Clone Sequence Records
BS14570.complete Sequence
628 bp assembled on 2010-02-09
GenBank Submission: KX803416
> BS14570.complete
GAAGTTATCAGTCGACATGGGCGCCCAGTTGGCCGGCGAAACGCGTGCCG
AGGGTGGCGGTGCAGGACCAGGAACAGGACCACACCCACCGCAAAAGCAG
GATTCGACGACCAAGAGGTCGGAAAAATCGGACCAGACGGAGAAAGCGTT
GCCGGGGCAGACGAAGCAGGAACCGGATGGACAACCGATTCCCAAACAGG
AGTATCCACAGCCGATGCCCGTTTCCAGACGCCTCATAAGATCGCGCAGC
TTCACCACCGATATCCAACGAATGCCAACGGAGGCCATTTACGCGGAATT
CGATCGACTGATTCAGCAGGTGGAGGGCCATCTGGGGCCGGTGGCGGTGG
AGTCACCGTGCTTGGATGTGGCCGCCCGGCTGCAGAGCTGCCTCCAGGCG
CACCGCCAGCGGTCGTGCAACTGCTTTGCAGCTATGGAGGAGTACCGCAA
CTGCGTGGTGCGTGCCACACAGAATCGCGTGGACGACTTGGCGGACATGG
AGCCGCCAATGATGCCGGTGGTGCCGCCCCAGGTGATGCCACCTCCCGCT
GTGCCGCCGCCAAATGCGCGTGGCAACCGCAGGTGGTGGAAGTTTTGGAC
CTGGTTCCGCTAAAGCTTTCTAGACCAT
BS14570.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-RA | 597 | CG9101-PA | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-RA | 1040 | CG9101-RA | 185..781 | 17..613 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15229003..15229342 | 613..274 | 1700 | 100 | Minus |
| X | 23542271 | X | 15229434..15229691 | 274..17 | 1290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:28:24 has no hits.
BS14570.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:32 Download gff for
BS14570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 185..779 | 17..611 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:01 Download gff for
BS14570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 185..779 | 17..611 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:54:10 Download gff for
BS14570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 185..779 | 17..611 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:39 Download gff for
BS14570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 185..779 | 17..611 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:39 Download gff for
BS14570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15229005..15229342 | 274..611 | 100 | <- | Minus |
| X | 15229435..15229691 | 17..273 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:01 Download gff for
BS14570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15123038..15123375 | 274..611 | 100 | <- | Minus |
| arm_X | 15123468..15123724 | 17..273 | 100 | | Minus |
BS14570.3prime Sequence
626 bp (626 high quality bases) assembled on 2006-10-13
> BS14570.3prime
ATGGTCTAGAAAGCTTTAGCGGAACCAGGTCCAAAACTTCCACCACCTGC
GGTTGCCACGCGCATTTGGCGGCGGCACAGCGGGAGGTGGCATCACCTGG
GGCGGCACCACCGGCATCATTGGCGGCTCCATGTCCGCCAAGTCGTCCAC
GCGATTCTGTGTGGCACGCACCACGCAGTTGCGGTACTCCTCCATAGCTG
CAAAGCAGTTGCACGACCGCTGGCGGTGCGCCTGGAGGCAGCTCTGCAGC
CGGGCGGCCACATCCAAGCACGGTGACTCCACCGCCACCGGCCCCAGATG
GCCCTCCACCTGCTGAATCAGTCGATCGAATTCCGCGTAAATGGCCTCCG
TTGGCATTCGTTGGATATCGGTGGTGAAGCTGCGCGATCTTATGAGGCGT
CTGGAAACGGGCATCGGCTGTGGATACTCCTGTTTGGGAATCGGTTGTCC
ATCCGGTTCCTGCTTCGTCTGCCCCGGCAACGCTTTCTCCGTCTGGTCCG
ATTTTTCCGACCTCTTGGTCGTCGAATCCTGCTTTTGCGGTGGGTGTGGT
CCTGTTCCTGGTCCTGCACCGCCACCCTCGGCACGCGTTTCGCCGGCCAA
CTGGGCGCCCATGTCGACTGATAACT
BS14570.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-PA | 597 | CG9101-RA | 1..597 | 612..16 | 2985 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-RA | 1040 | CG9101-RA | 185..781 | 612..16 | 2985 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:31:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15229003..15229342 | 16..355 | 1700 | 100 | Plus |
| X | 23542271 | X | 15229434..15229691 | 355..612 | 1290 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:31:37 has no hits.
BS14570.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:52 Download gff for
BS14570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-PA | 1..597 | 16..612 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:09:49 Download gff for
BS14570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 177..781 | 16..620 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:15:24 Download gff for
BS14570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 177..781 | 16..620 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:15:24 Download gff for
BS14570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15229003..15229342 | 16..355 | 100 | <- | Plus |
| X | 15229435..15229699 | 356..620 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:09:49 Download gff for
BS14570.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15123036..15123375 | 16..355 | 100 | <- | Plus |
| arm_X | 15123468..15123732 | 356..620 | 98 | | Plus |
BS14570.5prime Sequence
626 bp (626 high quality bases) assembled on 2006-10-13
> BS14570.5prime
GAAGTTATCAGTCGACATGGGCGCCCAGTTGGCCGGCGAAACGCGTGCCG
AGGGTGGCGGTGCAGGACCAGGAACAGGACCACACCCACCGCAAAAGCAG
GATTCGACGACCAAGAGGTCGGAAAAATCGGACCAGACGGAGAAAGCGTT
GCCGGGGCAGACGAAGCAGGAACCGGATGGACAACCGATTCCCAAACAGG
AGTATCCACAGCCGATGCCCGTTTCCAGACGCCTCATAAGATCGCGCAGC
TTCACCACCGATATCCAACGAATGCCAACGGAGGCCATTTACGCGGAATT
CGATCGACTGATTCAGCAGGTGGAGGGCCATCTGGGGCCGGTGGCGGTGG
AGTCACCGTGCTTGGATGTGGCCGCCCGGCTGCAGAGCTGCCTCCAGGCG
CACCGCCAGCGGTCGTGCAACTGCTTTGCAGCTATGGAGGAGTACCGCAA
CTGCGTGGTGCGTGCCACACAGAATCGCGTGGACGACTTGGCGGACATGG
AGCCGCCAATGATGCCGGTGGTGCCGCCCCAGGTGATGCCACCTCCCGCT
GTGCCGCCGCCAAATGCGCGTGGCAACCGCAGGTGGTGGAAGTTTTGGAC
CTGGTTCCGCTAAAGCTTTCTAGACC
BS14570.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:43:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-PA | 597 | CG9101-RA | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-RA | 1040 | CG9101-RA | 185..781 | 17..613 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15229003..15229342 | 613..274 | 1700 | 100 | Minus |
| X | 23542271 | X | 15229434..15229691 | 274..17 | 1290 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:32:15 has no hits.
BS14570.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:53:53 Download gff for
BS14570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-PA | 1..597 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:40:22 Download gff for
BS14570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 177..781 | 9..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:13:53 Download gff for
BS14570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9101-RA | 177..781 | 9..613 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:13:53 Download gff for
BS14570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15229003..15229342 | 274..613 | 100 | <- | Minus |
| X | 15229435..15229699 | 9..273 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:40:22 Download gff for
BS14570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15123036..15123375 | 274..613 | 100 | <- | Minus |
| arm_X | 15123468..15123732 | 9..273 | 98 | | Minus |
BS14570.pep Sequence
Translation from 16 to 612
> BS14570.pep
MGAQLAGETRAEGGGAGPGTGPHPPQKQDSTTKRSEKSDQTEKALPGQTK
QEPDGQPIPKQEYPQPMPVSRRLIRSRSFTTDIQRMPTEAIYAEFDRLIQ
QVEGHLGPVAVESPCLDVAARLQSCLQAHRQRSCNCFAAMEEYRNCVVRA
TQNRVDDLADMEPPMMPVVPPQVMPPPAVPPPNARGNRRWWKFWTWFR*
BS14570.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9101-PA | 198 | CG9101-PA | 1..198 | 1..198 | 1079 | 100 | Plus |
