Clone BS14548 Report

Search the DGRC for BS14548

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:145
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG13694-RA
Protein status:BS14548.pep: gold
Sequenced Size:16

Clone Sequence Records

BS14548.5prime Sequence

468 bp (468 high quality bases) assembled on 2006-10-13

> BS14548.5prime
GAAGTTATCAGTCGACATGTTTTACGCATTCATAGCACTTGTTTTGGCCA
TGCTCCACCTGTCATTCGCAGTACAGGTGCAAACGGAGCACACCATTGTG
GAGGAATGGAGCTGGCAAGACCATCACAGCAACAGAGACTTGGGAAGCTA
TAACTACTACACAGCTCTAGATTATGATCAAAATTTCGACGGTGATGAGA
ATTCAAACGATAATGAATATGAAGAGGATGATGGCAGGGCTACTGCCGCC
GGCTTGGACCGGGATGAGGATCCGTGCGAGCGCAGCTGTCCCCGGTACTA
CCGGCCTGTCTGCATTCTCCGCAATGGCCGCAATATGACATTTGCCACGC
TCTGCGAGTTCCACAATCAAGTACGTTGTGCCAACGATCTAAGAAGACAA
GGTCATGGCTATGTGGTCCCCATCTTTCAATACCAACATGATGGTGGCTG
CTAAAAGCTTTCTAGACC

BS14548.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG13694-PA 405 CG13694-RA 1..405 50..454 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:51:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG13694-RB 818 CG13694-RB 33..471 17..455 2195 100 Plus
CG13694-RA 1124 CG13694-RA 339..777 17..455 2195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 115712..116150 455..17 2195 100 Minus
Blast to na_te.dros performed on 2015-01-30 17:51:36 has no hits.

BS14548.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:36 Download gff for BS14548.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13694-PA 1..405 50..454 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:51:10 Download gff for BS14548.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 335..777 9..455 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:05:47 Download gff for BS14548.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 335..777 9..455 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:05:47 Download gff for BS14548.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 115712..116154 9..455 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:51:10 Download gff for BS14548.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 115712..116154 9..455 99   Minus

BS14548.complete Sequence

470 bp assembled on 2006-11-01

GenBank Submission: FJ637699

> BS14548.complete
GAAGTTATCAGTCGACATGTTTTACGCATTCATAGCACTTGTTTTGGCCA
TGCTCCACCTGTCATTCGCAGTACAGGTGCAAACGGAGCACACCATTGTG
GAGGAATGGAGCTGGCAAGACCATCACAGCAACAGAGACTTGGGAAGCTA
TAACTACTACACAGCTCTAGATTATGATCAAAATTTCGACGGTGATGAGA
ATTCAAACGATAATGAATATGAAGAGGATGATGGCAGGGCTACTGCCGCC
GGCTTGGACCGGGATGAGGATCCGTGCGAGCGCAGCTGTCCCCGGTACTA
CCGGCCTGTCTGCATTCTCCGCAATGGCCGCAATATGACATTTGCCACGC
TCTGCGAGTTCCACAATCAAGTACGTTGTGCCAACGATCTAAGAAGACAA
GGTCATGGCTATGTGGTCCCCATCTTTCAATACCAACATGATGGTGGCTG
CTAAAAGCTTTCTAGACCAT

BS14548.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG13694-RB 405 CG13694-PB 1..405 50..454 2025 100 Plus
CG13694-RA 405 CG13694-PA 1..405 50..454 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:36:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13694-RB 818 CG13694-RB 33..471 17..455 2195 100 Plus
CG13694-RA 1124 CG13694-RA 339..777 17..455 2195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 115712..116150 455..17 2195 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:36:43 has no hits.

BS14548.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:25 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 1..405 50..454 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:32 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 1..405 50..454 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:04 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 346..774 24..452 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:25 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 1..405 50..454 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:50 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
CG13694-RA 346..774 24..452 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:50 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
2L 115715..116143 24..452 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:04 Download gff for BS14548.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 115715..116143 24..452 100   Minus

BS14548.pep Sequence

Translation from 16 to 453

> BS14548.pep
MFYAFIALVLAMLHLSFAVQVQTEHTIVEEWSWQDHHSNRDLGSYNYYTA
LDYDQNFDGDENSNDNEYEEDDGRATAAGLDRDEDPCERSCPRYYRPVCI
LRNGRNMTFATLCEFHNQVRCANDLRRQGHGYVVPIFQYQHDGGC*

BS14548.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG13694-PB 134 CG13694-PB 1..134 12..145 760 100 Plus
CG13694-PA 134 CG13694-PA 1..134 12..145 760 100 Plus