Clone Sequence Records
BS14592.3prime Sequence
830 bp (815 high quality bases) assembled on 2006-10-13
> BS14592.3prime
ATGGTCTAGAAAGCTTCTAAAACAAATACTGTATATACTCCACGGCCTGC
TCCAGTGCTCTGGGCTCCCCATCGGCATCGAAGTCAATTAGCTCCGGCTG
CCTGTTTCGGGCGATGTATCGCAGGTAGCCACGTGTGCTCTCCATTCGCA
CCGACAACTTAATATCCCAGCCATCGCGACGTGGCGATGTGAAGATGGTG
GAGCCGTGACAGTTGACCATCTGCAGCCAACGGGTGAAGCCCACGCCCAG
GTAGTTATTCGCCTTGTCTACGATCACAATGGGCAGATCCTCGCTGGCCA
GCAGGCGGATCAGCTTGCGCAGCATCCTCTTCTGAATGGGCCAGTAGTAG
CAGGCAGGATCATATAGCATCACCAGCATATCGCTGCTGCTCTCTTCCCG
CAACTCAAAGTAATTCATTGGCTTGGAGTCCAGTGAGGCAGTGGCGCCCA
GGACTACGGCACGGAAGAGTTGATCCGCCAGCAACTGGTCGCAAAACTCC
CTCAGGTATTTGGCGTTGACCAGCTTGTGCATATCGTACACTCGGCCCTC
ACAGTCCTTGCCATAGATTCGCGGTGGCAATCCCTTCCGGTAGCTGCCAA
AGTCGTCGGGATTTAGGTTCGGATTGAACTCCCCGATGTTGGAGATGTCA
CGCAATCCGAACAATATACGACCGGCGTACTCCTGTGCCAACTCATCGAG
CAGACTTATCCACTTGTCCAACGTGTCTCCGTGCCGGTTCTTAACAAAGT
GAAACGCCACCACCTTTGGCCCATCAAATGTGAACCTCCCACCCGGCGAT
TTCCTATCCACTTCCGTTAATGGCGGTAGC
BS14592.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-PA | 870 | CG14695-RA | 57..870 | 830..17 | 4070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:11:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-RA | 1116 | CG14695-RA | 103..917 | 830..16 | 4075 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10878403..10879217 | 16..830 | 4075 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 17:11:04 has no hits.
BS14592.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:08 Download gff for
BS14592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-PA | 57..870 | 17..830 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 17:35:13 Download gff for
BS14592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 103..921 | 11..830 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:06:30 Download gff for
BS14592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 103..921 | 11..830 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:06:30 Download gff for
BS14592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10878399..10879217 | 11..830 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 17:35:13 Download gff for
BS14592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6704121..6704939 | 11..830 | 99 | | Plus |
BS14592.5prime Sequence
803 bp (758 high quality bases) assembled on 2006-10-13
> BS14592.5prime
GAAGTTATCAGTCGACATGGCTCTTGTGAAGACGTACACCATCGACAATA
ACTCCATTCCATGGATTCTGTGGCTACCGCCATTAACGGAAGTGGATAGG
AAATCGCCGGGTGGGAGGTTCACATTTGATGGGCCAAAGGTGGTGGCGTT
TCACTTTGTTAAGAACCGGCACGGAGACACGTTGGACAAGTGGATAAGTC
TGCTCGATGAGTTGGCACAGGAGTACGCCGGTCGTATATTGTTCGGATTG
CGTGACATCTCCAACATCGGGGAGTTCAATCCGAACCTAAATCCCGACGA
CTTTGGCAGCTACCGGAAGGGATTGCCACCGCGAATCTATGGCAAGGACT
GTGAGGGCCGAGTGTACGATATGCACAAGCTGGTCAACGCCAAATACCTG
AGGGAGTTTTGCGACCAGTTGCTGGCGGATCAACTCTTCCGTGCCGTAGT
CCTGGGCGCCACTGCCTCACTGGACTCCAAGCCAATGAATTACTTTGAGT
TGCGGGAAGAGAGCAGCAGCGATATGCTGGTGATGCTATATGATCCTGCC
TGCTACTACTGGCCCATTCAGAAGAGGATGCTGCGCAAGCTGATCCGCCT
GCTGGCCAGCGAGGATCTGCCCATTGTGATCGTAGACAAGGCGAATAACT
ACCTGGGCGTGGGCTTCACCCGTTGGCTGCAGATGGTCAACTGTCACGGC
TCCACCATCTTCACATCGCCACGTCGCGATGGCTGGGATATTAAGTTGTC
GGTGCGAATGGAGAGCACACGTGGCTACCTGCGATACATCGCCCGAAACA
GGC
BS14592.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-PA | 870 | CG14695-RA | 1..787 | 17..803 | 3935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:11:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-RA | 1116 | CG14695-RA | 47..833 | 17..803 | 3935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:11:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10878487..10879273 | 803..17 | 3935 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:11:37 has no hits.
BS14592.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:08 Download gff for
BS14592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-PA | 1..787 | 17..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:45:32 Download gff for
BS14592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 40..833 | 10..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:06 Download gff for
BS14592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 40..833 | 10..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:06 Download gff for
BS14592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10878487..10879278 | 10..803 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:45:32 Download gff for
BS14592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6704209..6705000 | 10..803 | 99 | | Minus |
BS14592.complete Sequence
902 bp assembled on 2006-11-01
GenBank Submission: FJ637720
> BS14592.complete
GAAGTTATCAGTCGACATGGCTCTTGTGAAGACGTACACCATCGACAATA
ACTCCATTCCATGGATTCTGTGGCTACCGCCATTAACGGAAGTGGATAGG
AAATCGCCGGGTGGGAGGTTCACATTTGATGGGCCAAAGGTGGTGGCGTT
TCACTTTGTTAAGAACCGGCACGGAGACACGTTGGACAAGTGGATAAGTC
TGCTCGATGAGTTGGCACAGGAGTACGCCGGTCGTATATTGTTCGGATTG
CGTGACATCTCCAACATCGGGGAGTTCAATCCGAACCTAAATCCCGACGA
CTTTGGCAGCTACCGGAAGGGATTGCCACCGCGAATCTATGGCAAGGACT
GTGAGGGCCGAGTGTACGATATGCACAAGCTGGTCAACGCCAAATACCTG
AGGGAGTTTTGCGACCAGTTGCTGGCGGATCAACTCTTCCGTGCCGTAGT
CCTGGGCGCCACTGCCTCACTGGACTCCAAGCCAATGAATTACTTTGAGT
TGCGGGAAGAGAGCAGCAGCGATATGCTGGTGATGCTATATGATCCTGCC
TGCTACTACTGGCCCATTCAGAAGAGGATGCTGCGCAAGCTGATCCGCCT
GCTGGCCAGCGAGGATCTGCCCATTGTGATCGTAGACAAGGCGAATAACT
ACCTGGGCGTGGGCTTCACCCGTTGGCTGCAGATGGTCAACTGTCACGGC
TCCACCATCTTCACATCGCCACGTCGCGATGGCTGGGATATTAAGTTGTC
GGTGCGAATGGAGAGCACACGTGGCTACCTGCGATACATCGCCCGAAACA
GGCAGCCGGAGCTAATTGACTTCGATGCCGATGGGGAGCCCAGAGCACTG
GAGCAGGCCGTGGAGTATATACAGTATTTGTTTTAGAAGCTTTCTAGACC
AT
BS14592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:10:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-RA | 870 | CG14695-PA | 1..870 | 17..886 | 4350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-RA | 1116 | CG14695-RA | 47..917 | 17..887 | 4355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:10:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10878403..10879273 | 887..17 | 4355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 11:10:24 has no hits.
BS14592.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:13 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 1..870 | 17..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:19 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 1..870 | 17..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:28:28 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 47..916 | 17..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:13 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 1..870 | 17..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:40:26 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14695-RA | 47..916 | 17..886 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:40:26 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10878404..10879273 | 17..886 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:28:28 Download gff for
BS14592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6704126..6704995 | 17..886 | 100 | | Minus |
BS14592.pep Sequence
Translation from 16 to 885
> BS14592.pep
MALVKTYTIDNNSIPWILWLPPLTEVDRKSPGGRFTFDGPKVVAFHFVKN
RHGDTLDKWISLLDELAQEYAGRILFGLRDISNIGEFNPNLNPDDFGSYR
KGLPPRIYGKDCEGRVYDMHKLVNAKYLREFCDQLLADQLFRAVVLGATA
SLDSKPMNYFELREESSSDMLVMLYDPACYYWPIQKRMLRKLIRLLASED
LPIVIVDKANNYLGVGFTRWLQMVNCHGSTIFTSPRRDGWDIKLSVRMES
TRGYLRYIARNRQPELIDFDADGEPRALEQAVEYIQYLF*
BS14592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14695-PA | 289 | CG14695-PA | 1..289 | 1..289 | 1541 | 100 | Plus |
