Clone BS14532 Report

Search the DGRC for BS14532

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:145
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCyp308a1-RA
Protein status:BS14532.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14532.3prime Sequence

839 bp (748 high quality bases) assembled on 2006-10-13

> BS14532.3prime
ATGGTCTAGAAAGCTTTTAATATCTACGTGTCCTTCTCTTGAAACTCAGC
CAAATGCCATTCCTGCTGGCGGTGAGGAAGGTGAGCGGAGACACCTCCAC
CCTGCACTGATCCTCATCCGCCAGCTGGACGCAGTGGTCCTGCAGTAGTG
TGGTCAGTGCAGCCTTCGTCTGGAGCAGGCCAAGTCGCATTCCCGGACAC
ATTCGTGGTCCAGCTCCGAAGCCCAGAAACCGACAGCCCATTGGTGGCTG
ATTTAGAAAGCGTTCTGGACGAAACTGGTTGGGTGCCGGATACAATGCGG
GATCTAAATGAATGGCCTGAACCGGCAACACCAGCACGGTGCCCAAATGC
ACCTTAAGTTCGCTGCTCGCTCCTGATTTCTGATCAGGAAGGGTGAATGT
CTTGGTGCAGCGCTTCTGCAGAGCCTGCATGGCCGGATGAAGACGCAGTG
CCTCCAAGAGCGCAGCTTCGCTATAGCGAAGTTCACCCAGAGCCACTGGA
TCAATCAGATTGCCAGCGTGGCGCTGGGCCACTTCATCCAATTCGATGTG
TAACCGTCGCTGTGCATCCTCATTGAGGGCCAATTCGTAGAGGGCGAAGG
CGAGTAGCATCGCCGAGGTTTCGTAGCCCTCCAGTAGGAGAGTGGTGGCA
TGTCCAGCTAGCTCCTCCTTTCCCAAGCCTCTTTTGCTTTCCGCCAGCCA
TTGCAAGAGGTTGTCGCCACCACTTCGGGCTTCCACCAATTCCCTGAACC
AGTGCTGCAGGGGCAGGGGTACGTATCGGTGGCCAATGAGTCTACCCAAT
CGAGGCGTGTGCAACAGTGACATGGTCTCCAGCAAACTC

BS14532.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6585-PA 1473 Cyp308a1-RA 651..1473 839..17 4115 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp308a1-RA 1596 CG6585-RA 681..1503 839..17 4115 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18710724..18711195 777..306 2360 100 Minus
X 23542271 X 18711257..18711545 305..17 1445 100 Minus
X 23542271 X 18710605..18710667 839..777 315 100 Minus
Blast to na_te.dros performed on 2015-01-31 10:11:04 has no hits.

BS14532.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:16 Download gff for BS14532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6585-PA 651..1473 17..839 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:34:36 Download gff for BS14532.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 681..1503 17..839 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:44:03 Download gff for BS14532.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 681..1503 17..839 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:44:03 Download gff for BS14532.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18710605..18710667 777..839 100 -> Minus
X 18710725..18711195 306..776 100 -> Minus
X 18711257..18711545 17..305 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:34:36 Download gff for BS14532.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18604638..18604700 777..839 100 -> Minus
arm_X 18604758..18605228 306..776 100 -> Minus
arm_X 18605290..18605578 17..305 100   Minus

BS14532.5prime Sequence

856 bp (759 high quality bases) assembled on 2006-10-13

> BS14532.5prime
GAAGTTATCAGTCGACATGCTGCCACTGGTGCTATTTATCCTATTGGCCG
CCACGCTCCTGTTTTGGAAATGGCAGGGCAATCACTGGCGTCGCCTGGGA
CTGGAGGCACCTTTTGGCTGGCCATTGGTTGGGAATATGTTGGACTTTGC
CCTGGGCCGCCGCTCATATGGAGAGATTTACCAGGAAATCTATACTCGGA
ATCCGGGCCTGAAATATGTGGGTTTCTATCGCCTGTTTAACGAACCCGCC
ATTCTGGTGCGTGACCAGGAGTTGCTGCGCCAGATCCTGGTGGGCCGTAA
CTTTGCCGACTGTGCGGACAACGCCGTTTATGTGGACCACCAGCGCGATG
TCCTGGCTAGCCACAATCCCTTCATCGCCAACGGAGACCGCTGGCGAGTC
TTGCGGGCCGACCTGGTGCCGCTCTTCACACCCAGCCGAGTGCGTCAGAC
CTTGCCGCATGTGGCCAGAGCATGTCAGTTGCTCCGGGATCAGGTGCCCC
TTGGACGCTTCGAGGCCAAGGACTTGGCCACGCGTTATACGCTACAAGTG
GTTGCCTCCGCGATCTTCGGTCTGGATGCACATTGCCTGGGGATTCACAT
GAGGGTGGCTCATGAACCAAGTCGCTGGCTGGAATGGCTCGCTCCGCTCT
TTCAGCCAAGCGTTTGGAGTTTGCTGGAGACCATGTCACTGTTGCACACG
CCTCGATTGGGTAGACTCATTGGCCACCGATACGTACCCCTGCCCCTGCA
GCACTGGTTCAGGGAATTGGTGGAAGCCCGAAGTGGTGGCGACAACCTCT
TGCAATGGCTGGCGGAAAGCAAAGAGGCTTGGGAAAGGANGAGCTAGCTG
GACCTG

BS14532.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6585-PA 1473 Cyp308a1-RA 1..807 17..823 4035 100 Plus
CG6585-PA 1473 Cyp308a1-RA 806..838 821..853 146 96.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp308a1-RA 1596 CG6585-RA 31..868 17..853 4154 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18710134..18710667 196..729 2670 100 Plus
X 23542271 X 18709895..18710073 17..195 895 100 Plus
X 23542271 X 18710724..18710849 729..853 569 98.4 Plus
Blast to na_te.dros performed on 2015-02-08 11:57:02 has no hits.

BS14532.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:16 Download gff for BS14532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6585-PA 1..841 17..856 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:38:22 Download gff for BS14532.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 22..871 8..856 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:43:20 Download gff for BS14532.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 22..871 8..856 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:43:20 Download gff for BS14532.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18709886..18710073 8..195 98 -> Plus
X 18710134..18710667 196..729 100 -> Plus
X 18710725..18710852 730..856 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:38:22 Download gff for BS14532.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18603919..18604106 8..195 98 -> Plus
arm_X 18604167..18604700 196..729 100 -> Plus
arm_X 18604758..18604885 730..856 97   Plus

BS14532.complete Sequence

1505 bp assembled on 2006-11-01

GenBank Submission: FJ637692

> BS14532.complete
GAAGTTATCAGTCGACATGCTGCCACTGGTGCTATTTATCCTATTGGCCG
CCACGCTCCTGTTTTGGAAATGGCAGGGCAATCACTGGCGTCGCCTGGGA
CTGGAGGCACCTTTTGGCTGGCCATTGGTTGGGAATATGTTGGACTTTGC
CCTGGGCCGCCGCTCATATGGAGAGATTTACCAGGAAATCTATACTCGGA
ATCCGGGCCTGAAATATGTGGGTTTCTATCGCCTGTTTAACGAACCCGCC
ATTCTGGTGCGTGACCAGGAGTTGCTGCGCCAGATCCTGGTGGGCCGTAA
CTTTGCCGACTGTGCGGACAACGCCGTTTATGTGGACCACCAGCGCGATG
TCCTGGCTAGCCACAATCCCTTCATCGCCAACGGAGACCGCTGGCGAGTC
TTGCGGGCCGACCTGGTGCCGCTCTTCACACCCAGCCGAGTGCGTCAGAC
CTTGCCGCATGTGGCCAGAGCATGTCAGTTGCTCCGGGATCAGGTGCCCC
TTGGACGCTTCGAGGCCAAGGACTTGGCCACGCGTTATACGCTACAAGTG
GTTGCCTCCGCGATCTTCGGTCTGGATGCACATTGCCTGGGGATTCACAT
GAGGGTGGCTCATGAACCAAGTCGCTGGCTGGAATGGCTCGCTCCGCTCT
TTCAGCCAAGCGTTTGGAGTTTGCTGGAGACCATGTCACTGTTGCACACG
CCTCGATTGGGTAGACTCATTGGCCACCGATACGTACCCCTGCCCCTGCA
GCACTGGTTCAGGGAATTGGTGGAAGCCCGAAGTGGTGGCGACAACCTCT
TGCAATGGCTGGCGGAAAGCAAAAGAGGCTTGGGAAAGGAGGAGCTAGCT
GGACATGCCACCACTCTCCTACTGGAGGGCTACGAAACCTCGGCGATGCT
ACTCGCCTTCGCCCTCTACGAATTGGCCCTCAATGAGGATGCACAGCGAC
GGTTACACATCGAATTGGATGAAGTGGCCCAGCGCCACGCTGGCAATCTG
ATTGATCCAGTGGCTCTGGGTGAACTTCGCTATAGCGAAGCTGCGCTCTT
GGAGGCACTGCGTCTTCATCCGGCCATGCAGGCTCTGCAGAAGCGCTGCA
CCAAGACATTCACCCTTCCTGATCAGAAATCAGGAGCGAGCAGCGAACTT
AAGGTGCATTTGGGCACCGTGCTGGTGTTGCCGGTTCAGGCCATTCATTT
AGATCCCGCATTGTATCCGGCACCCAACCAGTTTCGTCCAGAACGCTTTC
TAAATCAGCCACCAATGGGCTGTCGGTTTCTGGGCTTCGGAGCTGGACCA
CGAATGTGTCCGGGAATGCGACTTGGCCTGCTCCAGACGAAGGCTGCACT
GACCACACTACTGCAGGACCACTGCGTCCAGCTGGCGGATGAGGATCAGT
GCAGGGTGGAGGTGTCTCCGCTCACCTTCCTCACCGCCAGCAGGAATGGC
ATTTGGCTGAGTTTCAAGAGAAGGACACGTAGATATTAAAAGCTTTCTAG
ACCAT

BS14532.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp308a1-RA 1473 CG6585-PA 1..1473 17..1489 7365 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp308a1-RA 1596 CG6585-RA 31..1503 17..1489 7365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18710134..18710667 196..729 2670 100 Plus
X 23542271 X 18710724..18711195 729..1200 2360 100 Plus
X 23542271 X 18711257..18711545 1201..1489 1445 100 Plus
X 23542271 X 18709895..18710073 17..195 895 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:06:39 has no hits.

BS14532.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:19 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 1..1473 17..1489 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:24 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 22..1503 8..1489 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:33:52 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 31..1501 17..1487 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:19 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 22..1503 8..1489 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:03:31 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp308a1-RA 31..1501 17..1487 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:03:31 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
X 18711257..18711543 1201..1487 100   Plus
X 18709895..18710073 17..195 100 -> Plus
X 18710134..18710667 196..729 100 -> Plus
X 18710725..18711195 730..1200 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:33:52 Download gff for BS14532.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18603928..18604106 17..195 100 -> Plus
arm_X 18604167..18604700 196..729 100 -> Plus
arm_X 18604758..18605228 730..1200 100 -> Plus
arm_X 18605290..18605576 1201..1487 100   Plus

BS14532.pep Sequence

Translation from 16 to 1488

> BS14532.pep
MLPLVLFILLAATLLFWKWQGNHWRRLGLEAPFGWPLVGNMLDFALGRRS
YGEIYQEIYTRNPGLKYVGFYRLFNEPAILVRDQELLRQILVGRNFADCA
DNAVYVDHQRDVLASHNPFIANGDRWRVLRADLVPLFTPSRVRQTLPHVA
RACQLLRDQVPLGRFEAKDLATRYTLQVVASAIFGLDAHCLGIHMRVAHE
PSRWLEWLAPLFQPSVWSLLETMSLLHTPRLGRLIGHRYVPLPLQHWFRE
LVEARSGGDNLLQWLAESKRGLGKEELAGHATTLLLEGYETSAMLLAFAL
YELALNEDAQRRLHIELDEVAQRHAGNLIDPVALGELRYSEAALLEALRL
HPAMQALQKRCTKTFTLPDQKSGASSELKVHLGTVLVLPVQAIHLDPALY
PAPNQFRPERFLNQPPMGCRFLGFGAGPRMCPGMRLGLLQTKAALTTLLQ
DHCVQLADEDQCRVEVSPLTFLTASRNGIWLSFKRRTRRY*

BS14532.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp308a1-PA 490 CG6585-PA 1..490 1..490 2581 100 Plus
Cyp28c1-PB 505 CG1895-PB 5..499 2..486 513 32.3 Plus
Cyp28c1-PA 505 CG1895-PA 5..499 2..486 513 32.3 Plus
Cyp6a13-PA 493 CG2397-PA 1..485 1..481 493 29.8 Plus
Cyp28d1-PA 502 CG10833-PA 10..501 5..486 483 27.3 Plus