Clone BS14595 Report

Search the DGRC for BS14595

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:145
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptDic4-RA
Protein status:BS14595.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14595.3prime Sequence

931 bp (726 high quality bases) assembled on 2006-10-13

> BS14595.3prime
ATGGTCTAGAAAGCTTTTAATTGTACTTCTCCCCTCCCAGGGAGCAAATT
CCGAAATGGAGCCTCAGTTGCTCGTACAAAACAAATAGCAAAGTGGTGGC
CGGTGCTTTTCGCACTATAGTTGGCACAAATCCTCGATAGGGTCCCATTA
CGCCAAAGCGCATCATGTGAACAGACGCTTGGAAGACTGTGCGAAATTCG
CCGGGTCTGGAGTTCATCATAATGGTCCTTACCACGTCCAGGGGATGAGT
GATCGCAGACGAAATGATCGATGTACCCAGCGAAGTGAGAAAGTGCAAGG
GCAATCCGTCATTCACAGAGATATTTTTCCTCACTTCCGTTTTAATAATA
TCGTAGAAAGCTATCTGGCTGCAAGTGCTTAGCGATGATTTGAAGACCGC
TACCGATCCACCTTTGTAAAGTGCCTTCCAGCCCTCCTCCTTGGGAATTC
GAATGAGTCCATCGAAGACATGCTTATAGTTGCGTCGCTTGTACGGCGGC
TCCTTCATATCGGTTTGCATCCGCACGTTAATCAGATCCGTTGGTATACC
AAACGCAGAACCGCAAGCTCCAGCCACGCAGCCCAAAATAATCTTTCCCA
GATATGAATCCCTATCGACGTACTCCATTTTCTTGCCAGTATCATACACT
ATGAAATGGATATTGGTGCTGGTCATTTGTCTCAGGATGGCAGCCGAGAA
GCCATCGTAGAAGCCCAAGTATCCTTTTAAAGAGTGTATTCTTTTGACCG
TGCCTAAAATTGAACGCTTTTGCCTTTGGATCTGCATGTGAGTTTTCACG
ATATCAATGGGCGCCACTGCGAAAGCAACGCACATCGAGGCAAAGCCACC
GAACCACCAACGCGGCAAAAGTCCTTCGGGCTCATCATGGCAGTCGCCAA
GGAAGTGGTCATCAAAAACCGGCATGTCGAC

BS14595.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG18363-PA 909 CG18363-RA 1..909 925..17 4520 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 1811 CG18363-RC 142..1050 925..17 4530 99.9 Minus
Dic4-RA 1144 CG18363-RA 142..1050 925..17 4530 99.9 Minus
Dic4-RB 1140 CG18363-RB 142..1046 925..17 4460 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697163..18697492 17..346 1650 100 Plus
3L 28110227 3L 18697760..18698009 476..725 1235 99.6 Plus
3L 28110227 3L 18698069..18698271 723..925 1000 99.5 Plus
3L 28110227 3L 18697567..18697699 347..479 665 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:10:51 has no hits.

BS14595.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:10 Download gff for BS14595.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18363-PA 1..909 17..925 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:02:39 Download gff for BS14595.3prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 137..1057 9..931 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:19:11 Download gff for BS14595.3prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 137..1057 9..931 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:19:11 Download gff for BS14595.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 18698070..18698274 724..931 98   Plus
3L 18697156..18697492 9..346 98 <- Plus
3L 18697567..18697699 347..479 100 <- Plus
3L 18697764..18698007 480..723 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:02:39 Download gff for BS14595.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18690256..18690592 9..346 98 <- Plus
arm_3L 18690667..18690799 347..479 100 <- Plus
arm_3L 18690864..18691107 480..723 100 <- Plus
arm_3L 18691170..18691374 724..931 98   Plus

BS14595.5prime Sequence

837 bp (824 high quality bases) assembled on 2006-10-13

> BS14595.5prime
GAAGTTATCAGTCGACATGCCGGTTTTTGATGACCACTTCCTTGGCGACT
GCCATGATGAGCCCGAAGGACTTTTGCCGCGTTGGTGGTTCGGTGGCTTT
GCCTCGATGTGCGTTGCCTTCGCAGTGGCGCCCATTGATATCGTGAAAAC
TCACATGCAGATCCAAAGGCAAAAGCGTTCAATTTTAGGCACGGTCAAAA
GAATACACTCTTTAAAAGGATACTTGGGCTTCTACGATGGCTTCTCGGCT
GCCATCCTGAGACAAATGACCAGCACCAATATCCATTTCATAGTGTATGA
TACTGGCAAGAAAATGGAGTACGTCGATAGGGATTCATATCTGGGAAAGA
TTATTTTGGGCTGCGTGGCTGGAGCTTGCGGTTCTGCGTTTGGTATACCA
ACGGATCTGATTAACGTGCGGATGCAAACCGATATGAAGGAGCCGCCGTA
CAAGCGACGCAACTATAAGCATGTCTTCGATGGACTCATTCGAATTCCCA
AGGAGGAGGGCTGGAAGGCACTTTACAAAGGTGGATCGGTAGCGGTCTTC
AAATCATCGCTAAGCACTTGCAGCCAGATAGCTTTCTACGATATTATTAA
AACGGAAGTGAGGAAAAATATCTCTGTGAATGACGGATTGCCCTTGCACT
TTCTCACTTCGCTGGGTACATCGATCATTTCGTCTGCGATCACTCATCCC
CTGGACGTGGTAAGGACCATTATGATGAACTCCAGACCCGGCGAATTTCG
CACAGTCTTCCAAGCGTCTGTTCACATGATGCGCTTTGGCGTAATGGGAC
CCTATCGAGGATTTGTGCCAACTATAGTGCGAAAAGC

BS14595.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG18363-PA 909 CG18363-RA 1..821 17..837 4105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 1811 CG18363-RC 142..962 17..837 4105 100 Plus
Dic4-RA 1144 CG18363-RA 142..962 17..837 4105 100 Plus
Dic4-RB 1140 CG18363-RB 142..958 17..837 4035 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697760..18698009 466..217 1235 99.6 Minus
3L 28110227 3L 18697251..18697492 837..596 1210 100 Minus
3L 28110227 3L 18698069..18698271 219..17 1015 100 Minus
3L 28110227 3L 18697567..18697699 595..463 665 100 Minus
Blast to na_te.dros performed on 2015-02-10 16:22:46 has no hits.

BS14595.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:11 Download gff for BS14595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18363-PA 1..821 17..837 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:13:18 Download gff for BS14595.5prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 138..962 10..837 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:25 Download gff for BS14595.5prime
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 138..962 10..837 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:25 Download gff for BS14595.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18697251..18697492 596..837 100 <- Minus
3L 18697567..18697699 463..595 100 <- Minus
3L 18697764..18698007 219..462 100 <- Minus
3L 18698070..18698275 10..218 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:13:18 Download gff for BS14595.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18690351..18690592 596..837 100 <- Minus
arm_3L 18690667..18690799 463..595 100 <- Minus
arm_3L 18690864..18691107 219..462 100 <- Minus
arm_3L 18691170..18691375 10..218 98   Minus

BS14595.complete Sequence

941 bp assembled on 2006-11-01

GenBank Submission: FJ637721

> BS14595.complete
GAAGTTATCAGTCGACATGCCGGTTTTTGATGACCACTTCCTTGGCGACT
GCCATGATGAGCCCGAAGGACTTTTGCCGCGTTGGTGGTTCGGTGGCTTT
GCCTCGATGTGCGTTGCCTTCGCAGTGGCGCCCATTGATATCGTGAAAAC
TCACATGCAGATCCAAAGGCAAAAGCGTTCAATTTTAGGCACGGTCAAAA
GAATACACTCTTTAAAAGGATACTTGGGCTTCTACGATGGCTTCTCGGCT
GCCATCCTGAGACAAATGACCAGCACCAATATCCATTTCATAGTGTATGA
TACTGGCAAGAAAATGGAGTACGTCGATAGGGATTCATATCTGGGAAAGA
TTATTTTGGGCTGCGTGGCTGGAGCTTGCGGTTCTGCGTTTGGTATACCA
ACGGATCTGATTAACGTGCGGATGCAAACCGATATGAAGGAGCCGCCGTA
CAAGCGACGCAACTATAAGCATGTCTTCGATGGACTCATTCGAATTCCCA
AGGAGGAGGGCTGGAAGGCACTTTACAAAGGTGGATCGGTAGCGGTCTTC
AAATCATCGCTAAGCACTTGCAGCCAGATAGCTTTCTACGATATTATTAA
AACGGAAGTGAGGAAAAATATCTCTGTGAATGACGGATTGCCCTTGCACT
TTCTCACTTCGCTGGGTACATCGATCATTTCGTCTGCGATCACTCATCCC
CTGGACGTGGTAAGGACCATTATGATGAACTCCAGACCCGGCGAATTTCG
CACAGTCTTCCAAGCGTCTGTTCACATGATGCGCTTTGGCGTAATGGGAC
CCTATCGAGGATTTGTGCCAACTATAGTGCGAAAAGCACCGGCCACCACT
TTGCTATTTGTTTTGTACGAGCAACTGAGGCTCCATTTCGGAATTTGCTC
CCTGGGAGGGGAGAAGTACAATTAAAAGCTTTCTAGACCAT

BS14595.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 909 CG18363-PC 1..909 17..925 4545 100 Plus
Dic4-RA 909 CG18363-PA 1..909 17..925 4545 100 Plus
Dic4-RB 522 CG18363-PB 1..522 17..542 2535 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-RC 1811 CG18363-RC 142..1050 17..925 4545 100 Plus
Dic4-RA 1144 CG18363-RA 142..1050 17..925 4545 100 Plus
Dic4-RB 1140 CG18363-RB 142..1046 17..925 4450 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697163..18697492 925..596 1650 100 Minus
3L 28110227 3L 18697760..18698009 466..217 1235 99.6 Minus
3L 28110227 3L 18698069..18698271 219..17 1015 100 Minus
3L 28110227 3L 18697567..18697699 595..463 665 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:44:16 has no hits.

BS14595.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:36:16 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..909 17..925 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:09:21 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 138..1057 10..933 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:31 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 142..1048 17..923 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:36:16 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 138..1057 10..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:48 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 142..1048 17..923 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:48 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18697165..18697492 596..923 100 <- Minus
3L 18697567..18697699 463..595 100 <- Minus
3L 18697764..18698007 219..462 100 <- Minus
3L 18698070..18698271 17..218 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:31 Download gff for BS14595.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18690265..18690592 596..923 100 <- Minus
arm_3L 18690667..18690799 463..595 100 <- Minus
arm_3L 18690864..18691107 219..462 100 <- Minus
arm_3L 18691170..18691371 17..218 100   Minus

BS14595.pep Sequence

Translation from 16 to 924

> BS14595.pep
MPVFDDHFLGDCHDEPEGLLPRWWFGGFASMCVAFAVAPIDIVKTHMQIQ
RQKRSILGTVKRIHSLKGYLGFYDGFSAAILRQMTSTNIHFIVYDTGKKM
EYVDRDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKEPPYKRRNY
KHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRK
NISVNDGLPLHFLTSLGTSIISSAITHPLDVVRTIMMNSRPGEFRTVFQA
SVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHFGICSLGGEK
YN*

BS14595.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-PC 302 CG18363-PC 1..302 1..302 1596 100 Plus
Dic4-PA 302 CG18363-PA 1..302 1..302 1596 100 Plus
Dic4-PB 173 CG18363-PB 1..147 1..147 793 100 Plus
Dic3-PA 287 CG11196-PA 9..281 20..292 588 42.9 Plus
Dic1-PC 280 CG8790-PC 10..277 23..292 576 41.9 Plus