Clone Sequence Records
BS14554.5prime Sequence
210 bp (210 high quality bases) assembled on 2006-10-13
> BS14554.5prime
GAAGTTATCAGTCGACATGAAAGCAGCAATAGTACGGATACCAATCGGAA
TTTACTTCAAAACCCTAATGAAGATGAACAGAAATCGTGGGGATCGTTGG
AGAAAGATGGCCGAGCTCGTATTCTCCTTATGTGTGATTGACAAAGCCGA
GGATGTAGTTCTTGATGTTATTATGTTAAAGTTCCTCGGAGAGTAGAAGC
TTTCTAGACC
BS14554.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31230-PA | 180 | CG31230-RA | 1..180 | 17..196 | 900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:06:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31230-RA | 416 | CG31230-RA | 56..237 | 15..196 | 910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18671734..18671915 | 15..196 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:06:15 has no hits.
BS14554.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:41 Download gff for
BS14554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-PA | 1..180 | 17..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:41:19 Download gff for
BS14554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 43..241 | 2..200 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:13:34 Download gff for
BS14554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 43..241 | 2..200 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:13:34 Download gff for
BS14554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18671721..18671919 | 2..200 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:41:19 Download gff for
BS14554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14497443..14497641 | 2..200 | 96 | | Plus |
BS14554.complete Sequence
212 bp assembled on 2006-11-01
GenBank Submission: FJ637701
> BS14554.complete
GAAGTTATCAGTCGACATGAAAGCAGCAATAGTACGGATACCAATCGGAA
TTTACTTCAAAACCCTAATGAAGATGAACAGAAATCGTGGGGATCGTTGG
AGAAAGATGGCCGAGCTCGTATTCTCCTTATGTGTGATTGACAAAGCCGA
GGATGTAGTTCTTGATGTTATTATGTTAAAGTTCCTCGGAGAGTAGAAGC
TTTCTAGACCAT
BS14554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:41:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31230-RA | 180 | CG31230-PA | 1..180 | 17..196 | 900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:41:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31230-RA | 416 | CG31230-RA | 56..237 | 15..196 | 910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:41:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18671734..18671915 | 15..196 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:41:07 has no hits.
BS14554.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:28 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 1..180 | 17..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:25 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 43..241 | 2..200 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:29:31 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 58..237 | 17..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:28 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 43..241 | 2..200 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:15 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31230-RA | 58..237 | 17..196 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:15 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18671736..18671915 | 17..196 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:29:31 Download gff for
BS14554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14497458..14497637 | 17..196 | 100 | | Plus |
BS14554.pep Sequence
Translation from 16 to 195
> BS14554.pep
MKAAIVRIPIGIYFKTLMKMNRNRGDRWRKMAELVFSLCVIDKAEDVVLD
VIMLKFLGE*
BS14554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31230-PA | 59 | CG31230-PA | 1..59 | 1..59 | 298 | 100 | Plus |