Clone BS14591 Report

Search the DGRC for BS14591

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:145
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG13670-RA
Protein status:BS14591.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14591.3prime Sequence

831 bp (754 high quality bases) assembled on 2006-10-13

> BS14591.3prime
ATGGTCTAGAAAGCTTCTAGTAGTCCTCGTCACTGGACTCCTCCTGCTGA
CTGTGAGCATCTGCCTCGACATATCCTTCCTCGCTGCTGCCCTCGTACTC
CTGGTGACCGCCACCCTCCTCGTCCTCCTCCGCCTGCTCGTCCTTTCCCT
CATCGTAATCCTCGTGCACTTGGTACTGGCCATTCCCCTGGTGCTCCCGC
TCCCGTTCATCCTCCTCCTCATCATCCTCCTTCGCTTTGTGGGCCTCGGC
GCTATGGTGCCTCACCTGGCTGTCCACCGACCCGCCACCCGCATCCCCGT
CGGAACCGTGGCCGTGCAGAGTTTTCACACCATTGGTAATGACCTCGGCT
TGGAAGCCGTTGGCATCGTCGGCCGTGTATTTAACCACACGCAAGGTGCC
ATCCGGATCGACTACGCTGTACACTCCTCTCACCTCGTCCCCGTTGCGCG
TCTCCTTGCGATTCTGCAGCACGCGCGTCTTGCCATCCTCGACTCCATAG
GCGAAGCTGTACTCGGGACGGGCCACATAGTCCACGGTGCGTCCGTCGTG
GACGGTGACCAGATGCTCCGGCCCCACCACCGGACCCTCGAATCTTGCAT
AGGAGTAGCCAACCGCTGCGCATGCACCGATCATTCCGCATCCAGCAATT
AGCGCCAACAGTGGCAACAAATCTTTGAGTTGCCGCACCGCCTGGCCGAA
GCGTGCCTCTCTTCGCAACGCAATGCGGAAGCGCCAGCGAGTTGAAGTCC
GTGCTTTTGGTCCAACGCCAGGTCCATTGGCATCTCCAGCTGTGCTGGTT
ATGCGTCGCTTCTTCATGTCGACTGATAACT

BS14591.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-PA 801 CG13670-RA 1..801 817..17 4005 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-RA 960 CG13670-RA 74..875 817..16 4010 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8321792..8322195 419..16 2020 100 Minus
3L 28110227 3L 8320836..8321236 817..417 2005 100 Minus
Blast to na_te.dros performed on 2015-01-31 10:13:38 has no hits.

BS14591.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:07 Download gff for BS14591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13670-PA 1..801 17..817 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:35:17 Download gff for BS14591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 68..878 10..824 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:44:33 Download gff for BS14591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 68..878 10..824 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:44:33 Download gff for BS14591.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 8320830..8321236 417..824 99 -> Minus
3L 8321795..8322198 10..416 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:35:17 Download gff for BS14591.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8313930..8314336 417..824 99 -> Minus
arm_3L 8314895..8315298 10..416 99   Minus

BS14591.5prime Sequence

831 bp (728 high quality bases) assembled on 2006-10-13

> BS14591.5prime
GAAGTTATCAGTCGACATGAAGAAGCGACGCATAACCAGCACAGCTGGAG
ATGCCAATGGACCTGGCGTTGGACCAAAAGCACGGACTTCAACTCGCTGG
CGCTTCCGCATTGCGTTGCGAAGAGAGGCACGCTTCGGCCAGGCGGTGCG
GCAACTCAAAGATTTGTTGCCACTGTTGGCGCTAATTGCTGGATGCGGAA
TGATCGGTGCATGCGCAGCGGTTGGCTACTCCTATGCAAGATTCGAGGGT
CCGGTGGTGGGGCCGGAGCATCTGGTCACCGTCCACGACGGACGCACCGT
GGACTATGTGGCCCGTCCCGAGTACAGCTTCGCCTATGGAGTCGAGGATG
GCAAGACGCGCGTGCTGCAGAATCGCAAGGAGACGCGCAACGGGGACGAG
GTGAGAGGAGTGTACAGCGTAGTCGATCCGGATGGCACCTTGCGTGTGGT
TAAATACACGGCCGACGATGCCAACGGCTTCCAAGCCGAGGTCATTACCA
ATGGTGTGAAAACTCTGCACGGCCACGGTTCCGACGGGGATGCGGGTGGC
GGGTCGGTGGACAGCCAGGTGAGGCACCATAGCGCCGAGGCCCACAAAGC
GAAGGAGGATGATGAGGAGGAGGATGAACGGGAGCGGGAGCACCAGGGGA
ATGGCCAGTACCAAGTGCACGAGGATTACGATGAGGGAAAGGACGAGCAG
GCGGAGGAGGACGAGGAGGGTGGCGGTCACCAGGAGTACGAGGGCAGCAG
CGAGGAAGGATATGTCGAGGCAGATGCTCACAGTCAGCAGGAGGAGTCCA
GTGACGAGGACTACTAGAAGCTTTCTAGACC

BS14591.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-PA 801 CG13670-RA 1..801 17..817 4005 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-RA 960 CG13670-RA 74..875 17..818 4010 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8321792..8322195 415..818 2020 100 Plus
3L 28110227 3L 8320836..8321236 17..417 2005 100 Plus
Blast to na_te.dros performed on 2015-02-02 18:11:24 has no hits.

BS14591.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:08 Download gff for BS14591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13670-PA 1..801 17..817 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:41:44 Download gff for BS14591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 68..878 10..824 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:14:01 Download gff for BS14591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 68..878 10..824 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:14:01 Download gff for BS14591.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8320830..8321236 10..417 99 -> Plus
3L 8321795..8322198 418..824 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:41:44 Download gff for BS14591.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8313930..8314336 10..417 99 -> Plus
arm_3L 8314895..8315298 418..824 99   Plus

BS14591.complete Sequence

833 bp assembled on 2006-11-01

GenBank Submission: FJ637719

> BS14591.complete
GAAGTTATCAGTCGACATGAAGAAGCGACGCATAACCAGCACAGCTGGAG
ATGCCAATGGACCTGGCGTTGGACCAAAAGCACGGACTTCAACTCGCTGG
CGCTTCCGCATTGCGTTGCGAAGAGAGGCACGCTTCGGCCAGGCGGTGCG
GCAACTCAAAGATTTGTTGCCACTGTTGGCGCTAATTGCTGGATGCGGAA
TGATCGGTGCATGCGCAGCGGTTGGCTACTCCTATGCAAGATTCGAGGGT
CCGGTGGTGGGGCCGGAGCATCTGGTCACCGTCCACGACGGACGCACCGT
GGACTATGTGGCCCGTCCCGAGTACAGCTTCGCCTATGGAGTCGAGGATG
GCAAGACGCGCGTGCTGCAGAATCGCAAGGAGACGCGCAACGGGGACGAG
GTGAGAGGAGTGTACAGCGTAGTCGATCCGGATGGCACCTTGCGTGTGGT
TAAATACACGGCCGACGATGCCAACGGCTTCCAAGCCGAGGTCATTACCA
ATGGTGTGAAAACTCTGCACGGCCACGGTTCCGACGGGGATGCGGGTGGC
GGGTCGGTGGACAGCCAGGTGAGGCACCATAGCGCCGAGGCCCACAAAGC
GAAGGAGGATGATGAGGAGGAGGATGAACGGGAGCGGGAGCACCAGGGGA
ATGGCCAGTACCAAGTGCACGAGGATTACGATGAGGGAAAGGACGAGCAG
GCGGAGGAGGACGAGGAGGGTGGCGGTCACCAGGAGTACGAGGGCAGCAG
CGAGGAAGGATATGTCGAGGCAGATGCTCACAGTCAGCAGGAGGAGTCCA
GTGACGAGGACTACTAGAAGCTTTCTAGACCAT

BS14591.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-RA 801 CG13670-PA 1..801 17..817 4005 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-RA 960 CG13670-RA 74..875 17..818 4010 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8321792..8322195 415..818 2020 100 Plus
3L 28110227 3L 8320836..8321236 17..417 2005 100 Plus
Blast to na_te.dros performed on 2014-11-27 11:09:16 has no hits.

BS14591.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:11 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 1..801 17..817 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:18 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 68..878 10..824 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:45:25 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 74..874 17..817 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:12 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 68..878 10..824 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:39:57 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
CG13670-RA 74..874 17..817 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:39:57 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8321795..8322194 418..817 100   Plus
3L 8320836..8321236 17..417 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:45:25 Download gff for BS14591.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8313936..8314336 17..417 100 -> Plus
arm_3L 8314895..8315294 418..817 100   Plus

BS14591.pep Sequence

Translation from 16 to 816

> BS14591.pep
MKKRRITSTAGDANGPGVGPKARTSTRWRFRIALRREARFGQAVRQLKDL
LPLLALIAGCGMIGACAAVGYSYARFEGPVVGPEHLVTVHDGRTVDYVAR
PEYSFAYGVEDGKTRVLQNRKETRNGDEVRGVYSVVDPDGTLRVVKYTAD
DANGFQAEVITNGVKTLHGHGSDGDAGGGSVDSQVRHHSAEAHKAKEDDE
EEDEREREHQGNGQYQVHEDYDEGKDEQAEEDEEGGGHQEYEGSSEEGYV
EADAHSQQEESSDEDY*

BS14591.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13670-PA 266 CG13670-PA 1..266 1..266 1405 100 Plus
Cpr62Bb-PC 194 CG13935-PC 24..181 92..243 199 31.4 Plus
Cpr62Bb-PB 194 CG13935-PB 24..181 92..243 199 31.4 Plus
Cpr62Bb-PA 194 CG13935-PA 24..181 92..243 199 31.4 Plus
Cpr62Bc-PB 180 CG1919-PB 41..119 90..168 192 46.8 Plus