Clone BS14469 Report

Search the DGRC for BS14469

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:144
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG6308-RA
Protein status:BS14469.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14469.3prime Sequence

606 bp (599 high quality bases) assembled on 2006-10-13

> BS14469.3prime
ATGGTCTAGAAAGCTTTTACAGGATTCGCCCAAAATATCGCACATTCTTT
TTATCCAAATAGCGCGTGGCCAACGCCGGCCAGTGGACCACAAAGAGGTC
CGCCAGCGGAAGGAGCAGGCGTCCGCTCAGCGACAGCGTCTCCACGCGGC
AGAAGCTCTCCACGAACACTATTCTGGAGTGCGAGGGCAGGCGTCCGAGG
AGGCGCCACAGATAGGCGGCATAGCAGAAGGGCACACAGGTGCCGGGTCC
ATTGCAGAGGATCAGTTGGGGGCGATCACGCCAGACCAGATAGCAGCTCC
AGAGAAGCGCCCACAGGCTGGTGAAGATGCTGCTTAGCCAGGATTGGCCC
ACGTCGCGGCTGCGCGGCACCTTCACGAATTCCGCCCTCTGGGCAGCCTG
CGGCAGGACCTGCCTGAACTGGCGCTCGGAGGTAGAGTCACTGTTGGCCA
GGATCAGTCTAATTGGCTGGTACTTCTCCGTCTGTTCGATGTCTGTCTGT
TGCAGCAGCGCCTGGGTCAGCCGGCACATCTCCGCCGTGTGGCCGCCAGA
GCCCAGTATTACGTAGGTGGGGTGAGGCGAGCTGGTCGTCATGTCAACTG
ATAACT

BS14469.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-PA 576 CG6308-RA 1..576 592..17 2880 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-RA 696 CG6308-RA 80..655 592..17 2880 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15472243..15472818 592..17 2880 100 Minus
Blast to na_te.dros performed on 2015-02-02 17:57:39 has no hits.

BS14469.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:37 Download gff for BS14469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6308-PA 1..576 17..592 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:40:41 Download gff for BS14469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 80..665 7..592 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:12:35 Download gff for BS14469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 80..665 7..592 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:12:35 Download gff for BS14469.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15472243..15472828 7..592 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:40:41 Download gff for BS14469.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15366276..15366861 7..592 99   Minus

BS14469.5prime Sequence

606 bp (606 high quality bases) assembled on 2006-10-13

> BS14469.5prime
GAAGTTATCAGTCGACATGACGACCAGCTCGCCTCACCCCACCTACGTAA
TACTGGGCTCTGGCGGCCACACGGCGGAGATGTGCCGGCTGACCCAGGCG
CTGCTGCAACAGACAGACATCGAACAGACGGAGAAGTACCAGCCAATTAG
ACTGATCCTGGCCAACAGTGACTCTACCTCCGAGCGCCAGTTCAGGCAGG
TCCTGCCGCAGGCTGCCCAGAGGGCGGAATTCGTGAAGGTGCCGCGCAGC
CGCGACGTGGGCCAATCCTGGCTAAGCAGCATCTTCACCAGCCTGTGGGC
GCTTCTCTGGAGCTGCTATCTGGTCTGGCGTGATCGCCCCCAACTGATCC
TCTGCAATGGACCCGGCACCTGTGTGCCCTTCTGCTATGCCGCCTATCTG
TGGCGCCTCCTCGGACGCCTGCCCTCGCACTCCAGAATAGTGTTCGTGGA
GAGCTTCTGCCGCGTGGAGACGCTGTCGCTGAGCGGACGCCTGCTCCTTC
CGCTGGCGGACCTCTTTGTGGTCCACTGGCCGGCGTTGGCCACGCGCTAT
TTGGATAAAAAGAATGTGCGATATTTTGGGCGAATCCTGTAAAAGCTTTC
TAGACC

BS14469.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-PA 576 CG6308-RA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-RA 696 CG6308-RA 80..655 17..592 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:53:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15472243..15472818 17..592 2880 100 Plus
Blast to na_te.dros performed on 2015-02-12 03:53:20 has no hits.

BS14469.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:37 Download gff for BS14469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6308-PA 1..576 17..592 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:31:28 Download gff for BS14469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 80..665 17..602 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:46:29 Download gff for BS14469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 80..665 17..602 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:46:29 Download gff for BS14469.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15472243..15472828 17..602 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:31:28 Download gff for BS14469.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15366276..15366861 17..602 99   Plus

BS14469.complete Sequence

608 bp assembled on 2006-11-01

> BS14469.complete
GAAGTTATCAGTCGACATGACGACCAGCTCGCCTCACCCCACCTACGTAA
TACTGGGCTCTGGCGGCCACACGGCGGAGATGTGCCGGCTGACCCAGGCG
CTGCTGCAACAGACAGACATCGAACAGACGGAGAAGTACCAGCCAATTAG
ACTGATCCTGGCCAACAGTGACTCTACCTCCGAGCGCCAGTTCAGGCAGG
TCCTGCCGCAGGCTGCCCAGAGGGCGGAATTCGTGAAGGTGCCGCGCAGC
CGCGACGTGGGCCAATCCTGGCTAAGCAGCATCTTCACCAGCCTGTGGGC
GCTTCTCTGGAGCTGCTATCTGGTCTGGCGTGATCGCCCCCAACTGATCC
TCTGCAATGGACCCGGCACCTGTGTGCCCTTCTGCTATGCCGCCTATCTG
TGGCGCCTCCTCGGACGCCTGCCCTCGCACTCCAGAATAGTGTTCGTGGA
GAGCTTCTGCCGCGTGGAGACGCTGTCGCTGAGCGGACGCCTGCTCCTTC
CGCTGGCGGACCTCTTTGTGGTCCACTGGCCGGCGTTGGCCACGCGCTAT
TTGGATAAAAAGAATGTGCGATATTTTGGGCGAATCCTGTAAAAGCTTTC
TAGACCAT

BS14469.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:34:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-RA 576 CG6308-PA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:34:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-RA 696 CG6308-RA 80..655 17..592 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15472243..15472818 17..592 2880 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:34:06 has no hits.

BS14469.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:13 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 1..576 17..592 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:17 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 1..576 17..592 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:08 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 80..653 17..590 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:13 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 1..576 17..592 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:01 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
CG6308-RA 80..653 17..590 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:01 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
X 15472243..15472816 17..590 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:08 Download gff for BS14469.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15366276..15366849 17..590 100   Plus

BS14469.pep Sequence

Translation from 16 to 591

> BS14469.pep
MTTSSPHPTYVILGSGGHTAEMCRLTQALLQQTDIEQTEKYQPIRLILAN
SDSTSERQFRQVLPQAAQRAEFVKVPRSRDVGQSWLSSIFTSLWALLWSC
YLVWRDRPQLILCNGPGTCVPFCYAAYLWRLLGRLPSHSRIVFVESFCRV
ETLSLSGRLLLPLADLFVVHWPALATRYLDKKNVRYFGRIL*

BS14469.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6308-PA 191 CG6308-PA 1..191 1..191 1011 100 Plus