Clone Sequence Records
BS14585.complete Sequence
797 bp assembled on 2010-02-09
GenBank Submission: KX803966
> BS14585.complete
GAAGTTATCAGTCGACATGCATATCGTGAGTGGCAAGAATCTGAGCCGCG
AAGAGTTAGAGGAAGTTAACAAATGGATGCAACAAAATAGTATTAGCACT
CAAAGATTGCGTCGCGAGTTTTCCGATGTTTTGCCGCTGGCCGAAATATT
CAAACGCGATTATCCGCGCTTGGTGGATCTCTTCAATTATCCGAAGAAGA
GTAGTGTTCAGCTGAAGTTGGCCAATTGGGAGACATTCAACTTTAAAGTG
TTATCCAAGTTAAATATGACGTTGACTAAAGATTTTATGGAGCAAATGGC
GAATGGTGTTAGTGGTGCCGCCGAAGTCATGTTGCATGAAGTGATACGAT
TGGAGAAACGACAACGCCTTGCAGAACAACGAAATGCGGCATTGCGGCAG
GAACAACTTTGGGAGGAAAATGATGAGATAAAAACTGTTGTGGTTAACAA
ACAGATCGGCGATGGCATAGTTCAGGTGCCGCAGAAAATGATCCTATATT
CGCTGTACGAGAAAGTGGAACGTGATAGTCATGCAAAAGATGTTATTATC
GATGCCTATCAACAGCGATTGACCCACATGGAGAGTATTATTAAATTGAA
AACGGAACGGATCGACGAACTTCTAATGCAGATGGGTAAACAACCTCAAA
AGAGAGCTACTAGCAACGCAACCAATTGTTTCTTTGCTTACGATGGAAAG
AACTCCCTAATTCAGAAGCATATAAGTCCTACGCAAGCATCATCGCCTAC
CCATCTGGATGCGGACGGCTTTAACATCTAAAAGCTTTCTAGACCAT
BS14585.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:46:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-RA | 765 | CG12395-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:46:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-RA | 997 | CG12395-RA | 125..889 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:46:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16062010..16062774 | 781..17 | 3825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:46:42 has no hits.
BS14585.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:25 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:15 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 60..822 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:21:12 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 82..844 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:31:23 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 60..822 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:30:35 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 125..887 | 17..779 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:30:35 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16062012..16062774 | 17..779 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:21:12 Download gff for
BS14585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15956045..15956807 | 17..779 | 100 | | Minus |
BS14585.3prime Sequence
795 bp (762 high quality bases) assembled on 2006-10-13
> BS14585.3prime
ATGGTCTAGAAAGCTTTTAGATGTTAAAGCCGTCCGCATCCAGATGGGTA
GGCGATGATGCTTGCGTAGGACTTATATGCTTCTGAATTAGGGAGTTCTT
TCCATCGTAAGCAAAGAAACAATTGGTTGCGTTGCTAGTAGCTCTCTTTT
GAGGTTGTTTACCCATCTGCATTAGAAGTTCGTCGATCCGTTCCGTTTTC
AATTTAATAATACTCTCCATGTGGGTCAATCGCTGTTGATAGGCATCGAT
AATAACATCTTTTGCATGACTATCACGTTCCACTTTCTCGTACAGCGAAT
ATAGGATCATTTTCTGCGGCACCTGAACTATGCCATCGCCGATCTGTTTG
TTAACCACAACAGTTTTTATCTCATCATTTTCCTCCCAAAGTTGTTCCTG
CCGCAATGCCGCATTTCGTTGTTCTGCAAGGCGTTGTCGTTTCTCCAATC
GTATCACTTCATGCAACATGACTTCGGCGGCACCACTAACACCATTCGCC
ATTTGCTCCATAAAATCTTTAGTCAACGTCATATTTAACTTGGATAACAC
TTTAAAGTTGAATGTCTCCCAATTGGCCAACTTCAGCTGAACACTACTCT
TCTTCGGATAATTGAAGAGATCCACCAAGCGCGGATAATCGCGTTTGAAT
ATTTCGGCCAGCGGCAAAACATCGGAAAACTCGCGACGCAATCTTTGAGT
GCTAATACTATTTTGTTGCATCCATTTGTTAACTTCCTCTAACTCTTCGC
GGCTCAGATTCTTGCCACTCACGATATGCATGTCGACTGATAACT
BS14585.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-PA | 765 | CG12395-RA | 1..765 | 781..17 | 3825 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:33:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-RA | 997 | CG12395-RA | 125..889 | 781..17 | 3825 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:33:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16062010..16062774 | 17..781 | 3825 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:33:29 has no hits.
BS14585.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:03 Download gff for
BS14585.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-PA | 1..765 | 17..781 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:40:32 Download gff for
BS14585.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 79..855 | 8..788 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:14:01 Download gff for
BS14585.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 122..898 | 8..788 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:14:01 Download gff for
BS14585.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16062001..16062777 | 8..788 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:40:32 Download gff for
BS14585.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15956034..15956810 | 8..788 | 98 | | Plus |
BS14585.5prime Sequence
795 bp (795 high quality bases) assembled on 2006-10-13
> BS14585.5prime
GAAGTTATCAGTCGACATGCATATCGTGAGTGGCAAGAATCTGAGCCGCG
AAGAGTTAGAGGAAGTTAACAAATGGATGCAACAAAATAGTATTAGCACT
CAAAGATTGCGTCGCGAGTTTTCCGATGTTTTGCCGCTGGCCGAAATATT
CAAACGCGATTATCCGCGCTTGGTGGATCTCTTCAATTATCCGAAGAAGA
GTAGTGTTCAGCTGAAGTTGGCCAATTGGGAGACATTCAACTTTAAAGTG
TTATCCAAGTTAAATATGACGTTGACTAAAGATTTTATGGAGCAAATGGC
GAATGGTGTTAGTGGTGCCGCCGAAGTCATGTTGCATGAAGTGATACGAT
TGGAGAAACGACAACGCCTTGCAGAACAACGAAATGCGGCATTGCGGCAG
GAACAACTTTGGGAGGAAAATGATGAGATAAAAACTGTTGTGGTTAACAA
ACAGATCGGCGATGGCATAGTTCAGGTGCCGCAGAAAATGATCCTATATT
CGCTGTACGAGAAAGTGGAACGTGATAGTCATGCAAAAGATGTTATTATC
GATGCCTATCAACAGCGATTGACCCACATGGAGAGTATTATTAAATTGAA
AACGGAACGGATCGACGAACTTCTAATGCAGATGGGTAAACAACCTCAAA
AGAGAGCTACTAGCAACGCAACCAATTGTTTCTTTGCTTACGATGGAAAG
AACTCCCTAATTCAGAAGCATATAAGTCCTACGCAAGCATCATCGCCTAC
CCATCTGGATGCGGACGGCTTTAACATCTAAAAGCTTTCTAGACC
BS14585.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-PA | 765 | CG12395-RA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-RA | 997 | CG12395-RA | 125..889 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16062010..16062774 | 781..17 | 3825 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:29:54 has no hits.
BS14585.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:03 Download gff for
BS14585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-PA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:11:49 Download gff for
BS14585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 79..855 | 10..790 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:13:17 Download gff for
BS14585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 122..898 | 10..790 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:13:17 Download gff for
BS14585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16062001..16062777 | 10..790 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:11:49 Download gff for
BS14585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15956034..15956810 | 10..790 | 98 | | Minus |
BS14585.pep Sequence
Translation from 16 to 780
> BS14585.pep
MHIVSGKNLSREELEEVNKWMQQNSISTQRLRREFSDVLPLAEIFKRDYP
RLVDLFNYPKKSSVQLKLANWETFNFKVLSKLNMTLTKDFMEQMANGVSG
AAEVMLHEVIRLEKRQRLAEQRNAALRQEQLWEENDEIKTVVVNKQIGDG
IVQVPQKMILYSLYEKVERDSHAKDVIIDAYQQRLTHMESIIKLKTERID
ELLMQMGKQPQKRATSNATNCFFAYDGKNSLIQKHISPTQASSPTHLDAD
GFNI*
BS14585.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-PA | 254 | CG12395-PA | 1..254 | 1..254 | 1292 | 100 | Plus |
| CG16719-PA | 271 | CG16719-PA | 1..233 | 9..208 | 338 | 36.5 | Plus |
