Clone Sequence Records
BS14561.3prime Sequence
489 bp (489 high quality bases) assembled on 2006-10-13
> BS14561.3prime
ATGGTCTAGAAAGCTTTTAAAGAGGCGGGTTTTCCCAGTGAAATTGGGAT
GTATACCTGGTACACCTGGTACTTCCAATCCCTGGACTTCGCTTCCGGCT
CGTTGCACCCATCTTCTGCTGCCGCTTCTTCCTATGCGTCTTGGCATTTC
CACGACAGATTCTACGCTTACTTGACTGAACATCAGAGCGCGTCCTTTGC
ACTGTGACCTGCTGAGGCGACAGGACATTGACGGTTAACCTCATTGCCGA
CTCGATGGATGGTCCGAATTGGGCCATCAAATAGGGGACTTCCTCGAACA
AGGACTGCTCCTGGTCACTGAGTGCGTGCCAAGCGTTGCGGGCTTCCTTA
ACCAGTGTGACAGCTGGTATATTCTTACAATCGCAGCCTAGGCGGTATTC
CCGCAGAAAGTTGTACGGGGCACATTTGCTGATGAACACTGGCGACTTGG
AGCCAATGCTATAGCTGTAGTCCATGTCGACTGATAACT
BS14561.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-PA | 459 | CG14835-RA | 1..459 | 475..17 | 2295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:13:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-RA | 659 | CG14835-RA | 135..595 | 475..15 | 2305 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:13:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7436872..7437332 | 15..475 | 2305 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:13:34 has no hits.
BS14561.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:46 Download gff for
BS14561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-PA | 1..459 | 17..475 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:11:49 Download gff for
BS14561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 128..600 | 10..483 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:44:56 Download gff for
BS14561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 128..600 | 10..483 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:44:56 Download gff for
BS14561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7436867..7437339 | 10..483 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:11:49 Download gff for
BS14561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7429967..7430439 | 10..483 | 98 | | Plus |
BS14561.5prime Sequence
489 bp (489 high quality bases) assembled on 2006-10-13
> BS14561.5prime
GAAGTTATCAGTCGACATGGACTACAGCTATAGCATTGGCTCCAAGTCGC
CAGTGTTCATCAGCAAATGTGCCCCGTACAACTTTCTGCGGGAATACCGC
CTAGGCTGCGATTGTAAGAATATACCAGCTGTCACACTGGTTAAGGAAGC
CCGCAACGCTTGGCACGCACTCAGTGACCAGGAGCAGTCCTTGTTCGAGG
AAGTCCCCTATTTGATGGCCCAATTCGGACCATCCATCGAGTCGGCAATG
AGGTTAACCGTCAATGTCCTGTCGCCTCAGCAGGTCACAGTGCAAAGGAC
GCGCTCTGATGTTCAGTCAAGTAAGCGTAGAATCTGTCGTGGAAATGCCA
AGACGCATAGGAAGAAGCGGCAGCAGAAGATGGGTGCAACGAGCCGGAAG
CGAAGTCCAGGGATTGGAAGTACCAGGTGTACCAGGTATACATCCCAATT
TCACTGGGAAAACCCGCCTCTTTAAAAGCTTTCTAGACC
BS14561.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-PA | 459 | CG14835-RA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:51:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-RA | 659 | CG14835-RA | 135..595 | 17..477 | 2305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:50:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7436872..7437332 | 477..17 | 2305 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:50:56 has no hits.
BS14561.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:46 Download gff for
BS14561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-PA | 1..459 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:20:34 Download gff for
BS14561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 128..600 | 9..482 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:05:18 Download gff for
BS14561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 128..600 | 9..482 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:05:18 Download gff for
BS14561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7436867..7437339 | 9..482 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:20:34 Download gff for
BS14561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7429967..7430439 | 9..482 | 98 | | Minus |
BS14561.complete Sequence
491 bp assembled on 2006-11-01
GenBank Submission: FJ637704
> BS14561.complete
GAAGTTATCAGTCGACATGGACTACAGCTATAGCATTGGCTCCAAGTCGC
CAGTGTTCATCAGCAAATGTGCCCCGTACAACTTTCTGCGGGAATACCGC
CTAGGCTGCGATTGTAAGAATATACCAGCTGTCACACTGGTTAAGGAAGC
CCGCAACGCTTGGCACGCACTCAGTGACCAGGAGCAGTCCTTGTTCGAGG
AAGTCCCCTATTTGATGGCCCAATTCGGACCATCCATCGAGTCGGCAATG
AGGTTAACCGTCAATGTCCTGTCGCCTCAGCAGGTCACAGTGCAAAGGAC
GCGCTCTGATGTTCAGTCAAGTAAGCGTAGAATCTGTCGTGGAAATGCCA
AGACGCATAGGAAGAAGCGGCAGCAGAAGATGGGTGCAACGAGCCGGAAG
CGAAGTCCAGGGATTGGAAGTACCAGGTGTACCAGGTATACATCCCAATT
TCACTGGGAAAACCCGCCTCTTTAAAAGCTTTCTAGACCAT
BS14561.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:33:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-RA | 459 | CG14835-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:33:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-RA | 659 | CG14835-RA | 135..595 | 17..477 | 2305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:33:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7436872..7437332 | 477..17 | 2305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:33:17 has no hits.
BS14561.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:51 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 1..459 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:51:29 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 128..600 | 9..482 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:46 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 135..591 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:52 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 128..593 | 9..475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:09 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14835-RA | 135..591 | 17..473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:09 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7436876..7437332 | 17..473 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:46 Download gff for
BS14561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7429976..7430432 | 17..473 | 100 | | Minus |
BS14561.pep Sequence
Translation from 16 to 474
> BS14561.pep
MDYSYSIGSKSPVFISKCAPYNFLREYRLGCDCKNIPAVTLVKEARNAWH
ALSDQEQSLFEEVPYLMAQFGPSIESAMRLTVNVLSPQQVTVQRTRSDVQ
SSKRRICRGNAKTHRKKRQQKMGATSRKRSPGIGSTRCTRYTSQFHWENP
PL*
BS14561.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14835-PA | 152 | CG14835-PA | 1..152 | 1..152 | 803 | 100 | Plus |