Clone Sequence Records
BS14466.3prime Sequence
597 bp (597 high quality bases) assembled on 2006-10-13
> BS14466.3prime
ATGGTCTAGAAAGCTTCTATGGACACTCCTCCTCCAGATAGCGTAGCATC
TCGTGGGGAATGCCCAGCCGAGTAAGGAGATCGCTTCTTGAGAGTCCTGG
CTCCGCCATAGTTAGTAGGTCACCCACAGAAGCTTTGAATCCCTGCCGCC
AGATTTCTATATCGCCCTGTAGCTCAACGATTTTACTGCTCTGTGGACTG
TTTTCAAGCTGGTTCTTCTGGTTGCCGTGCTCCTGTATCTCCTCTGGCGC
ATCAAGAGCCTCTTGAGCATCATTCCTTTCCTTTTTATCCTTTTTTGCTG
TTTTCTTCACTATTTCCCGTTCCTCGTCCTTAATTCCGTGGGCCGCAGCA
AACTCTAGCTTCTTCTTGGACAAGCCTGTCCTGCTTTTGGACAATCCTAT
CCTGCGAGAGCTCAGCGATAAAGGCGGTGCCCGCGGAGTCTCCTGTTCAC
TACATTTTGGTGTATTTGCAGCGGAATCGTCTCTCTGAAGTCTTATTAAG
GGCGTTGACTGGCAACCACGCCTACTCAATCCGAGTCGGGGTCTCCGTCC
GGATTGAGGCGTGTTATTTGCCTCACCAGGCATGTCGACTGATAACT
BS14466.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-PA | 567 | CG15536-RA | 1..567 | 583..17 | 2835 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-RA | 664 | CG15536-RA | 26..592 | 583..17 | 2835 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:41:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30424571..30425137 | 17..583 | 2835 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:41:53 has no hits.
BS14466.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:34 Download gff for
BS14466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-PA | 1..567 | 17..583 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:19:03 Download gff for
BS14466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 26..592 | 17..583 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:04:07 Download gff for
BS14466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 26..592 | 17..583 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:04:07 Download gff for
BS14466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30424571..30425137 | 17..583 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:19:03 Download gff for
BS14466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26250293..26250859 | 17..583 | 100 | | Plus |
BS14466.5prime Sequence
597 bp (597 high quality bases) assembled on 2006-10-13
> BS14466.5prime
GAAGTTATCAGTCGACATGCCTGGTGAGGCAAATAACACGCCTCAATCCG
GACGGAGACCCCGACTCGGATTGAGTAGGCGTGGTTGCCAGTCAACGCCC
TTAATAAGACTTCAGAGAGACGATTCCGCTGCAAATACACCAAAATGTAG
TGAACAGGAGACTCCGCGGGCACCGCCTTTATCGCTGAGCTCTCGCAGGA
TAGGATTGTCCAAAAGCAGGACAGGCTTGTCCAAGAAGAAGCTAGAGTTT
GCTGCGGCCCACGGAATTAAGGACGAGGAACGGGAAATAGTGAAGAAAAC
AGCAAAAAAGGATAAAAAGGAAAGGAATGATGCTCAAGAGGCTCTTGATG
CGCCAGAGGAGATACAGGAGCACGGCAACCAGAAGAACCAGCTTGAAAAC
AGTCCACAGAGCAGTAAAATCGTTGAGCTACAGGGCGATATAGAAATCTG
GCGGCAGGGATTCAAAGCTTCTGTGGGTGACCTACTAACTATGGCGGAGC
CAGGACTCTCAAGAAGCGATCTCCTTACTCGGCTGGGCATTCCCCACGAG
ATGCTACGCTATCTGGAGGAGGAGTGTCCATAGAAGCTTTCTAGACC
BS14466.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-PA | 567 | CG15536-RA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:44:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-RA | 664 | CG15536-RA | 26..592 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:44:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30424571..30425137 | 583..17 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:44:09 has no hits.
BS14466.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:34 Download gff for
BS14466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-PA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:41:16 Download gff for
BS14466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 26..592 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:26 Download gff for
BS14466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 26..592 | 17..583 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:26 Download gff for
BS14466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30424571..30425137 | 17..583 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:41:16 Download gff for
BS14466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26250293..26250859 | 17..583 | 100 | | Minus |
BS14466.complete Sequence
599 bp assembled on 2006-11-01
GenBank Submission: FJ637675
> BS14466.complete
GAAGTTATCAGTCGACATGCCTGGTGAGGCAAATAACACGCCTCAATCCG
GACGGAGACCCCGACTCGGATTGAGTAGGCGTGGTTGCCAGTCAACGCCC
TTAATAAGACTTCAGAGAGACGATTCCGCTGCAAATACACCAAAATGTAG
TGAACAGGAGACTCCGCGGGCACCGCCTTTATCGCTGAGCTCTCGCAGGA
TAGGATTGTCCAAAAGCAGGACAGGCTTGTCCAAGAAGAAGCTAGAGTTT
GCTGCGGCCCACGGAATTAAGGACGAGGAACGGGAAATAGTGAAGAAAAC
AGCAAAAAAGGATAAAAAGGAAAGGAATGATGCTCAAGAGGCTCTTGATG
CGCCAGAGGAGATACAGGAGCACGGCAACCAGAAGAACCAGCTTGAAAAC
AGTCCACAGAGCAGTAAAATCGTTGAGCTACAGGGCGATATAGAAATCTG
GCGGCAGGGATTCAAAGCTTCTGTGGGTGACCTACTAACTATGGCGGAGC
CAGGACTCTCAAGAAGCGATCTCCTTACTCGGCTGGGCATTCCCCACGAG
ATGCTACGCTATCTGGAGGAGGAGTGTCCATAGAAGCTTTCTAGACCAT
BS14466.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-RA | 567 | CG15536-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:52:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-RA | 664 | CG15536-RA | 26..592 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30424571..30425137 | 583..17 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:52:38 has no hits.
BS14466.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:19 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:23 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:01:24 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 26..592 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:19 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 1..567 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:15 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15536-RA | 26..592 | 17..583 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:15 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30424571..30425137 | 17..583 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:01:24 Download gff for
BS14466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26250293..26250859 | 17..583 | 100 | | Minus |
BS14466.pep Sequence
Translation from 16 to 582
> BS14466.pep
MPGEANNTPQSGRRPRLGLSRRGCQSTPLIRLQRDDSAANTPKCSEQETP
RAPPLSLSSRRIGLSKSRTGLSKKKLEFAAAHGIKDEEREIVKKTAKKDK
KERNDAQEALDAPEEIQEHGNQKNQLENSPQSSKIVELQGDIEIWRQGFK
ASVGDLLTMAEPGLSRSDLLTRLGIPHEMLRYLEEECP*
BS14466.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15536-PA | 188 | CG15536-PA | 1..188 | 1..188 | 964 | 100 | Plus |