Clone BS14515 Report

Search the DGRC for BS14515

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:145
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptOr49b-RA
Protein status:BS14515.pep: full length peptide match
Sequenced Size:1160

Clone Sequence Records

BS14515.complete Sequence

1160 bp assembled on 2009-12-07

GenBank Submission: KX800362

> BS14515.complete
GAAGTTATCAGTCGACATGTTTGAAGACATTCAGCTAATCTACATGAATA
TCAAGATATTGCGATTCTGGGCCCTGCTCTATGACAAAAACTTGAGGCGT
TATGTGTGCATTGGACTGGCCTCATTCCACATCTTCACCCAAATCGTCTA
CATGATGAGTACCAATGAAGGACTAACCGGGATAATTCGTAACTCATATA
TGCTCGTCCTTTGGATTAATACGGTGCTGCGAGCTTATCTCTTGCTGGCG
GATCACGACAGATATTTGGCTTTGATCCAAAAACTAACTGAGGCCTATTA
CGATTTACTGAATCTGAACGATTCGTATATATCGGAAATATTGGACCAGG
TGAACAAGGTGGGAAAGTTGATGGCTAGGGGCAATCTGTTCTTTGGCATG
CTCACATCCATGGGATTCGGTCTGTACCCATTGTCCTCCAGCGAAAGAGT
CCTGCCATTTGGCAGCAAAATTCCTGGTCTAAATGAGTACGAGAGTCCGT
ACTATGAGATGTGGTACATCTTTCAGATGCTCATCACCCCGATGGGCTGT
TGCATGTACATTCCGTACACCAGTCTGATTGTGGGCTTGATAATGTTCGG
CATTGTGAGGTGCAAGGCTTTGCAGCATCGCCTCCGCCAGGTGGCGCTTA
AGCATCCGTACGGAGATCGCGATCCCCGTGAACTGAGGGAGGAGATCATA
GCCTGCATACGTTACCAGCAGAGCATTATCGAGTACATGGATCACATAAA
CGAGCTGACCACCATGATGTTCCTATTCGAACTGATGGCCTTTTCGGCGC
TGCTCTGTGCGCTGCTCTTTATGCTGATTATCGTCAGCGGCACCAGTCAG
CTGATAATTGTTTGCATGTACATTAACATGATTCTGGCCCAAATACTGGC
CCTCTATTGGTATGCAAATGAGTTAAGGGAACAGAATCTGGCGGTGGCCA
CCGCAGCCTACGAAACGGAGTGGTTCACCTTCGACGTTCCACTGCGCAAA
AACATCCTGTTCATGATGATGAGGGCACAGCGGCCAGCTGCAATACTACT
GGGCAATATACGCCCCATCACTTTGGAACTGTTCCAAAACCTACTGAACA
CAACCTATACATTTTTTACTGTTCTCAAGCGAGTCTACGGATGAAAGCTT
TCTAGACCAT

BS14515.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Or49b-RA 1128 CG17584-PA 1..1128 17..1144 5625 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
Or49b-RA 1739 CG17584-RA 474..1603 16..1145 5635 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12843138..12843571 16..449 2170 100 Plus
2R 25286936 2R 12843674..12844060 448..834 1935 100 Plus
2R 25286936 2R 12844121..12844330 833..1042 1050 100 Plus
2R 25286936 2R 12844466..12844568 1043..1145 500 99 Plus
Blast to na_te.dros performed on 2014-11-28 01:40:13 has no hits.

BS14515.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:23 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 1..1128 17..1144 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:21 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 481..1601 23..1143 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:54:18 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 481..1601 23..1143 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:37 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 481..1601 23..1143 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:08 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 481..1601 23..1143 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:08 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12843145..12843571 23..449 100 -> Plus
2R 12843676..12844058 450..832 100 -> Plus
2R 12844121..12844330 833..1042 100 -> Plus
2R 12844466..12844566 1043..1143 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:54:18 Download gff for BS14515.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8731971..8732071 1043..1143 99   Plus
arm_2R 8730650..8731076 23..449 100 -> Plus
arm_2R 8731181..8731563 450..832 100 -> Plus
arm_2R 8731626..8731835 833..1042 100 -> Plus

BS14515.3prime Sequence

824 bp (767 high quality bases) assembled on 2006-10-13

> BS14515.3prime
ATGGTCTAGAAAGCTTTCATCCGTAGACTCGCTTGAGAACAGTAAAAAAT
GTATAGGTTGTGTTCAGTAGGTTTTGGAACAGTTCCAAAGTGATGGGGCG
TATATTGCCCAGTAGTATTGCAGCTGGCCGCTGTGCCCTCATCATCATGA
ACAGGATGTTTTTGCGCAGTGGAACGTCGAAGGTGAACCACTCCGTTTCG
TAGGCTGCGGTGGCCACCGCCAGATTCTGTTCCCTTAACTCATTTGCATA
CCAATAGAGGGCCAGTATTTGGGCCAGAATCATGTTAATGTACATGCAAA
CAATTATCAGCTGACTGGTGCCGCTGACGATAATCAGCATAAAGAGCAGC
GCACAGAGCAGCGCCGAAAAGGCCATCAGTTCGAATAGGAACATCATGGT
GGTCAGCTCGTTTATGTGATCCATGTACTCGATAATGCTCTGCTGGTAAC
GTATGCAGGCTATGATCTCCTCCCTCAGTTCACGGGGATCGCGATCTCCG
TACGGATGCTTAAGCGCCACCTGGCGGAGGCGATGCTGCAAAGCCTTGCA
CCTCACAATGCCGAACATTATCAAGCCCACAATCAGACTGGTGTACGGAA
TGTACATGCAACAGCCCATCGGGGTGATGAGCATCTGANAGATGTACCAC
ATCTCATAGTACGGACTCTCGTACTCATTTAGACCAGGAATTTTGCTGCC
AAATGGCAGGACTCTTTCGCTGGAGGACAATGGGTACAGACCGAATCCCA
TGGATGTGAGCATGCCAAAGAACAGATTGCCCCTAGCCATCAACTTTCCC
ACCTTGTTCACCTGGTCCAATATT

BS14515.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17584-PA 1128 Or49b-RA 321..1128 824..17 3996 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:28:22
Subject Length Description Subject Range Query Range Score Percent Strand
Or49b-RA 1739 CG17584-RA 795..1603 824..16 4019 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12843674..12844060 713..327 1924 99.7 Minus
2R 25286936 2R 12844121..12844330 328..119 1050 100 Minus
2R 25286936 2R 12843459..12843571 824..712 565 100 Minus
2R 25286936 2R 12844466..12844568 118..16 500 99 Minus
Blast to na_te.dros performed on 2015-02-13 01:28:18 has no hits.

BS14515.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:02 Download gff for BS14515.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17584-PA 321..1128 17..824 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:11:37 Download gff for BS14515.3prime
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 795..1603 16..824 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:08:04 Download gff for BS14515.3prime
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 795..1603 16..824 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:08:04 Download gff for BS14515.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12843459..12843571 712..824 100 -> Minus
2R 12843676..12844058 329..711 99 -> Minus
2R 12844121..12844330 119..328 100 -> Minus
2R 12844466..12844568 16..118 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:11:37 Download gff for BS14515.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8730964..8731076 712..824 100 -> Minus
arm_2R 8731181..8731563 329..711 99 -> Minus
arm_2R 8731626..8731835 119..328 100 -> Minus
arm_2R 8731971..8732073 16..118 99   Minus

BS14515.5prime Sequence

903 bp (785 high quality bases) assembled on 2006-10-13

> BS14515.5prime
GAAGTTATCAGTCGACATGTTTGAAGACATTCAGCTAATCTACATGAATA
TCAAGATATTGCGATTCTGGGCCCTGCTCTATGACAAAAACTTGAGGCGT
TATGTGTGCATTGGACTGGCCTCATTCCACATCTTCACCCAAATCGTCTA
CATGATGAGTACCAATGAAGGACTAACCGGGATAATTCGTAACTCATATA
TGCTCGTCCTTTGGATTAATACGGTGCTGCGAGCTTATCTCTTGCTGGCG
GATCACGACAGATATTTGGCTTTGATCCAAAAACTAACTGAGGCCTATTA
CGATTTACTGAATCTGAACGATTCGTATATATCGGAAATATTGGACCAGG
TGAACAAGGTGGGAAAGTTGATGGCTAGGGGCAATCTGTTCTTTGGCATG
CTCACATCCATGGGATTCGGTCTGTACCCATTGTCCTCCAGCGAAAGAGT
CCTGCCATTTGGCAGCAAAATTCCTGGTCTAAATGAGTACGAGAGTCCGT
ACTATGAGATGTGGTACATCTTTCAGATGCTCATCACCCCGATGGGCTGT
TGCATGTACATTCCGTACACCAGTCTGATTGTGGGCTTGATAATGTTCGG
CATTGTGAGGTGCAAGGCTTTGCAGCATCGCCTCCGCCAGGTGGCGCTTA
AGCATCCGTACGGAGATCGCGATCCCCGTGAACTGAGGGAGGAGATCATA
GCCTGCATACGTTACCAGCAGAGCATTATCGAGTACATGGATCACATAAA
CGAGCTGACCACCATGATGTTCCTATTCGAACTGATGGCCTTTTCGGCGC
TGCTCTGTGCGCTGCTCTTTATGCTGATTATCGTCAGCGGCACCAGTCAG
CTGATAATTGTTTGCATGTACTTTAACATGATTCTGGCCCAAATACTGGC
CCT

BS14515.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG17584-PA 1128 Or49b-RA 1..887 17..903 4410 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
Or49b-RA 1739 CG17584-RA 474..1361 16..903 4425 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12843138..12843571 16..449 2170 100 Plus
2R 25286936 2R 12843674..12844060 448..834 1935 100 Plus
2R 25286936 2R 12844121..12844191 833..903 340 98.6 Plus
Blast to na_te.dros performed on 2015-02-13 15:48:59 has no hits.

BS14515.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:03 Download gff for BS14515.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17584-PA 1..887 17..903 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:53:11 Download gff for BS14515.5prime
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 463..1361 2..903 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:10:53 Download gff for BS14515.5prime
Subject Subject Range Query Range Percent Splice Strand
Or49b-RA 463..1361 2..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:10:53 Download gff for BS14515.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12843676..12844058 450..832 100 -> Plus
2R 12844121..12844191 833..903 98   Plus
2R 12843127..12843571 2..449 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:53:11 Download gff for BS14515.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8730632..8731076 2..449 99 -> Plus
arm_2R 8731181..8731563 450..832 100 -> Plus
arm_2R 8731626..8731696 833..903 98   Plus

BS14515.pep Sequence

Translation from 16 to 1143

> BS14515.pep
MFEDIQLIYMNIKILRFWALLYDKNLRRYVCIGLASFHIFTQIVYMMSTN
EGLTGIIRNSYMLVLWINTVLRAYLLLADHDRYLALIQKLTEAYYDLLNL
NDSYISEILDQVNKVGKLMARGNLFFGMLTSMGFGLYPLSSSERVLPFGS
KIPGLNEYESPYYEMWYIFQMLITPMGCCMYIPYTSLIVGLIMFGIVRCK
ALQHRLRQVALKHPYGDRDPRELREEIIACIRYQQSIIEYMDHINELTTM
MFLFELMAFSALLCALLFMLIIVSGTSQLIIVCMYINMILAQILALYWYA
NELREQNLAVATAAYETEWFTFDVPLRKNILFMMMRAQRPAAILLGNIRP
ITLELFQNLLNTTYTFFTVLKRVYG*

BS14515.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
Or49b-PA 375 CG17584-PA 1..375 1..375 1939 100 Plus
Or30a-PA 377 CG13106-PA 18..377 12..375 764 42.2 Plus
Or43a-PA 376 CG1854-PA 4..375 3..375 496 30.2 Plus
Or67c-PA 404 CG14156-PA 241..401 213..374 209 26.5 Plus
Or46a-PA 381 CG33478-PA 38..379 12..373 192 23 Plus