Clone Sequence Records
BS14565.3prime Sequence
651 bp (651 high quality bases) assembled on 2006-10-13
> BS14565.3prime
ATGGTCTAGAAAGCTTCTAAGCATGCTCCTGTTTAATACCACCTATCAGG
TAGTCGATGCTAAAGTTACTCTTGGTATTCTCCTCCGGAACTCTCCTTGA
GGATACTAGCGGGTGGTCTTCCTGCTTGACCAGCTGCTTCAGATGATTCA
AATAGACCCTGGCACGCAGACTCTGTTCGGCGATCTTGAGGTGCTCATCG
GAGCACTCCTTGTACTGCTGTTCGATCTGCAGGTCATCGAACTTCTTCTT
CCGTCGACTCATCCTGCAGGCAATTGTGTTCTTGTTGCGGCGCTCCTGAT
CCTTCGGTGAACGCTCCTTCTTCGGGAATTTTCGCACCATATTGACGTGG
TACTTGAAGATGTCTTGGATGGCCTCGGTTATGATGGGGCTGGCGGATTG
GTAGGAAACGCTTGAGGATGAGGATCCCAAACGACGACGCTTTGGCAGTG
GAGGAAAGTCAGCATCCTGATCACTGAAACCCAAGCTGACGGACTGATTT
GCCGCATCGAAAGGACTCCGACTGGTGCAGGGTGTGCCGCTCCGGGAGAT
TAGCTCTTCCTTCAGCTGCAAATCGCATTTCTCAATCTTTCGACCCATGT
CGAACTTTTTGTGGCGATAGATCTGATGGTGCTCCATGTCGACTGATAAC
T
BS14565.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-PA | 621 | CG15479-RA | 1..621 | 637..17 | 3105 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:52:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..687 | 637..16 | 3110 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233974..13234595 | 16..637 | 3110 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:52:21 has no hits.
BS14565.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:49 Download gff for
BS14565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-PA | 1..621 | 17..637 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:51:18 Download gff for
BS14565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..687 | 16..645 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:05:57 Download gff for
BS14565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..687 | 16..645 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:05:57 Download gff for
BS14565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233974..13234601 | 16..645 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:51:18 Download gff for
BS14565.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233974..13234601 | 16..645 | 99 | | Plus |
BS14565.5prime Sequence
651 bp (651 high quality bases) assembled on 2006-10-13
> BS14565.5prime
GAAGTTATCAGTCGACATGGAGCACCATCAGATCTATCGCCACAAAAAGT
TCGACATGGGTCGAAAGATTGAGAAATGCGATTTGCAGCTGAAGGAAGAG
CTAATCTCCCGGAGCGGCACACCCTGCACCAGTCGGAGTCCTTTCGATGC
GGCAAATCAGTCCGTCAGCTTGGGTTTCAGTGATCAGGATGCTGACTTTC
CTCCACTGCCAAAGCGTCGTCGTTTGGGATCCTCATCCTCAAGCGTTTCC
TACCAATCCGCCAGCCCCATCATAACCGAGGCCATCCAAGACATCTTCAA
GTACCACGTCAATATGGTGCGAAAATTCCCGAAGAAGGAGCGTTCACCGA
AGGATCAGGAGCGCCGCAACAAGAACACAATTGCCTGCAGGATGAGTCGA
CGGAAGAAGAAGTTCGATGACCTGCAGATCGAACAGCAGTACAAGGAGTG
CTCCGATGAGCACCTCAAGATCGCCGAACAGAGTCTGCGTGCCAGGGTCT
ATTTGAATCATCTGAAGCAGCTGGTCAAGCAGGAAGACCACCCGCTAGTA
TCCTCAAGGAGAGTTCCGGAGGAGAATACCAAGAGTAACTTTAGCATCGA
CTACCTGATAGGTGGTATTAAACAGGAGCATGCTTAGAAGCTTTCTAGAC
C
BS14565.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-PA | 621 | CG15479-RA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..687 | 17..638 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:41:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233974..13234595 | 638..17 | 3110 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:42:02 has no hits.
BS14565.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:49 Download gff for
BS14565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-PA | 1..621 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:30:41 Download gff for
BS14565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..687 | 9..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:45 Download gff for
BS14565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..687 | 9..638 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:45 Download gff for
BS14565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233974..13234601 | 9..638 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:30:41 Download gff for
BS14565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233974..13234601 | 9..638 | 99 | | Minus |
BS14565.complete Sequence
653 bp assembled on 2006-11-01
GenBank Submission: FJ637706
> BS14565.complete
GAAGTTATCAGTCGACATGGAGCACCATCAGATCTATCGCCACAAAAAGT
TCGACATGGGTCGAAAGATTGAGAAATGCGATTTGCAGCTGAAGGAAGAG
CTAATCTCCCGGAGCGGCACACCCTGCACCAGTCGGAGTCCTTTCGATGC
GGCAAATCAGTCCGTCAGCTTGGGTTTCAGTGATCAGGATGCTGACTTTC
CTCCACTGCCAAAGCGTCGTCGTTTGGGATCCTCATCCTCAAGCGTTTCC
TACCAATCCGCCAGCCCCATCATAACCGAGGCCATCCAAGACATCTTCAA
GTACCACGTCAATATGGTGCGAAAATTCCCGAAGAAGGAGCGTTCACCGA
AGGATCAGGAGCGCCGCAACAAGAACACAATTGCCTGCAGGATGAGTCGA
CGGAAGAAGAAGTTCGATGACCTGCAGATCGAACAGCAGTACAAGGAGTG
CTCCGATGAGCACCTCAAGATCGCCGAACAGAGTCTGCGTGCCAGGGTCT
ATTTGAATCATCTGAAGCAGCTGGTCAAGCAGGAAGACCACCCGCTAGTA
TCCTCAAGGAGAGTTCCGGAGGAGAATACCAAGAGTAACTTTAGCATCGA
CTACCTGATAGGTGGTATTAAACAGGAGCATGCTTAGAAGCTTTCTAGAC
CAT
BS14565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 621 | CG15479-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..687 | 17..638 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233974..13234595 | 638..17 | 3110 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:09:42 has no hits.
BS14565.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:04 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 1..621 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:05 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 33..660 | 9..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:18:59 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 66..686 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:05 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 33..660 | 9..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:14 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 66..686 | 17..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:14 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233975..13234595 | 17..637 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:18:59 Download gff for
BS14565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233975..13234595 | 17..637 | 100 | | Minus |
BS14565.pep Sequence
Translation from 16 to 636
> BS14565.pep
MEHHQIYRHKKFDMGRKIEKCDLQLKEELISRSGTPCTSRSPFDAANQSV
SLGFSDQDADFPPLPKRRRLGSSSSSVSYQSASPIITEAIQDIFKYHVNM
VRKFPKKERSPKDQERRNKNTIACRMSRRKKKFDDLQIEQQYKECSDEHL
KIAEQSLRARVYLNHLKQLVKQEDHPLVSSRRVPEENTKSNFSIDYLIGG
IKQEHA*
BS14565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-PA | 206 | CG15479-PA | 1..206 | 1..206 | 1069 | 100 | Plus |
| CG16815-PB | 192 | CG16815-PB | 1..151 | 1..168 | 175 | 29 | Plus |
