Clone Sequence Records
BS14610.complete Sequence
1544 bp assembled on 2009-12-07
GenBank Submission: KX804748
> BS14610.complete
GAAGTTATCAGTCGACATGACGTCGTGGGGCAATATCTGCCGCATCTGCA
GCAGCCCCGCAGACTACGAGATATTCGCCAAGATTCCCACGTATTTGCAC
GGCTCCACAAACGAGTTTCTCAACTGGCAAAAGCCCATAAACGTTCTGCT
GGAGGAGACGACGGGCCTGAAAAACTCCACGGACGACGGACTGCCACGCA
ACATATGTGCGCCGTGCATCTCCTATCTCAAGCATGCCGTCACATTCCGG
GAACAGTGCATCAAGAACGCGCTGAGTCTCAAGCTGGCGGAGCTCTACCA
GCAGAAGAGGGTCAACGTTTCGGATGCGAACAAGATGGACAAGGAGAGCG
CCCTCTTCACGGCGGAGGATCTGAATTATGTGGAGCAGAGGCCAGTGCAT
AATCTTCTGCTAAACAACAGCGCCAACAAACTGGAGTCATCCAAGGACAA
GGTACACAAGCGACTGCTCAATCAGACGACTACCCAGCTAGACGGCAATG
CTGAGCAGAAGATCCAGTACTTAAACGTGCTGTTCAACAAGCAGCAGCCT
CACAACAGCATGCCCAGGCAACCGCGGGATGGCGAACTGCCATCGAGCAG
TGGCCAAAATGACGACGAAGATGACGACTATGCGGTGGCCAGTTCCAGCG
ACGACAACGAGGAGGCGGCCCTGCTGCGCAAGCACAAGAACTGCTATAAC
TACACCGAGACCAACTTCGAGGAGGACGATCCCATGGAGCAGGATCAGCT
GCAGCTGCGCGACATCAAAGTGAACATACCGGAGCCCATGTGGAAGGAGC
GCAAGTGTCCGGCATGCTCCAAACGCTTCATGTTCGAGGACTCGCATCAG
TCGCATCTGGACAACTGCGTCGAATACCAGTTCGTCACGTTTGTTACCGA
GGTGACCAAGTTGCTCGAGATTAGGCGACAGAAAATGGTCTCGCCGCACG
AGTTCATCCGCCGCATGATATTCGCTCTGCACAAAACTTGCGCCTGGCTG
CAGGAACATTCCATAGACTCGCTTCTGGCCGAGAAGCTCAATCAGGTGAA
GGTGTCCAACGGTGAGAAGATAGCTGAGCCGCCAATTCCCATAGATATAC
CCGATCCCCGGCCGGTGCAGGAACCATCTCTATTCGACTGTGCCAGCGGA
ACGACGACTCCGATCACGGAGGAGAACAACGTGCTGTACGCCATTGAGCG
CTCTGAAAGTTGCCATTCCCAGGGCACGCCGACGGTGAAAAAACCCATTC
CCATTCGCGGAAAGGCGGCGCTGGGAATCGGGCTGGACAAGCACAGGGAG
AGAGCCACGTTCCTCGAGAAGCTGCAACGGGCCGCTGTCTCTCCTGGCAC
AGTTTCGCAGGGTCCAGCGCCCGTTTTCTCAGCCCGCTGCGGGCAGTGCA
ATTTAGAATTTGACTCAGTCTCCGAACTGGAGGTGCACAACCACAATGCC
CACAGGGGCAATGAACTGAACGCCGACGACGAAGCCAAAAGGCGTCAAAT
AATCGCCCTCTTCGAGGATGATATTTAGAAGCTTTCTAGACCAT
BS14610.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1512 | CG15435-PB | 1..1512 | 17..1528 | 7560 | 100 | Plus |
| CG15435-RA | 1512 | CG15435-PA | 1..1512 | 17..1528 | 7560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:44:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 250..1761 | 17..1528 | 7560 | 100 | Plus |
| CG15435-RA | 1807 | CG15435-RA | 109..1620 | 17..1528 | 7560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:44:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460204..4461559 | 173..1528 | 6780 | 100 | Plus |
| 2L | 23513712 | 2L | 4459978..4460133 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:44:42 has no hits.
BS14610.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:27 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 1..1512 | 17..1528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:58 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 144..1655 | 17..1528 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:56:31 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 109..1620 | 17..1528 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:39:33 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 144..1655 | 17..1528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:49 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 109..1620 | 17..1528 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:49 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4459978..4460133 | 17..172 | 100 | -> | Plus |
| 2L | 4460204..4461559 | 173..1528 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:56:31 Download gff for
BS14610.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4459978..4460133 | 17..172 | 100 | -> | Plus |
| arm_2L | 4460204..4461559 | 173..1528 | 100 | | Plus |
BS14610.3prime Sequence
804 bp (690 high quality bases) assembled on 2006-10-13
> BS14610.3prime
ATGGTCTAGAAAGCTTCTAAATATCATCCTCGAAGAGGGCGATTATTTGA
CGCCTTTTGGCTTCGTCGTCGGCGTTCAGTTCATTGCCCCTGTGGGCATT
GTGGTTGTGCACCTCCAGTTCGGAGACTGAGTCAAATTCTAAATTGCACT
GCCCGCAGCGGGCTGAGAAAACGGGCGCTGGACCCTGCGAAACTGTGCCA
GGAGAGACAGCGGCCCGTTGCAGCTTCTCGAGGAACGTGGCTCTCTCCCT
GTGCTTGTCCAGCCCGATTCCCAGCGCCGCCTTTCCGCGAATGGGAATGG
GTTTTTTCACCGTCGGCGTGCCCTGGGAATGGCAACTTTCAGAGCGCTCA
ATGGCGTACAGCACGTTGTTCTCCTCCGTGATCGGAGTCGTCGTTCCGCT
GGCACAGTCGAATAGAGATGGTTCCTGCACCGGCCGGGGATCGGGTATAT
CTATGGGAATTGGCGGCTCAGCTATCTTCTCACCGTTGGACACCTTCACC
TGATTGAGCTTCTCGGCCAGAAGCGAGTCTATGGAATGTTCCTGCAGCCA
GGCGCAAGTTTTGTGCAGAGCGAATATCATGCGGCGGATGAACTCGTGCG
GCGAGACCATTTTCTGTCGCCTAATCTCGAGCAACTTGGTCACCTCGGTA
ACAAACGTGACGAACTGGTATTCGACGCAGTTGTCCAGATGCGACTGATG
CGAGTCCTCGAACATGAAGCGTTTGGAGCATGCCGGACACTTGCGCTCCT
TCCACATGGGCTCCGGTATGTTCACTTTGATGTCGCGCAGCTGCAGCTGA
TCCT
BS14610.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-PA | 1512 | CG15435-RA | 725..1512 | 804..17 | 3940 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 974..1761 | 804..17 | 3940 | 100 | Minus |
| CG15435-RA | 1807 | CG15435-RA | 833..1620 | 804..17 | 3940 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460772..4461559 | 804..17 | 3940 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:31:56 has no hits.
BS14610.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:19 Download gff for
BS14610.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-PA | 725..1512 | 17..804 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:09:54 Download gff for
BS14610.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 833..1626 | 7..804 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:16:53 Download gff for
BS14610.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 833..1626 | 7..804 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:16:53 Download gff for
BS14610.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4460772..4461565 | 7..804 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:09:54 Download gff for
BS14610.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4460772..4461565 | 7..804 | 99 | | Minus |
BS14610.5prime Sequence
740 bp (716 high quality bases) assembled on 2006-10-13
> BS14610.5prime
GAAGTTATCAGTCGACATGACGTCGTGGGGCAATATCTGCCGCATCTGCA
GCAGCCCCGCAGACTACGAGATATTCGCCAAGATTCCCACGTATTTGCAC
GGCTCCACAAACGAGTTTCTCAACTGGCAAAAGCCCATAAACGTTCTGCT
GGAGGAGACGACGGGCCTGAAAAACTCCACGGACGACGGACTGCCACGCA
ACATATGTGCGCCGTGCATCTCCTATCTCAAGCATGCCGTCACATTCCGG
GAACAGTGCATCAAGAACGCGCTGAGTCTCAAGCTGGCGGAGCTCTACCA
GCAGAAGAGGGTCAACGTTTCGGATGCGAACAAGATGGACAAGGAGAGCG
CCCTCTTCACGGCGGAGGATCTGAATTATGTGGAGCAGAGGCCAGTGCAT
AATCTTCTGCTAAACAACAGCGCCAACAAACTGGAGTCATCCAAGGACAA
GGTACACAAGCGACTGCTCAATCAGACGACTACCCAGCTAGACGGCAATG
CTGAGCAGAAGATCCAGTACTTAAACGTGCTGTTCAACAAGCAGCAGCCT
CACAACAGCATGCCCAGGCAACCGCGGGATGGCGAACTGCCATCGAGCAG
TGGCCAAAATGACGACGAAGATGACGACTATGCGGTGGCCAGTTCCAGCG
ACGACAACGAGGAGGCGGCCCTGCTGCGCAAGCACAAGAACTGCTATAAC
TACACCGAGACCAACTTCGAGGAGGACGATCCCATGGAGC
BS14610.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:47:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-PA | 1512 | CG15435-RA | 1..724 | 17..740 | 3620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 250..973 | 17..740 | 3620 | 100 | Plus |
| CG15435-RA | 1807 | CG15435-RA | 109..832 | 17..740 | 3620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:35:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460204..4460771 | 173..740 | 2840 | 100 | Plus |
| 2L | 23513712 | 2L | 4459978..4460133 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 07:35:44 has no hits.
BS14610.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:19 Download gff for
BS14610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-PA | 1..724 | 17..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:46:16 Download gff for
BS14610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 106..832 | 10..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:49:22 Download gff for
BS14610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 106..832 | 10..740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:49:22 Download gff for
BS14610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4459977..4460133 | 16..172 | 99 | -> | Plus |
| 2L | 4460204..4460771 | 173..740 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:46:16 Download gff for
BS14610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4459977..4460133 | 16..172 | 99 | -> | Plus |
| arm_2L | 4460204..4460771 | 173..740 | 100 | | Plus |
BS14610.pep Sequence
Translation from 16 to 1527
> BS14610.pep
MTSWGNICRICSSPADYEIFAKIPTYLHGSTNEFLNWQKPINVLLEETTG
LKNSTDDGLPRNICAPCISYLKHAVTFREQCIKNALSLKLAELYQQKRVN
VSDANKMDKESALFTAEDLNYVEQRPVHNLLLNNSANKLESSKDKVHKRL
LNQTTTQLDGNAEQKIQYLNVLFNKQQPHNSMPRQPRDGELPSSSGQNDD
EDDDYAVASSSDDNEEAALLRKHKNCYNYTETNFEEDDPMEQDQLQLRDI
KVNIPEPMWKERKCPACSKRFMFEDSHQSHLDNCVEYQFVTFVTEVTKLL
EIRRQKMVSPHEFIRRMIFALHKTCAWLQEHSIDSLLAEKLNQVKVSNGE
KIAEPPIPIDIPDPRPVQEPSLFDCASGTTTPITEENNVLYAIERSESCH
SQGTPTVKKPIPIRGKAALGIGLDKHRERATFLEKLQRAAVSPGTVSQGP
APVFSARCGQCNLEFDSVSELEVHNHNAHRGNELNADDEAKRRQIIALFE
DDI*
BS14610.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-PB | 503 | CG15435-PB | 1..503 | 1..503 | 2658 | 100 | Plus |
| CG15435-PA | 503 | CG15435-PA | 1..503 | 1..503 | 2658 | 100 | Plus |
