Clone BS14466 Report

Search the DGRC for BS14466

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:144
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG15536-RA
Protein status:BS14466.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14466.3prime Sequence

597 bp (597 high quality bases) assembled on 2006-10-13

> BS14466.3prime
ATGGTCTAGAAAGCTTCTATGGACACTCCTCCTCCAGATAGCGTAGCATC
TCGTGGGGAATGCCCAGCCGAGTAAGGAGATCGCTTCTTGAGAGTCCTGG
CTCCGCCATAGTTAGTAGGTCACCCACAGAAGCTTTGAATCCCTGCCGCC
AGATTTCTATATCGCCCTGTAGCTCAACGATTTTACTGCTCTGTGGACTG
TTTTCAAGCTGGTTCTTCTGGTTGCCGTGCTCCTGTATCTCCTCTGGCGC
ATCAAGAGCCTCTTGAGCATCATTCCTTTCCTTTTTATCCTTTTTTGCTG
TTTTCTTCACTATTTCCCGTTCCTCGTCCTTAATTCCGTGGGCCGCAGCA
AACTCTAGCTTCTTCTTGGACAAGCCTGTCCTGCTTTTGGACAATCCTAT
CCTGCGAGAGCTCAGCGATAAAGGCGGTGCCCGCGGAGTCTCCTGTTCAC
TACATTTTGGTGTATTTGCAGCGGAATCGTCTCTCTGAAGTCTTATTAAG
GGCGTTGACTGGCAACCACGCCTACTCAATCCGAGTCGGGGTCTCCGTCC
GGATTGAGGCGTGTTATTTGCCTCACCAGGCATGTCGACTGATAACT

BS14466.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-PA 567 CG15536-RA 1..567 583..17 2835 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-RA 664 CG15536-RA 26..592 583..17 2835 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30424571..30425137 17..583 2835 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:41:53 has no hits.

BS14466.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:34 Download gff for BS14466.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15536-PA 1..567 17..583 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:19:03 Download gff for BS14466.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 26..592 17..583 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:04:07 Download gff for BS14466.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 26..592 17..583 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:04:07 Download gff for BS14466.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30424571..30425137 17..583 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:19:03 Download gff for BS14466.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26250293..26250859 17..583 100   Plus

BS14466.5prime Sequence

597 bp (597 high quality bases) assembled on 2006-10-13

> BS14466.5prime
GAAGTTATCAGTCGACATGCCTGGTGAGGCAAATAACACGCCTCAATCCG
GACGGAGACCCCGACTCGGATTGAGTAGGCGTGGTTGCCAGTCAACGCCC
TTAATAAGACTTCAGAGAGACGATTCCGCTGCAAATACACCAAAATGTAG
TGAACAGGAGACTCCGCGGGCACCGCCTTTATCGCTGAGCTCTCGCAGGA
TAGGATTGTCCAAAAGCAGGACAGGCTTGTCCAAGAAGAAGCTAGAGTTT
GCTGCGGCCCACGGAATTAAGGACGAGGAACGGGAAATAGTGAAGAAAAC
AGCAAAAAAGGATAAAAAGGAAAGGAATGATGCTCAAGAGGCTCTTGATG
CGCCAGAGGAGATACAGGAGCACGGCAACCAGAAGAACCAGCTTGAAAAC
AGTCCACAGAGCAGTAAAATCGTTGAGCTACAGGGCGATATAGAAATCTG
GCGGCAGGGATTCAAAGCTTCTGTGGGTGACCTACTAACTATGGCGGAGC
CAGGACTCTCAAGAAGCGATCTCCTTACTCGGCTGGGCATTCCCCACGAG
ATGCTACGCTATCTGGAGGAGGAGTGTCCATAGAAGCTTTCTAGACC

BS14466.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-PA 567 CG15536-RA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-RA 664 CG15536-RA 26..592 17..583 2835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:44:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30424571..30425137 583..17 2835 100 Minus
Blast to na_te.dros performed on 2015-02-12 17:44:09 has no hits.

BS14466.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:34 Download gff for BS14466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15536-PA 1..567 17..583 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:41:16 Download gff for BS14466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 26..592 17..583 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:26 Download gff for BS14466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 26..592 17..583 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:26 Download gff for BS14466.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30424571..30425137 17..583 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:41:16 Download gff for BS14466.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26250293..26250859 17..583 100   Minus

BS14466.complete Sequence

599 bp assembled on 2006-11-01

GenBank Submission: FJ637675

> BS14466.complete
GAAGTTATCAGTCGACATGCCTGGTGAGGCAAATAACACGCCTCAATCCG
GACGGAGACCCCGACTCGGATTGAGTAGGCGTGGTTGCCAGTCAACGCCC
TTAATAAGACTTCAGAGAGACGATTCCGCTGCAAATACACCAAAATGTAG
TGAACAGGAGACTCCGCGGGCACCGCCTTTATCGCTGAGCTCTCGCAGGA
TAGGATTGTCCAAAAGCAGGACAGGCTTGTCCAAGAAGAAGCTAGAGTTT
GCTGCGGCCCACGGAATTAAGGACGAGGAACGGGAAATAGTGAAGAAAAC
AGCAAAAAAGGATAAAAAGGAAAGGAATGATGCTCAAGAGGCTCTTGATG
CGCCAGAGGAGATACAGGAGCACGGCAACCAGAAGAACCAGCTTGAAAAC
AGTCCACAGAGCAGTAAAATCGTTGAGCTACAGGGCGATATAGAAATCTG
GCGGCAGGGATTCAAAGCTTCTGTGGGTGACCTACTAACTATGGCGGAGC
CAGGACTCTCAAGAAGCGATCTCCTTACTCGGCTGGGCATTCCCCACGAG
ATGCTACGCTATCTGGAGGAGGAGTGTCCATAGAAGCTTTCTAGACCAT

BS14466.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:52:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-RA 567 CG15536-PA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:52:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-RA 664 CG15536-RA 26..592 17..583 2835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30424571..30425137 583..17 2835 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:52:38 has no hits.

BS14466.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:19 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 1..567 17..583 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:23 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 1..567 17..583 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:01:24 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 26..592 17..583 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:19 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 1..567 17..583 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:15 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
CG15536-RA 26..592 17..583 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:15 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30424571..30425137 17..583 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:01:24 Download gff for BS14466.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26250293..26250859 17..583 100   Minus

BS14466.pep Sequence

Translation from 16 to 582

> BS14466.pep
MPGEANNTPQSGRRPRLGLSRRGCQSTPLIRLQRDDSAANTPKCSEQETP
RAPPLSLSSRRIGLSKSRTGLSKKKLEFAAAHGIKDEEREIVKKTAKKDK
KERNDAQEALDAPEEIQEHGNQKNQLENSPQSSKIVELQGDIEIWRQGFK
ASVGDLLTMAEPGLSRSDLLTRLGIPHEMLRYLEEECP*

BS14466.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15536-PA 188 CG15536-PA 1..188 1..188 964 100 Plus