Clone Sequence Records
BS14546.3prime Sequence
381 bp (381 high quality bases) assembled on 2006-10-13
> BS14546.3prime
ATGGTCTAGAAAGCTTTTATTTGCCAAAGCTGTCGGTGTAGGCGGCGCGT
CTGGCATCAGCACGAGCCTGGCGAACGACCAATGGATCGTCGGCCAAATA
GTGGGGCGCATAGTCTTCCGAGTCGTAGGATCTGCGATTGGTTGCACCGT
ATCCATGTTTGCCGTACACTGCGCTCTTGGGATAGCAGATGAAATAGTCG
CCCTGGTAGTAATCCGCACTGGATCGCTTCTGGCGCACTGGCTCTCCGGT
AATATCCGTGGCCGAAACGAATCCTGGATTCTGGGCATCCTTAGCGATGG
GTGCTGCTTGGATCAGGCTTAAACCGAAGATCATGGAGATCACAACGATG
GATATGATGCACTTCATGTCGACTGATAACT
BS14546.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-PA | 351 | CG13215-RA | 1..351 | 367..17 | 1755 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:05:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-RA | 621 | CG13215-RA | 95..448 | 369..16 | 1770 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11239667..11240020 | 16..369 | 1770 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:05:48 has no hits.
BS14546.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:34 Download gff for
BS14546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-PA | 1..351 | 17..367 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:41:17 Download gff for
BS14546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 85..448 | 16..378 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:13:32 Download gff for
BS14546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 85..448 | 16..378 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:13:32 Download gff for
BS14546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11239667..11240030 | 16..378 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:41:17 Download gff for
BS14546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7127172..7127535 | 16..378 | 98 | | Plus |
BS14546.5prime Sequence
381 bp (381 high quality bases) assembled on 2006-10-13
> BS14546.5prime
GAAGTTATCAGTCGACATGAAGTGCATCATATCCATCGTTGTGATCTCCA
TGATCTTCGGTTTAAGCCTGATCCAAGCAGCACCCATCGCTAAGGATGCC
CAGAATCCAGGATTCGTTTCGGCCACGGATATTACCGGAGAGCCAGTGCG
CCAGAAGCGATCCAGTGCGGATTACTACCAGGGCGACTATTTCATCTGCT
ATCCCAAGAGCGCAGTGTACGGCAAACATGGATACGGTGCAACCAATCGC
AGATCCTACGACTCGGAAGACTATGCGCCCCACTATTTGGCCGACGATCC
ATTGGTCGTTCGCCAGGCTCGTGCTGATGCCAGACGCGCCGCCTACACCG
ACAGCTTTGGCAAATAAAAGCTTTCTAGACC
BS14546.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-PA | 351 | CG13215-RA | 1..351 | 17..367 | 1755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:09:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-RA | 621 | CG13215-RA | 95..448 | 15..368 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11239667..11240020 | 368..15 | 1770 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:09:12 has no hits.
BS14546.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:35 Download gff for
BS14546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-PA | 1..351 | 17..367 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:44:58 Download gff for
BS14546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 85..448 | 6..368 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:26:58 Download gff for
BS14546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 85..448 | 6..368 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:26:58 Download gff for
BS14546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11239667..11240030 | 6..368 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:44:58 Download gff for
BS14546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7127172..7127535 | 6..368 | 98 | | Minus |
BS14546.complete Sequence
383 bp assembled on 2006-11-01
GenBank Submission: FJ637698
> BS14546.complete
GAAGTTATCAGTCGACATGAAGTGCATCATATCCATCGTTGTGATCTCCA
TGATCTTCGGTTTAAGCCTGATCCAAGCAGCACCCATCGCTAAGGATGCC
CAGAATCCAGGATTCGTTTCGGCCACGGATATTACCGGAGAGCCAGTGCG
CCAGAAGCGATCCAGTGCGGATTACTACCAGGGCGACTATTTCATCTGCT
ATCCCAAGAGCGCAGTGTACGGCAAACATGGATACGGTGCAACCAATCGC
AGATCCTACGACTCGGAAGACTATGCGCCCCACTATTTGGCCGACGATCC
ATTGGTCGTTCGCCAGGCTCGTGCTGATGCCAGACGCGCCGCCTACACCG
ACAGCTTTGGCAAATAAAAGCTTTCTAGACCAT
BS14546.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:34:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-RA | 351 | CG13215-PA | 1..351 | 17..367 | 1755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:34:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-RA | 621 | CG13215-RA | 95..448 | 15..368 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:34:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11239667..11240020 | 368..15 | 1770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:34:53 has no hits.
BS14546.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:24 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 1..351 | 17..367 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:31 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 1..351 | 17..367 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:05:00 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 97..445 | 17..365 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:24 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 1..351 | 17..367 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:41 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13215-RA | 97..445 | 17..365 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:41 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11239670..11240018 | 17..365 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:05:00 Download gff for
BS14546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7127175..7127523 | 17..365 | 100 | | Minus |
BS14546.pep Sequence
Translation from 16 to 366
> BS14546.pep
MKCIISIVVISMIFGLSLIQAAPIAKDAQNPGFVSATDITGEPVRQKRSS
ADYYQGDYFICYPKSAVYGKHGYGATNRRSYDSEDYAPHYLADDPLVVRQ
ARADARRAAYTDSFGK*
BS14546.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13215-PA | 116 | CG13215-PA | 1..116 | 1..116 | 605 | 100 | Plus |
