Clone Sequence Records
BS14528.3prime Sequence
591 bp (591 high quality bases) assembled on 2006-10-13
> BS14528.3prime
ATGGTCTAGAAAGCTTCTACTTCCACACCACAATGGAAATGGTTTCCATT
TCGGGAGCTTCGCATATATACTTAAACAAACTGTTTGGATCCTGTGAGCA
GGGTCTATCGTTTAGCTCAAACTTCCGCGAGTCCTTGTAAATATAGCCAA
GGTGGATGCAGTGCTCCTTCTGCCCAGCATTATCCGGCTGATTCCTTGCC
CACCTGAGCGAACTAATTCGCTGGGCATTGGTGAACCATCTGTGGCTGCC
AGTCTTGGCCAGATCGTTTCCCGATGTCCAGTACGTCAGCCGTGATCCGT
TGGCCGTCAGGAAAGCCGTAACGGCATCGAACTCCTGGTCCGTTTCGAAT
GTGACCAGCTCAGAGTTCAATTCGCGGCATTTCTCGTAGGCCTCGTACCA
GTTCAAGGACTCCGTGCCAAAGAAGTAGTATCCGTCGTTGATTTTGGTAA
AGGGTTCCGCCTTGACGAGCGCACCAAACGTATTTCCTTCGTTTACTTGT
ATGGAGAACTTTTCGCGAGTCCATCCAGTTTTTGCTATGACCAGCAATGT
AATTAGTAGAACCGTAAGCTTCAGCATGTCGACTGATAACT
BS14528.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9976-PA | 561 | Lectin-galC1-RA | 1..561 | 577..17 | 2805 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 702 | CG9976-RB | 14..575 | 577..16 | 2810 | 100 | Minus |
Lectin-galC1-RA | 759 | CG9976-RA | 14..575 | 577..16 | 2810 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:08:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19417618..19418090 | 488..16 | 2365 | 100 | Minus |
2L | 23513712 | 2L | 19417460..19417555 | 577..482 | 465 | 99 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:08:55 has no hits.
BS14528.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:12 Download gff for
BS14528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9976-PA | 1..561 | 17..577 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:11:07 Download gff for
BS14528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..580 | 8..585 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:43:34 Download gff for
BS14528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..580 | 8..585 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:43:34 Download gff for
BS14528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19417453..19417550 | 487..585 | 96 | -> | Minus |
2L | 19417620..19418095 | 8..486 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:11:07 Download gff for
BS14528.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19417453..19417550 | 487..585 | 96 | -> | Minus |
arm_2L | 19417620..19418095 | 8..486 | 99 | | Minus |
BS14528.5prime Sequence
591 bp (591 high quality bases) assembled on 2006-10-13
> BS14528.5prime
GAAGTTATCAGTCGACATGCTGAAGCTTACGGTTCTACTAATTACATTGC
TGGTCATAGCAAAAACTGGATGGACTCGCGAAAAGTTCTCCATACAAGTA
AACGAAGGAAATACGTTTGGTGCGCTCGTCAAGGCGGAACCCTTTACCAA
AATCAACGACGGATACTACTTCTTTGGCACGGAGTCCTTGAACTGGTACG
AGGCCTACGAGAAATGCCGCGAATTGAACTCTGAGCTGGTCACATTCGAA
ACGGACCAGGAGTTCGATGCCGTTACGGCTTTCCTGACGGCCAACGGATC
ACGGCTGACGTACTGGACATCGGGAAACGATCTGGCCAAGACTGGCAGCC
ACAGATGGTTCACCAATGCCCAGCGAATTAGTTCGCTCAGGTGGGCAAGG
AATCAGCCGGATAATGCTGGGCAGAAGGAGCACTGCATCCACCTTGGCTA
TATTTACAAGGACTCGCGGAAGTTTGAGCTAAACGATAGACCCTGCTCAC
AGGATCCAAACAGTTTGTTTAAGTATATATGCGAAGCTCCCGAAATGGAA
ACCATTTCCATTGTGGTGTGGAAGTAGAAGCTTTCTAGACC
BS14528.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9976-PA | 561 | Lectin-galC1-RA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:32:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 702 | CG9976-RB | 14..575 | 17..578 | 2810 | 100 | Plus |
Lectin-galC1-RA | 759 | CG9976-RA | 14..575 | 17..578 | 2810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:32:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19417618..19418090 | 106..578 | 2365 | 100 | Plus |
2L | 23513712 | 2L | 19417460..19417555 | 17..112 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:32:30 has no hits.
BS14528.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:12 Download gff for
BS14528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9976-PA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:22:41 Download gff for
BS14528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..580 | 9..586 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:54 Download gff for
BS14528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..580 | 9..586 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:54 Download gff for
BS14528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19417453..19417550 | 9..107 | 96 | -> | Plus |
2L | 19417620..19418095 | 108..586 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:22:41 Download gff for
BS14528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19417453..19417550 | 9..107 | 96 | -> | Plus |
arm_2L | 19417620..19418095 | 108..586 | 99 | | Plus |
BS14528.complete Sequence
593 bp assembled on 2006-11-01
GenBank Submission: FJ637691
> BS14528.complete
GAAGTTATCAGTCGACATGCTGAAGCTTACGGTTCTACTAATTACATTGC
TGGTCATAGCAAAAACTGGATGGACTCGCGAAAAGTTCTCCATACAAGTA
AACGAAGGAAATACGTTTGGTGCGCTCGTCAAGGCGGAACCCTTTACCAA
AATCAACGACGGATACTACTTCTTTGGCACGGAGTCCTTGAACTGGTACG
AGGCCTACGAGAAATGCCGCGAATTGAACTCTGAGCTGGTCACATTCGAA
ACGGACCAGGAGTTCGATGCCGTTACGGCTTTCCTGACGGCCAACGGATC
ACGGCTGACGTACTGGACATCGGGAAACGATCTGGCCAAGACTGGCAGCC
ACAGATGGTTCACCAATGCCCAGCGAATTAGTTCGCTCAGGTGGGCAAGG
AATCAGCCGGATAATGCTGGGCAGAAGGAGCACTGCATCCACCTTGGCTA
TATTTACAAGGACTCGCGGAAGTTTGAGCTAAACGATAGACCCTGCTCAC
AGGATCCAAACAGTTTGTTTAAGTATATATGCGAAGCTCCCGAAATGGAA
ACCATTTCCATTGTGGTGTGGAAGTAGAAGCTTTCTAGACCAT
BS14528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:57:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 561 | CG9976-PB | 1..561 | 17..577 | 2805 | 100 | Plus |
Lectin-galC1-RA | 561 | CG9976-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-RB | 702 | CG9976-RB | 14..575 | 17..578 | 2810 | 100 | Plus |
Lectin-galC1-RA | 759 | CG9976-RA | 14..575 | 17..578 | 2810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19417618..19418090 | 106..578 | 2365 | 100 | Plus |
2L | 23513712 | 2L | 19417460..19417555 | 17..112 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:57:45 has no hits.
BS14528.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:42 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:51 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..580 | 9..586 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:35:21 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 14..574 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:42 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 7..580 | 9..586 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:48 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lectin-galC1-RA | 14..574 | 17..577 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:48 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19417460..19417550 | 17..107 | 100 | -> | Plus |
2L | 19417620..19418089 | 108..577 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:21 Download gff for
BS14528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19417460..19417550 | 17..107 | 100 | -> | Plus |
arm_2L | 19417620..19418089 | 108..577 | 100 | | Plus |
BS14528.pep Sequence
Translation from 16 to 576
> BS14528.pep
MLKLTVLLITLLVIAKTGWTREKFSIQVNEGNTFGALVKAEPFTKINDGY
YFFGTESLNWYEAYEKCRELNSELVTFETDQEFDAVTAFLTANGSRLTYW
TSGNDLAKTGSHRWFTNAQRISSLRWARNQPDNAGQKEHCIHLGYIYKDS
RKFELNDRPCSQDPNSLFKYICEAPEMETISIVVWK*
BS14528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lectin-galC1-PB | 186 | CG9976-PB | 1..186 | 1..186 | 999 | 100 | Plus |
Lectin-galC1-PA | 186 | CG9976-PA | 1..186 | 1..186 | 999 | 100 | Plus |
lectin-37Da-PB | 186 | CG33532-PB | 1..186 | 1..186 | 592 | 57.5 | Plus |
lectin-37Da-PA | 186 | CG33532-PA | 1..186 | 1..186 | 592 | 57.5 | Plus |
CG43055-PA | 180 | CG43055-PA | 22..180 | 23..185 | 321 | 39.8 | Plus |