Clone Sequence Records
BS14607.3prime Sequence
519 bp (519 high quality bases) assembled on 2006-10-13
> BS14607.3prime
ATGGTCTAGAAAGCTTTTAATGAGACAAAAAGCTCGGACTGTAGATCCTG
CGCACGTGGAAGTGGCGAGCCCGTCGCCGGCAGATTGGGCAGCGATGATT
GCGCCGAATGGCCATGTGGATGCAGCTGGAGCCAAACAAATGGCCACAAC
GGAGCGAGACCAGGCGATGTATTCCGTTGTCCGTCCAGGGCAACAGGCAA
ATGGAGCAAGTTGAATTCTCCACCATTCTGTCCAGACGCTGATTGAGTGT
CTTCACACCCGAATGGAGCTCTGCGATGAGAACGAGTTCGCCAATCCTGT
GCAAACGTTCCTCCAGGGTGGCATACTGCAGCATCTTTCCCTGCAACAGG
CGTAGGATGCGACGACGCTGAGTATTCAGATGCTTCACCCGCAAATTGTG
ATCCCTGAGCTTGCGGACTTGCTCCTCCAGATTGCCATTGGACGGCTCCG
TCGGCTCCTGCTGCTGCTGCTCCGTGCGCTCAAGTTCCTTCTCGATTTTC
TCCATGTCGACTGATAACT
BS14607.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-PA | 489 | CG17329-RA | 1..489 | 505..17 | 2445 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-RA | 665 | CG17329-RA | 59..547 | 505..17 | 2445 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16291342..16291830 | 505..17 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:11:04 has no hits.
BS14607.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:16 Download gff for
BS14607.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-PA | 1..489 | 17..505 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:02:46 Download gff for
BS14607.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..547 | 17..517 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:19:51 Download gff for
BS14607.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..547 | 17..517 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:19:51 Download gff for
BS14607.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16291330..16291830 | 17..517 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:02:46 Download gff for
BS14607.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16291330..16291830 | 17..517 | 99 | | Minus |
BS14607.5prime Sequence
519 bp (519 high quality bases) assembled on 2006-10-13
> BS14607.5prime
GAAGTTATCAGTCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGG
AGCAGCAGCAGCAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAG
CAAGTCCGCAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATAC
TCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATG
CCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCA
GAGCTCCATTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGT
GGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAA
TACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGC
ATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACG
GGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTC
ATTAAAAGCTTTCTAGACC
BS14607.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-PA | 489 | CG17329-RA | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:44:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-RA | 665 | CG17329-RA | 59..547 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:44:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16291342..16291830 | 17..505 | 2445 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:44:10 has no hits.
BS14607.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:17 Download gff for
BS14607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-PA | 1..489 | 17..505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:31:12 Download gff for
BS14607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..547 | 5..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:39:02 Download gff for
BS14607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..547 | 5..505 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:39:02 Download gff for
BS14607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16291330..16291830 | 5..505 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:31:12 Download gff for
BS14607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16291330..16291830 | 5..505 | 99 | | Plus |
BS14607.complete Sequence
521 bp assembled on 2006-11-01
GenBank Submission: FJ637725
> BS14607.complete
GAAGTTATCAGTCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGG
AGCAGCAGCAGCAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAG
CAAGTCCGCAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATAC
TCAGCGTCGTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATG
CCACCCTGGAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCA
GAGCTCCATTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGT
GGAGAATTCAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAA
TACATCGCCTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGC
ATCCACATGGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACG
GGCTCGCCACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTC
ATTAAAAGCTTTCTAGACCAT
BS14607.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-RA | 489 | CG17329-PA | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-RA | 665 | CG17329-RA | 59..547 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16291342..16291830 | 17..505 | 2445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:00:34 has no hits.
BS14607.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:11 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 1..489 | 17..505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:00 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..547 | 5..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:43:32 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 59..545 | 17..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:11 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..547 | 5..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:42 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 59..545 | 17..503 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:42 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16291342..16291828 | 17..503 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:43:32 Download gff for
BS14607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16291342..16291828 | 17..503 | 100 | | Plus |
BS14607.pep Sequence
Translation from 16 to 504
> BS14607.pep
MEKIEKELERTEQQQQEPTEPSNGNLEEQVRKLRDHNLRVKHLNTQRRRI
LRLLQGKMLQYATLEERLHRIGELVLIAELHSGVKTLNQRLDRMVENSTC
SICLLPWTDNGIHRLVSLRCGHLFGSSCIHMAIRRNHRCPICRRRARHFH
VRRIYSPSFLSH*
BS14607.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-PA | 162 | CG17329-PA | 1..162 | 1..162 | 855 | 100 | Plus |
| CG13481-PC | 176 | CG13481-PC | 38..171 | 22..156 | 333 | 49.6 | Plus |
| CG13481-PB | 176 | CG13481-PB | 38..171 | 22..156 | 333 | 49.6 | Plus |
| CG14983-PA | 163 | CG14983-PA | 12..160 | 6..159 | 257 | 40.8 | Plus |
| CG31807-PB | 142 | CG31807-PB | 13..137 | 27..154 | 183 | 35.2 | Plus |
