Clone BS14481 Report

Search the DGRC for BS14481

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:144
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG14285-RA
Protein status:BS14481.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14481.3prime Sequence

763 bp (724 high quality bases) assembled on 2006-10-13

> BS14481.3prime
ATGGTCTAGAAAGCTTTTATACGAACTTCGCACTGCGAATGAATCCGTCG
CTGCTTGCTATGTATACCGTGTCGTTGGCTCCACAGCAAATGCTGTTCAC
ACAACTGCCCACCTCCACCTCGCCCAGGGCTTTTGGCTTTCCTGCTTCCA
GATCGGTCCATCCCTTAACCTTTTTGTCATAGCCGCCGGAGTACAAATAG
GTCTCATCTCCGCAAAGGGCGTTTATGATCAACTCATGGCAGTCCGGCAA
GTGCCAAATTTTGGAGTACTGTTGCTGCGAAAGATTGTTGACCAGTTGCA
AACCCATCCCAGAGCGATCGGGAAAGGCCAGATAGCTCCGCTTGCCATCC
ACCATGGGCCCGAGAAGATGGAGCGGAGACTTACCTGGAATCACCGCCTT
GTTGCTGTACTTTCCAGACTTGCCCTCCGCCACCTGAGACACCACCACGT
CCAGGTCGCGAACAGTGTAAATGAGATTCTGCTCGCCGGCCAGTGACTTG
ACCTCCTCCACCAGGCTGTACTTGAAGAGCATGCGATCGTTGGTCCAAGT
GGTCACCACACCCTTGTCATCGCCCGTGTAAAGCACGGATCCGTCGCAGT
ACATGGCCTGGATGGCGTCGTCGCAGCGGAATAGTTCCTGCACTGACTCG
TCTCCATAGGGAGGCAGCATGAAATGAACCTGGCCATCACAGCTGCTCGA
GTAGACCTTTCCGTGCTGATTAATGGCCATGCAGTATATGTACGCCTCGT
GAGCGTTTACAGT

BS14481.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-PA 894 CG14285-RA 148..894 763..17 3710 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-RA 989 CG14285-RA 169..915 763..17 3720 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19025324..19025843 763..244 2585 99.8 Minus
3R 32079331 3R 19025901..19026129 245..17 1145 100 Minus
Blast to na_te.dros performed on 2015-02-12 03:53:37 has no hits.

BS14481.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:44 Download gff for BS14481.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14285-PA 148..894 17..763 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:31:34 Download gff for BS14481.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 153..902 10..763 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:47:06 Download gff for BS14481.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 169..918 10..763 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:47:06 Download gff for BS14481.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 19025324..19025842 245..763 99 -> Minus
3R 19025902..19026132 10..244 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:31:34 Download gff for BS14481.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14851046..14851564 245..763 99 -> Minus
arm_3R 14851624..14851854 10..244 98   Minus

BS14481.5prime Sequence

897 bp (780 high quality bases) assembled on 2006-10-13

> BS14481.5prime
GAAGTTATCAGTCGACATGGCCAACAACGCCCGCATCGAGCACACGTCCT
CCGAGGGTCATGAAGGGGACGCCACATGCGTGGCGTACTTCGATGGACAG
CTGTTCTCCGGAGGCGCTGACGGTAAAATACGAATCTGGTCACCGGAACT
GCAACTATTGGCCACTGTAAACGCTCACGAGGCGTACATATACTGCATGG
CCATTAATCAGCACGGAAAGGTCTACTCGAGCAGCTGTGATGGCCAGGTT
CACTTCATGCTGCCTCCCTATGGAGACGAGTCAGTGCAGGAACTATTCCG
CTGCGACGACGCCATCCAGGCCATGTACTGCGACGGATCCGTGCTTTACA
CGGGCGATGACAAGGGTGTGGTGACCACTTGGACCAACGATCGCATGCTC
TTCAAGTACAGCCTGGTGGAGGAGGTCAAGTCACTGGCCGGCGAGCAGAA
TCTCATTTACACTGTTCGCGACCTGGACGTGGTGGTGTCTCAGGTGGCGG
AGGGCAAGTCTGGAAAGTACAGCAACAAGGCGGTGATTCCAGGTAAGTCT
CCGCTCCATCTTCTCGGGCCCATGGTGGATGGCAAGCGGAGCTATCTGGC
CTTTCCCGATCGCTCTGGGATGGGTTTGCAACTGGTCAACAATCTTTCGC
AGCAACAGTACTCCAAAATTTGGCACTTGCCGGACTGCCATGAGTTGATC
ATAAACGCCCTTTGCGGAGATGAGACCTATTTGTACTCCGGCGGCTATGA
CAAAAAGGTTAAGGGATGGACCGATCTGGAAGCAGGAAAGCCAAAAGCCC
TGAGCGAGGTGGAGGTGGGCAGTTGTGTGAACAGCATTTGCTGTGGAGCC
AACGACACGGTATACATAGCAAGCAGCGACGGATTCTTTCGCAGTGC

BS14481.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-PA 894 CG14285-RA 1..881 17..897 4355 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-RA 989 CG14285-RA 22..902 17..897 4375 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:38:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19025294..19025843 134..683 2750 100 Plus
3R 32079331 3R 19025901..19026116 682..897 1050 99.1 Plus
3R 32079331 3R 19025120..19025236 17..133 585 100 Plus
Blast to na_te.dros performed on 2015-02-03 06:38:56 has no hits.

BS14481.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:45 Download gff for BS14481.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14285-PA 1..881 17..897 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:01 Download gff for BS14481.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..886 15..897 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:20 Download gff for BS14481.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 14..902 7..897 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:20 Download gff for BS14481.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 19025112..19025236 7..133 97 -> Plus
3R 19025294..19025842 134..682 100 -> Plus
3R 19025902..19026116 683..897 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:01 Download gff for BS14481.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14850834..14850958 7..133 97 -> Plus
arm_3R 14851016..14851564 134..682 100 -> Plus
arm_3R 14851624..14851838 683..897 99   Plus

BS14481.complete Sequence

926 bp assembled on 2006-11-01

GenBank Submission: FJ637679

> BS14481.complete
GAAGTTATCAGTCGACATGGCCAACAACGCCCGCATCGAGCACACGTCCT
CCGAGGGTCATGAAGGGGACGCCACATGCGTGGCGTACTTCGATGGACAG
CTGTTCTCCGGAGGCGCTGACGGTAAAATACGAATCTGGTCACCGGAACT
GCAACTATTGGCCACTGTAAACGCTCACGAGGCGTACATATACTGCATGG
CCATTAATCAGCACGGAAAGGTCTACTCGAGCAGCTGTGATGGCCAGGTT
CACTTCATGCTGCCTCCCTATGGAGACGAGTCAGTGCAGGAACTATTCCG
CTGCGACGACGCCATCCAGGCCATGTACTGCGACGGATCCGTGCTTTACA
CGGGCGATGACAAGGGTGTGGTGACCACTTGGACCAACGATCGCATGCTC
TTCAAGTACAGCCTGGTGGAGGAGGTCAAGTCACTGGCCGGCGAGCAGAA
TCTCATTTACACTGTTCGCGACCTGGACGTGGTGGTGTCTCAGGTGGCGG
AGGGCAAGTCTGGAAAGTACAGCAACAAGGCGGTGATTCCAGGTAAGTCT
CCGCTCCATCTTCTCGGGCCCATGGTGGATGGCAAGCGGAGCTATCTGGC
CTTTCCCGATCGCTCTGGGATGGGTTTGCAACTGGTCAACAATCTTTCGC
AGCAACAGTACTCCAAAATTTGGCACTTGCCGGACTGCCATGAGTTGATC
ATAAACGCCCTTTGCGGAGATGAGACCTATTTGTACTCCGGCGGCTATGA
CAAAAAGGTTAAGGGATGGACCGATCTGGAAGCAGGAAAGCCAAAAGCCC
TGGGCGAGGTGGAGGTGGGCAGTTGTGTGAACAGCATTTGCTGTGGAGCC
AACGACACGGTATACATAGCAAGCAGCGACGGATTCATTCGCAGTGCGAA
GTTCGTATAAAAGCTTTCTAGACCAT

BS14481.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-RA 894 CG14285-PA 1..894 17..910 4470 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-RA 989 CG14285-RA 22..915 17..910 4470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19025294..19025843 134..683 2750 100 Plus
3R 32079331 3R 19025901..19026129 682..910 1145 100 Plus
3R 32079331 3R 19025120..19025236 17..133 585 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:05:22 has no hits.

BS14481.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:45 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..894 17..910 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:55 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..902 15..917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:54 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 6..897 17..908 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:45 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 1..902 15..917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:11 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
CG14285-RA 22..913 17..908 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:11 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19025120..19025236 17..133 100 -> Plus
3R 19025294..19025842 134..682 100 -> Plus
3R 19025902..19026127 683..908 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:54 Download gff for BS14481.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14850842..14850958 17..133 100 -> Plus
arm_3R 14851016..14851564 134..682 100 -> Plus
arm_3R 14851624..14851849 683..908 100   Plus

BS14481.pep Sequence

Translation from 16 to 909

> BS14481.pep
MANNARIEHTSSEGHEGDATCVAYFDGQLFSGGADGKIRIWSPELQLLAT
VNAHEAYIYCMAINQHGKVYSSSCDGQVHFMLPPYGDESVQELFRCDDAI
QAMYCDGSVLYTGDDKGVVTTWTNDRMLFKYSLVEEVKSLAGEQNLIYTV
RDLDVVVSQVAEGKSGKYSNKAVIPGKSPLHLLGPMVDGKRSYLAFPDRS
GMGLQLVNNLSQQQYSKIWHLPDCHELIINALCGDETYLYSGGYDKKVKG
WTDLEAGKPKALGEVEVGSCVNSICCGANDTVYIASSDGFIRSAKFV*

BS14481.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14285-PA 297 CG14285-PA 1..297 1..297 1584 100 Plus