1860 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:36:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11248408..11248779 | 386..15 | 1860 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:36:19 has no hits.
BS14452.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:22 Download gff for
BS14452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-PA | 1..369 | 17..385 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:29:29 Download gff for
BS14452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..544 | 15..393 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:37:53 Download gff for
BS14452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..544 | 15..393 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:37:53 Download gff for
BS14452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11248402..11248779 | 15..393 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:29:29 Download gff for
BS14452.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11142435..11142812 | 15..393 | 99 | | Minus |
BS14452.5prime Sequence
399 bp (399 high quality bases) assembled on 2006-10-13
> BS14452.5prime
GAAGTTATCAGTCGACATGAAAACCCTCGAGTCCGACGACAAACCCTTCA
ATCCCTTCTACATTGGCCCACATCCCAGCAAGGCGTGTGCCATTCCCGAG
ATTCCCGGCCAGCAATGCTCACCCAACTGTCAGCCAACTACTACGACCAC
CAATGGTTCTCCAACGGATGCAACGGATCCCAACAGTTTGCCCAGCGGAG
CTGCGGGCGGCATGGTAATCGTGGCCAACATATATAGCACCGTCGAGGTC
CTGGCCGCCGCCGCTCGTATGGGCGGAGCAGCGGGCACTGGAGGGGATCA
GGGTGCGTCGTCTTCCAACAACACCACATGCAAGCCGTATCCCTGCATGG
AGGGCGCTCGCATCGATGGTCCTGGCTGTGGTTAGAAGCTTTCTAGACC
BS14452.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-PA | 369 | CG15198-RA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:06:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 650 | CG15198-RA | 173..544 | 16..387 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:06:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11248408..11248779 | 16..387 | 1860 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:06:15 has no hits.
BS14452.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:23 Download gff for
BS14452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-PA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:44:14 Download gff for
BS14452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..544 | 9..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:21:38 Download gff for
BS14452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 167..544 | 9..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:21:38 Download gff for
BS14452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11248402..11248779 | 9..387 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:44:14 Download gff for
BS14452.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11142435..11142812 | 9..387 | 99 | | Plus |
BS14452.complete Sequence
401 bp assembled on 2006-11-01
GenBank Submission: FJ637669
> BS14452.complete
GAAGTTATCAGTCGACATGAAAACCCTCGAGTCCGACGACAAACCCTTCA
ATCCCTTCTACATTGGCCCACATCCCAGCAAGGCGTGTGCCATTCCCGAG
ATTCCCGGCCAGCAATGCTCACCCAACTGTCAGCCAACTACTACGACCAC
CAATGGTTCTCCAACGGATGCAACGGATCCCAACAGTTTGCCCAGCGGAG
CTGCGGGCGGCATGGTAATCGTGGCCAACATATATAGCACCGTCGAGGTC
CTGGCCGCCGCCGCTCGTATGGGCGGAGCAGCGGGCACTGGAGGGGATCA
GGGTGCGTCGTCTTCCAACAACACCACATGCAAGCCGTATCCCTGCATGG
AGGGCGCTCGCATCGATGGTCCTGGCTGTGGTTAGAAGCTTTCTAGACCA
T
BS14452.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:09:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 369 | CG15198-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-RA | 650 | CG15198-RA | 173..544 | 16..387 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11248408..11248779 | 16..387 | 1860 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:09:57 has no hits.
BS14452.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:15 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:53:26 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:53:50 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 174..542 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:15 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 1..369 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:39 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15198-RA | 174..542 | 17..385 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:39 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11248409..11248777 | 17..385 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:53:50 Download gff for
BS14452.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11142442..11142810 | 17..385 | 100 | | Plus |
BS14452.pep Sequence
Translation from 16 to 384
> BS14452.pep
MKTLESDDKPFNPFYIGPHPSKACAIPEIPGQQCSPNCQPTTTTTNGSPT
DATDPNSLPSGAAGGMVIVANIYSTVEVLAAAARMGGAAGTGGDQGASSS
NNTTCKPYPCMEGARIDGPGCG*
BS14452.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15198-PA | 122 | CG15198-PA | 1..122 | 1..122 | 665 | 100 | Plus |