Clone Sequence Records
BS14462.3prime Sequence
657 bp (657 high quality bases) assembled on 2006-10-13
> BS14462.3prime
ATGGTCTAGAAAGCTTCTAATCCTCGGGTTCCGTCTGGGGCACCTCGTTA
TCGGCAGCTGGGTTCACTGGCACCGACTGGCCAATTTGCGACGATGGCGG
GAACAACTGGGCCGCGTGCGTGAGCTTGGCCAGCGCATCCTGATCCAGAA
TCTGTGGCTTGTCCGCGGCACTGGTGTTCGATCTGCTCAGTTGATAGAAG
GCGGTGTCGCTGTGCGTGATGTTCACAATGCTTCCGGTCAGGGGAAGGGT
TTCTAGGAGTTCCTGGGGGCTGCTGAAGGCTCCCAGATTCACGGGTGCGA
TGCCGGTCAGCACTTGACCGGTGACATTGGTCTGGATGGGCAGCGGGATG
TTGCCCAGGTCAATGTGACTCTTGTTGCTGTGCGTGTCGTAGAAGGTCAG
ATCCACGCGTTCCTGGCTCTCAAAACTGGTGTCATTCTCGCCCACCTCCG
TCAGGATGCCGATCTCATAGACCACCGCCTTGACCACATAGAGATTCTTG
GGCGTATCGTTGACGCTGGCCCTCAGCTCCTCGATGGTGGCGTTGTCGAT
GCCTGAACTGGCATCCAAAACGGGCAGGGAACAGCCGATGGCCAACAGCA
TGCCGAGCACGGCGGCTCCAAACACAGCCTGGTGGACCTGCATGTCGACT
GATAACT
BS14462.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-PA | 627 | CG14949-RA | 1..627 | 643..17 | 3135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:43:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..705 | 643..17 | 3135 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642413..2642887 | 17..491 | 2375 | 100 | Plus |
| 3L | 28110227 | 3L | 2643195..2643346 | 492..643 | 760 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:43:57 has no hits.
BS14462.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:31 Download gff for
BS14462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-PA | 1..627 | 17..643 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:41:11 Download gff for
BS14462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 8..643 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:59:47 Download gff for
BS14462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 8..643 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:59:47 Download gff for
BS14462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2642406..2642887 | 8..491 | 99 | <- | Plus |
| 3L | 2643195..2643346 | 492..643 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:41:11 Download gff for
BS14462.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642406..2642887 | 8..491 | 99 | <- | Plus |
| arm_3L | 2643195..2643346 | 492..643 | 100 | | Plus |
BS14462.5prime Sequence
657 bp (657 high quality bases) assembled on 2006-10-13
> BS14462.5prime
GAAGTTATCAGTCGACATGCAGGTCCACCAGGCTGTGTTTGGAGCCGCCG
TGCTCGGCATGCTGTTGGCCATCGGCTGTTCCCTGCCCGTTTTGGATGCC
AGTTCAGGCATCGACAACGCCACCATCGAGGAGCTGAGGGCCAGCGTCAA
CGATACGCCCAAGAATCTCTATGTGGTCAAGGCGGTGGTCTATGAGATCG
GCATCCTGACGGAGGTGGGCGAGAATGACACCAGTTTTGAGAGCCAGGAA
CGCGTGGATCTGACCTTCTACGACACGCACAGCAACAAGAGTCACATTGA
CCTGGGCAACATCCCGCTGCCCATCCAGACCAATGTCACCGGTCAAGTGC
TGACCGGCATCGCACCCGTGAATCTGGGAGCCTTCAGCAGCCCCCAGGAA
CTCCTAGAAACCCTTCCCCTGACCGGAAGCATTGTGAACATCACGCACAG
CGACACCGCCTTCTATCAACTGAGCAGATCGAACACCAGTGCCGCGGACA
AGCCACAGATTCTGGATCAGGATGCGCTGGCCAAGCTCACGCACGCGGCC
CAGTTGTTCCCGCCATCGTCGCAAATTGGCCAGTCGGTGCCAGTGAACCC
AGCTGCCGATAACGAGGTGCCCCAGACGGAACCCGAGGATTAGAAGCTTT
CTAGACC
BS14462.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-PA | 627 | CG14949-RA | 1..627 | 17..643 | 3135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..705 | 17..643 | 3135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642413..2642887 | 643..169 | 2375 | 100 | Minus |
| 3L | 28110227 | 3L | 2643195..2643346 | 168..17 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:07:07 has no hits.
BS14462.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:31 Download gff for
BS14462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-PA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:44:28 Download gff for
BS14462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 17..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:23:26 Download gff for
BS14462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 17..652 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:23:26 Download gff for
BS14462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2642406..2642887 | 169..652 | 99 | <- | Minus |
| 3L | 2643195..2643346 | 17..168 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:44:28 Download gff for
BS14462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642406..2642887 | 169..652 | 99 | <- | Minus |
| arm_3L | 2643195..2643346 | 17..168 | 100 | | Minus |
BS14462.complete Sequence
659 bp assembled on 2006-11-01
GenBank Submission: FJ637673
> BS14462.complete
GAAGTTATCAGTCGACATGCAGGTCCACCAGGCTGTGTTTGGAGCCGCCG
TGCTCGGCATGCTGTTGGCCATCGGCTGTTCCCTGCCCGTTTTGGATGCC
AGTTCAGGCATCGACAACGCCACCATCGAGGAGCTGAGGGCCAGCGTCAA
CGATACGCCCAAGAATCTCTATGTGGTCAAGGCGGTGGTCTATGAGATCG
GCATCCTGACGGAGGTGGGCGAGAATGACACCAGTTTTGAGAGCCAGGAA
CGCGTGGATCTGACCTTCTACGACACGCACAGCAACAAGAGTCACATTGA
CCTGGGCAACATCCCGCTGCCCATCCAGACCAATGTCACCGGTCAAGTGC
TGACCGGCATCGCACCCGTGAATCTGGGAGCCTTCAGCAGCCCCCAGGAA
CTCCTAGAAACCCTTCCCCTGACCGGAAGCATTGTGAACATCACGCACAG
CGACACCGCCTTCTATCAACTGAGCAGATCGAACACCAGTGCCGCGGACA
AGCCACAGATTCTGGATCAGGATGCGCTGGCCAAGCTCACGCACGCGGCC
CAGTTGTTCCCGCCATCGTCGCAAATTGGCCAGTCGGTGCCAGTGAACCC
AGCTGCCGATAACGAGGTGCCCCAGACGGAACCCGAGGATTAGAAGCTTT
CTAGACCAT
BS14462.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 627 | CG14949-PA | 1..627 | 17..643 | 3135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..705 | 17..643 | 3135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642413..2642887 | 643..169 | 2375 | 100 | Minus |
| 3L | 28110227 | 3L | 2643195..2643346 | 168..17 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:07:40 has no hits.
BS14462.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:24:16 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:55:33 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:39 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..705 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:24:16 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 17..643 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:11:21 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..705 | 17..643 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:11:21 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2642413..2642887 | 169..643 | 100 | <- | Minus |
| 3L | 2643195..2643346 | 17..168 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:39 Download gff for
BS14462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642413..2642887 | 169..643 | 100 | <- | Minus |
| arm_3L | 2643195..2643346 | 17..168 | 100 | | Minus |
BS14462.pep Sequence
Translation from 16 to 642
> BS14462.pep
MQVHQAVFGAAVLGMLLAIGCSLPVLDASSGIDNATIEELRASVNDTPKN
LYVVKAVVYEIGILTEVGENDTSFESQERVDLTFYDTHSNKSHIDLGNIP
LPIQTNVTGQVLTGIAPVNLGAFSSPQELLETLPLTGSIVNITHSDTAFY
QLSRSNTSAADKPQILDQDALAKLTHAAQLFPPSSQIGQSVPVNPAADNE
VPQTEPED*
BS14462.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:17:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-PA | 208 | CG14949-PA | 1..208 | 1..208 | 1048 | 100 | Plus |
