Clone Sequence Records
BS14482.3prime Sequence
832 bp (756 high quality bases) assembled on 2006-10-13
> BS14482.3prime
ATGGTCTAGAAAGCTTCTAATTGGCGCTGTCTTCAAGTTTCATTTGTGAC
TTCCGGAACTCATCGGATAGTCTAACCGTCACAGTCAAGGATGATAGAAA
CTCTTCTGGATCATCAAGAAAATTCGAATGCCGTGATTCGAAAACAGCCA
TATTCCGATCCAGTTCCTTGTGCAATTCACTCATTAGATTCACAAGATCC
TTGACCTCGCCATTGAAATCAGCGATTTCGCGCTTTAGACGACTTTTGGA
AAGGCAAGCTGCATTTTGTTTAAGGAATCGTGTGGTGTGAGCGTGGTCTA
GTTTTTTTGCATCCGCTTTGGACATCTTGGCATTGACAAGGTAATTGTAT
CGCTCCTGGCACAACTTCAGTTCCTTGGAAACTTCGCTGGACCAAGCTAC
ATACTTAACGGCTTCAGAATTTAAATCTATAAGATTGCCTTCCATGCAGC
GAATCCTTTCGCGCATTTGGTGGATGATTTCGCGGAGTTTCCTATACCTG
CAGATCAGTTCGTCTATTTGCAATTGAATGCGATTGTGGGCCTGACGAAG
ACTCCTGGCTTCCAGCAATTCATTGCCGCACAAAGGTTGGTTATTCGGAC
AAATGGCTACAGACTTTTCCTTAATCTTAATGTCGATTCCTTGGTTTTTC
CGCTGTTTGCACTTTACTTGAGCACCGGCTTCTATTTCTATTTCAGCAGT
TTCTTCGCTAATTTCTTCGCTGCACTTCTTAACTTGACGCTTCCTAATCG
CTATTTGCATAAGCTCAATCTGTCGAATCANGGAGTCAATATCGTGTGCC
ATTTTCACTGGTCGATCATCAGACTGCTCTGA
BS14482.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-PA | 939 | CG14556-RA | 124..939 | 832..17 | 4036 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:19:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-RB | 1210 | CG14556-RB | 258..1075 | 832..15 | 4064 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:19:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26126916..26127733 | 832..15 | 4064 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-06 10:19:51 has no hits.
BS14482.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:45 Download gff for
BS14482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-PA | 125..939 | 17..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:40:30 Download gff for
BS14482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 259..1078 | 10..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:25:34 Download gff for
BS14482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 259..1078 | 10..831 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:25:34 Download gff for
BS14482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26126917..26127736 | 10..831 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:40:30 Download gff for
BS14482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21952639..21953458 | 10..831 | 99 | | Minus |
BS14482.5prime Sequence
788 bp (773 high quality bases) assembled on 2006-10-13
> BS14482.5prime
GAAGTTATCAGTCGACATGGAACTTGAAAACGTTAAAAGTTTGGGGGAAA
TTGCTAAATGTGCAAAGATGCCATTAAACGAAATGGATCTCATATCCCGA
ACTTCGAAATGTGGAAAAAGTGTTTTAGAAATCTTCGACGTCGATGAGAA
GGTCAGTTTCTCATATGATGGAGGTGAGGAGGAAGAAATGGATATTCTCG
ATCGTTCAGAGCAGTCTGATGATCGACCAGTGAAAATGGCACACGATATT
GACTGCCTGATTCGACAGATTGAGCTTATGCAAATAGCGATTAGGAAGCG
TCAAGTTAAGAAGTGCAGCGAAGAAATTAGCGAAGAAACTGCTGAAATAG
AAATAGAAGCCGGTGCTCAAGTAAAGTGCAAACAGCGGAAAAACCAAGGA
ATCGACATTAAGATTAAGGAAAAGTCTGTAGCCATTTGTCCGAATAACCA
ACCTTTGTGCGGCAATGAATTGCTGGAAGCCAGGAGTCTTCGTCAGGCCC
ACAATCGCATTCAATTGCAAATAGACGAACTGATCTGCAGGTATAGGAAA
CTCCGCGAAATCATCCACCAAATGCGCGAAAGGATTCGCTGCATGGAAGG
CAATCTTATAGATTTAAATTCTGAAGCCGTTAAGTATGTAGCTTGGTCCA
GCGAAGTTTCCAAGGAACTGAAGTTGTGCCAGGAGCGATACAATTACCTT
GTCAATGCCAAGATGTCCAAAGCGGATGCAAAAAAAACTAGACCACGCTC
ACACCACACGATTCCTTAAACAAAATGCAGCTTGCCTT
BS14482.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-PA | 939 | CG14556-RA | 1..654 | 83..736 | 3270 | 100 | Plus |
| CG14556-PA | 939 | CG14556-RA | 648..705 | 731..788 | 290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:56:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-RB | 1210 | CG14556-RB | 68..839 | 16..788 | 3840 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:56:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26126726..26127497 | 16..788 | 3815 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:56:49 has no hits.
BS14482.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:52:45 Download gff for
BS14482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-PA | 1..705 | 83..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:23:13 Download gff for
BS14482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 68..839 | 16..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:33:47 Download gff for
BS14482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 68..839 | 16..788 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:33:47 Download gff for
BS14482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26126726..26127497 | 16..788 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:23:13 Download gff for
BS14482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21952448..21953219 | 16..788 | 99 | | Plus |
BS14482.complete Sequence
1037 bp assembled on 2006-11-01
GenBank Submission: FJ637680
> BS14482.complete
GAAGTTATCAGTCGACATGGAACTTGAAAACGTTAAAAGTTTGGGGGAAA
TTGCTAAATGTGCAAAGATGCCATTAAACGAAATGGATCTCATATCCCGA
ACTTCGAAATGTGGAAAAAGTGTTTTAGAAATCTTCGACGTCGATGAGAA
GGTCAGTTTCTCATATGATGGAGGTGAGGAGGAAGAAATGGATATTCTCG
ATCGTTCAGAGCAGTCTGATGATCGACCAGTGAAAATGGCACACGATATT
GACTGCCTGATTCGACAGATTGAGCTTATGCAAATAGCGATTAGGAAGCG
TCAAGTTAAGAAGTGCAGCGAAGAAATTAGCGAAGAAACTGCTGAAATAG
AAATAGAAGCCGGTGCTCAAGTAAAGTGCAAACAGCGGAAAAACCAAGGA
ATCGACATTAAGATTAAGGAAAAGTCTGTAGCCATTTGTCCGAATAACCA
ACCTTTGTGCGGCAATGAATTGCTGGAAGCCAGGAGTCTTCGTCAGGCCC
ACAATCGCATTCAATTGCAAATAGACGAACTGATCTGCAGGTATAGGAAA
CTCCGCGAAATCATCCACCAAATGCGCGAAAGGATTCGCTGCATGGAAGG
CAATCTTATAGATTTAAATTCTGAAGCCGTTAAGTATGTAGCTTGGTCCA
GCGAAGTTTCCAAGGAACTGAAGTTGTGCCAGGAGCGATACAATTACCTT
GTCAATGCCAAGATGTCCAAAGCGGATGCAAAAAAACTAGACCACGCTCA
CACCACACGATTCCTTAAACAAAATGCAGCTTGCCTTTCCAAAAGTCGTC
TAAAGCGCGAAATCGCTGATTTCAATGGCGAGGTCAAGGATCTTGTGAAT
CTAATGAGTGAATTGCACAAGGAACTGGATCGGAATATGGCTGTTTTCGA
ATCACGGCATTCGAATTTTCTTGATGATCCAGAAGAGTTTCTATCATCCT
TGACTGTGACGGTTAGACTATCCGATGAGTTCCGGAAGTCACAAATGAAA
CTTGAAGACAGCGCCAATTAGAAGCTTTCTAGACCAT
BS14482.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-RB | 1005 | CG14556-PB | 1..1005 | 17..1021 | 5025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-RB | 1210 | CG14556-RB | 68..1075 | 16..1023 | 5040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26126726..26127733 | 16..1023 | 5040 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:08:56 has no hits.
BS14482.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:46 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 1..1005 | 17..1021 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:56 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 39..1049 | 16..1028 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:00:28 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 69..1073 | 17..1021 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:46 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 39..1049 | 16..1028 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:11:56 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14556-RB | 69..1073 | 17..1021 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:11:56 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26126727..26127731 | 17..1021 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:00:28 Download gff for
BS14482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21952449..21953453 | 17..1021 | 100 | | Plus |
BS14482.pep Sequence
Translation from 16 to 1020
> BS14482.pep
MELENVKSLGEIAKCAKMPLNEMDLISRTSKCGKSVLEIFDVDEKVSFSY
DGGEEEEMDILDRSEQSDDRPVKMAHDIDCLIRQIELMQIAIRKRQVKKC
SEEISEETAEIEIEAGAQVKCKQRKNQGIDIKIKEKSVAICPNNQPLCGN
ELLEARSLRQAHNRIQLQIDELICRYRKLREIIHQMRERIRCMEGNLIDL
NSEAVKYVAWSSEVSKELKLCQERYNYLVNAKMSKADAKKLDHAHTTRFL
KQNAACLSKSRLKREIADFNGEVKDLVNLMSELHKELDRNMAVFESRHSN
FLDDPEEFLSSLTVTVRLSDEFRKSQMKLEDSAN*
BS14482.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14556-PB | 334 | CG14556-PB | 1..334 | 1..334 | 1695 | 100 | Plus |
| SIP3-PA | 290 | CG15468-PA | 66..248 | 119..301 | 194 | 25.8 | Plus |
