Clone BS14463 Report

Search the DGRC for BS14463

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:144
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG15642-RA
Protein status:BS14463.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14463.3prime Sequence

582 bp (582 high quality bases) assembled on 2006-10-13

> BS14463.3prime
ATGGTCTAGAAAGCTTCTACGATTCCGGGTAGCGTCGCACGCGTCGCTTT
TGCTCATTGGTCGTGGGTGTGCCCACACTGGCGGATTGCTGCTGCTCCTC
CTCATCCTCCTCCGGCAGCTGCTCGTTCCCTTCTAGCGGCAGCGGCAGCT
TACAGCCTGGCTTGCAGATAACAAAGTGCACCAGAGACACGATCACCTCG
AGAACTATTAGCGCGAACACGGCGTTCGTGATGATGCGTAGCCACAAACT
GCGTCCGGCAGCTGAGAGGCGAAGAAAGACCATGGCGGGCAGCAGGATGC
ATGGTGTCACGGTGAGCAGCATCCACATGGCGGTGGCGCCAGAGCACAGG
TTCACCGAGTAGCCGGCGTATAGGCGTACGGATTCAGCGGACACCGCCAA
AACGTAGGCCACCAGCATGGACAGGCCCTCCAGGTTCCACAAATGATGCA
GGCGTATGAGCATGTGGATCATGTAGCTCATGGCCCACACCATGGACACA
TACGTGTTGGCCTGCAGCAGCATTTGCAGCACCAGGTTGGCCCGATGCGG
CGTCACCGAGTACGCCATGTCGACTGATAACT

BS14463.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-PA 552 CG15642-RA 1..552 568..17 2760 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-RB 1489 CG15642-RB 284..840 573..17 2770 99.8 Minus
CG15642-RA 1261 CG15642-RA 56..612 573..17 2770 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15466833..15467267 17..451 2175 100 Plus
X 23542271 X 15467353..15467474 452..573 595 99.2 Plus
Blast to na_te.dros performed 2015-02-03 06:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6887 150..43 115 58.6 Minus

BS14463.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:31 Download gff for BS14463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15642-PA 1..552 17..568 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:29:47 Download gff for BS14463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 53..612 17..576 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:06 Download gff for BS14463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 53..612 17..576 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:06 Download gff for BS14463.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15466834..15467267 18..451 100 <- Plus
X 15467353..15467477 452..576 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:29:47 Download gff for BS14463.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15360867..15361300 18..451 100 <- Plus
arm_X 15361386..15361510 452..576 98   Plus

BS14463.5prime Sequence

582 bp (582 high quality bases) assembled on 2006-10-13

> BS14463.5prime
GAAGTTATCAGTCGACATGGCGTACTCGGTGACGCCGCATCGGGCCAACC
TGGTGCTGCAAATGCTGCTGCAGGCCAACACGTATGTGTCCATGGTGTGG
GCCATGAGCTACATGATCCACATGCTCATACGCCTGCATCATTTGTGGAA
CCTGGAGGGCCTGTCCATGCTGGTGGCCTACGTTTTGGCGGTGTCCGCTG
AATCCGTACGCCTATACGCCGGCTACTCGGTGAACCTGTGCTCTGGCGCC
ACCGCCATGTGGATGCTGCTCACCGTGACACCATGCATCCTGCTGCCCGC
CATGGTCTTTCTTCGCCTCTCAGCTGCCGGACGCAGTTTGTGGCTACGCA
TCATCACGAACGCCGTGTTCGCGCTAATAGTTCTCGAGGTGATCGTGTCT
CTGGTGCACTTTGTTATCTGCAAGCCAGGCTGTAAGCTGCCGCTGCCGCT
AGAAGGGAACGAGCAGCTGCCGGAGGAGGATGAGGAGGAGCAGCAGCAAT
CCGCCAGTGTGGGCACACCCACGACCAATGAGCAAAAGCGACGCGTGCGA
CGCTACCCGGAATCGTAGAAGCTTTCTAGACC

BS14463.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-PA 552 CG15642-RA 1..552 17..568 2760 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-RB 1489 CG15642-RB 284..840 12..568 2770 99.8 Plus
CG15642-RA 1261 CG15642-RA 56..612 12..568 2770 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15466833..15467267 568..134 2175 100 Minus
X 23542271 X 15467353..15467474 133..12 595 99.2 Minus
Blast to na_te.dros performed 2015-01-31 10:09:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6887 435..542 115 58.6 Plus

BS14463.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:32 Download gff for BS14463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15642-PA 1..552 17..568 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:34:03 Download gff for BS14463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 53..612 9..568 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:43:36 Download gff for BS14463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 53..612 9..568 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:43:36 Download gff for BS14463.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15466833..15467267 134..568 100 <- Minus
X 15467353..15467477 9..133 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:34:03 Download gff for BS14463.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15360866..15361300 134..568 100 <- Minus
arm_X 15361386..15361510 9..133 98   Minus

BS14463.complete Sequence

584 bp assembled on 2006-11-01

GenBank Submission: FJ637674

> BS14463.complete
GAAGTTATCAGTCGACATGGCGTACTCGGTGACGCCGCATCGGGCCAACC
TGGTGCTGCAAATGCTGCTGCAGGCCAACACGTATGTGTCCATGGTGTGG
GCCATGAGCTACATGATCCACATGCTCATACGCCTGCATCATTTGTGGAA
CCTGGAGGGCCTGTCCATGCTGGTGGCCTACGTTTTGGCGGTGTCCGCTG
AATCCGTACGCCTATACGCCGGCTACTCGGTGAACCTGTGCTCTGGCGCC
ACCGCCATGTGGATGCTGCTCACCGTGACACCATGCATCCTGCTGCCCGC
CATGGTCTTTCTTCGCCTCTCAGCTGCCGGACGCAGTTTGTGGCTACGCA
TCATCACGAACGCCGTGTTCGCGCTAATAGTTCTCGAGGTGATCGTGTCT
CTGGTGCACTTTGTTATCTGCAAGCCAGGCTGTAAGCTGCCGCTGCCGCT
AGAAGGGAACGAGCAGCTGCCGGAGGAGGATGAGGAGGAGCAGCAGCAAT
CCGCCAGTGTGGGCACACCCACGACCAATGAGCAAAAGCGACGCGTGCGA
CGCTACCCGGAATCGTAGAAGCTTTCTAGACCAT

BS14463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-RB 552 CG15642-PB 1..552 17..568 2760 100 Plus
CG15642-RA 552 CG15642-PA 1..552 17..568 2760 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-RB 1489 CG15642-RB 284..840 12..568 2770 99.8 Plus
CG15642-RA 1261 CG15642-RA 56..612 12..568 2770 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15466833..15467267 568..134 2175 100 Minus
X 23542271 X 15467353..15467474 133..12 595 99.2 Minus
Blast to na_te.dros performed 2014-11-27 01:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6887 435..542 115 58.6 Plus

BS14463.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:55 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 1..552 17..568 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:54 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 1..552 17..568 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:36 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 61..612 17..568 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:55 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 1..552 17..568 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:29:58 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
CG15642-RA 61..612 17..568 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:29:58 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
X 15466833..15467267 134..568 100 <- Minus
X 15467353..15467469 17..133 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:36 Download gff for BS14463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15360866..15361300 134..568 100 <- Minus
arm_X 15361386..15361502 17..133 100   Minus

BS14463.pep Sequence

Translation from 16 to 567

> BS14463.pep
MAYSVTPHRANLVLQMLLQANTYVSMVWAMSYMIHMLIRLHHLWNLEGLS
MLVAYVLAVSAESVRLYAGYSVNLCSGATAMWMLLTVTPCILLPAMVFLR
LSAAGRSLWLRIITNAVFALIVLEVIVSLVHFVICKPGCKLPLPLEGNEQ
LPEEDEEEQQQSASVGTPTTNEQKRRVRRYPES*

BS14463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15642-PB 183 CG15642-PB 1..183 1..183 935 100 Plus
CG15642-PA 183 CG15642-PA 1..183 1..183 935 100 Plus