Clone Sequence Records
BS14526.3prime Sequence
701 bp (572 high quality bases) assembled on 2006-10-13
> BS14526.3prime
ATGGTCTAGAAAGCTTTTAAAGTGTTGGTAGATTCCCTTGGGAAGGATTT
GTCTCCGTGGGTACATCGGTAGCGACTTTCGCGATTTCGTTATTGATCTT
CTGACTAAGTTCTTTCAGAAGTGTTAGATATTTGTTACGGTAAGTGTTCC
TGACGTTGGCTTCCTGAAACTGATTGGCGGCAGGTGGGGCGCTATCCTTA
CTAGAACGTTTCTTACACGGCTTTGTGGACTTTCGAGTGTTTTGCAGTTG
CCCATTCAATTCCAAAAGTCTGCGGTTCACAGTATTTAGCTCGAGCTCTA
AATCGAGGTTTAACTGTCGTACTTTGATAATATCCGTTTTTCTGGCCTCT
ATTTCTTTCATCAAGTATATGGAATGGTTCCGGAGAAGTAAACTATTGTT
CTGCTCCGTTAGTAACCTCTGTTGCAGGGCCTTGAGCGCACTTTGATTGG
ATCCTTGATTTTTTTCTTTTGCCGGGAAATCATCTAGTCCTTTATTGAAA
GGAATATTATTCAAGTCAATGGAAGAGCTTTTTAGTGATTTGGACCTATT
GATTGGATAATCATCCAGCGGCAAATCAGAAATATCGATATCCATTATAT
AATCGCCCTTTTTCGCATCTTTCAGAGCTACATCATCTTTGGCTATTTTG
GCCTGTGTCTCATCATTCTTGGGAGCAACTTTTTTCAGAGATGCACTTTT
T
BS14526.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-P1 | 795 | Acp26Aa-RA | 112..795 | 700..17 | 3395 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:21:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-RA | 958 | CG8982-RA | 137..820 | 700..17 | 3405 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:21:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5893021..5893704 | 17..700 | 3405 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-06 10:21:53 has no hits.
BS14526.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:11 Download gff for
BS14526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-P1 | 111..795 | 17..701 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:40:52 Download gff for
BS14526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 136..825 | 11..701 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:25:50 Download gff for
BS14526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 136..825 | 11..701 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:25:50 Download gff for
BS14526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5893019..5893704 | 14..701 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:40:52 Download gff for
BS14526.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5893019..5893704 | 14..701 | 99 | | Plus |
BS14526.5prime Sequence
829 bp (759 high quality bases) assembled on 2006-10-13
> BS14526.5prime
GAAGTTATCAGTCGACATGAACCAGATTTTATTATGCTCTCCAATTTTAC
TGCTGCTTTTTACAGTGGCAAGCTGCGATAGTGAGCAACAACTCGATTCA
GCTATGCACCTGAAAAGTGATTCTACGAAAAGTGCATCTCTGAAAAATGT
TGCTCCCAAGAATGATGAGACACAGGCCAAAATAGCCAAAGATGATGTAG
CTCTGAAAGATGCGAAAAAGGGCGATTATATAATGGATATCGATATTTCT
GATTTGCCGCTGGATGATTATCCAATCAATAGGTCCAAATCACTAAAAAG
CTCTTCCATTGACTTGAATAATATTCCTTTCAATAAAGGACTAGATGATT
TCCCGGCAAAAGAAAAAAATCAAGGATCCAATCAAAGTGCGCTCAAGGCC
CTGCAACAGAGGTTACTAACGGAGCAGAACAATAGTTTACTTCTCCGGAA
CCATTCCATATACTTGATGAAAGAAATAGAGGCCAGAAAAACGGATATTA
TCAAAGTACGACAGTTAAACCTCGATTTAGAGCTCGAGCTAAATACTGTG
AACCGCAGACTTTTGGAATTGAATGGGCAACTGCAAAACACTCGAAAGTC
CACAAAGCCGTGTAAGAAACGTTCTAGTAAGGATAGCGCCCCACCTGCCG
CCAATCAGTTTCAGGAAGCCAACGTCAGGAACACTTACCGTAACAAATAT
CTAACACTTCTGAAAGAACTTAGTCAGAAGATCAATAACGAAATCGCGAA
AGTCGCTACCGATGTACCCACGGAGACAAATCCTTCCCCAGGGAATCTAC
CAACACTTTAAAAGCTTTCTAGACCATTC
BS14526.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-P1 | 795 | Acp26Aa-RA | 1..795 | 17..811 | 3950 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-RA | 958 | CG8982-RA | 21..820 | 12..811 | 3970 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5893021..5893786 | 811..46 | 3800 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:40:53 has no hits.
BS14526.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:11 Download gff for
BS14526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-P1 | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:25 Download gff for
BS14526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 8..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:38 Download gff for
BS14526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 8..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:38 Download gff for
BS14526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5893019..5893781 | 51..814 | 99 | <- | Minus |
| 2L | 5893838..5893879 | 8..50 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:25 Download gff for
BS14526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5893019..5893781 | 51..814 | 99 | <- | Minus |
| arm_2L | 5893838..5893879 | 8..50 | 93 | | Minus |
BS14526.complete Sequence
827 bp assembled on 2006-11-01
GenBank Submission: FJ637690
> BS14526.complete
GAAGTTATCAGTCGACATGAACCAGATTTTATTATGCTCTCCAATTTTAC
TGCTGCTTTTTACAGTGGCAAGCTGCGATAGTGAGCAACAACTCGATTCA
GCTATGCACCTGAAAAGTGATTCTACGAAAAGTGCATCTCTGAAAAATGT
TGCTCCCAAGAATGATGAGACACAGGCCAAAATAGCCAAAGATGATGTAG
CTCTGAAAGATGCGAAAAAGGGCGATTATATAATGGATATCGATATTTCT
GATTTGCCGCTGGATGATTATCCAATCAATAGGTCCAAATCACTAAAAAG
CTCTTCCATTGACTTGAATAATATTCCTTTCAATAAAGGACTAGATGATT
TCCCGGCAAAAGAAAAAAATCAAGGATCCAATCAAAGTGCGCTCAAGGCC
CTGCAACAGAGGTTACTAACGGAGCAGAACAATAGTTTACTTCTCCGGAA
CCATTCCATATACTTGATGAAAGAAATAGAGGCCAGAAAAACGGATATTA
TCAAAGTACGACAGTTAAACCTCGATTTAGAGCTCGAGCTAAATACTGTG
AACCGCAGACTTTTGGAATTGAATGGGCAACTGCAAAACACTCGAAAGTC
CACAAAGCCGTGTAAGAAACGTTCTAGTAAGGATAGCGCCCCACCTGCCG
CCAATCAGTTTCAGGAAGCCAACGTCAGGAACACTTACCGTAACAAATAT
CTAACACTTCTGAAAGAACTTAGTCAGAAGATCAATAACGAAATCGCGAA
AGTCGCTACCGATGTACCCACGGAGACAAATCCTTCCCAAGGGAATCTAC
CAACACTTTAAAAGCTTTCTAGACCAT
BS14526.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:20:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-RA | 795 | CG8982-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-RA | 958 | CG8982-RA | 21..820 | 12..811 | 3985 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5893021..5893786 | 811..46 | 3815 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:20:31 has no hits.
BS14526.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:41 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:50 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 8..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:24 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 26..818 | 17..809 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:41 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 8..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:09:10 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 26..818 | 17..809 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:09:10 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5893023..5893781 | 51..809 | 100 | <- | Minus |
| 2L | 5893838..5893871 | 17..50 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:24 Download gff for
BS14526.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5893023..5893781 | 51..809 | 100 | <- | Minus |
| arm_2L | 5893838..5893871 | 17..50 | 100 | | Minus |
BS14526.pep Sequence
Translation from 16 to 810
> BS14526.pep
MNQILLCSPILLLLFTVASCDSEQQLDSAMHLKSDSTKSASLKNVAPKND
ETQAKIAKDDVALKDAKKGDYIMDIDISDLPLDDYPINRSKSLKSSSIDL
NNIPFNKGLDDFPAKEKNQGSNQSALKALQQRLLTEQNNSLLLRNHSIYL
MKEIEARKTDIIKVRQLNLDLELELNTVNRRLLELNGQLQNTRKSTKPCK
KRSSKDSAPPAANQFQEANVRNTYRNKYLTLLKELSQKINNEIAKVATDV
PTETNPSQGNLPTL*
BS14526.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-PA | 264 | CG8982-PA | 1..264 | 1..264 | 1323 | 100 | Plus |
