Clone BS14615 Report

Search the DGRC for BS14615

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptFer2LCH-RA
Protein status:BS14615.pep: full length peptide match
Sequenced Size:716

Clone Sequence Records

BS14615.complete Sequence

716 bp assembled on 2010-02-09

GenBank Submission: KX801963

> BS14615.complete
GAAGTTATCAGTCGACATGAAATTTTTCGTTGCACTCGCTCTCTTTGCGT
GCCTCGGCTCTCTTGCCTTGGCCAAGGATGATGAATATTGCCAGAACACT
GTAATCACCGCATGCTCTACGTCAGCCTTTTCGGCCAACTCCATTTGTAA
TGCCCGTTTTGCTGGCATTGACCATATTGAGCCCGAGATCCAGTCCTACA
TCAACGCCAACTTGGCCAAGTCGTACGACTACCTCCTGCTGGCCACCCAC
TTCAACTCCTACCAGAAGAACCGCCCCGGCTTCCAGAAGCTGTACCAGGG
ACTCTCGGACCGCTCCTTCGAGGACAGCATTGCCCTGATCAAGCAGGTGA
CCCGTCGCGGAGGAATCGTTGACTTCAACACCCGCCACGAGTCTTCCGGC
TCCGTGAGCACCAAGCGCGGCACTCTTGAGGTCGACGAACTGCACTCCCT
GGCTCTGGCTCTGGACACCGAGAAGCAGCTGGCCACCGGAGCCACTCACG
TGCACTCCCGTGCCACCCACGCCACCGACGCCGAGAGGGATCCCGAGCTG
GCCCACTACTTCGAGGAGAACTTCCTGGGCAAGCAGGCCGAGAGCGTGCG
CAAGCTGTCCGGTTATGCCAACGACCTCGCCAAGCTGATGAAGGTCCCCG
ACCCATCCCTGTCCGTCTACCTGTTCGACGAGTATCTGCAGAAGCAGTAA
AAGCTTTCTAGACCAT

BS14615.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
Fer2LCH-RD 684 CG1469-PD 1..684 17..700 3405 99.9 Plus
Fer2LCH-RC 684 CG1469-PC 1..684 17..700 3405 99.9 Plus
Fer2LCH-RB 684 CG1469-PB 1..684 17..700 3405 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
Fer2LCH-RD 1091 CG1469-RD 80..769 11..700 3435 99.9 Plus
Fer2LCH-RC 1078 CG1469-RC 67..756 11..700 3435 99.9 Plus
Fer2LCH-RB 1443 CG1469-RB 432..1121 11..700 3435 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30389696..30390262 134..700 2820 99.8 Plus
3R 32079331 3R 30389205..30389328 11..134 620 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:29:31 has no hits.

BS14615.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:39 Download gff for BS14615.complete
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RC 73..754 17..698 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:16 Download gff for BS14615.complete
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RB 438..1119 17..698 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:03 Download gff for BS14615.complete
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RC 73..754 17..698 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:08 Download gff for BS14615.complete
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RB 438..1119 17..698 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:08 Download gff for BS14615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30389211..30389328 17..134 100 -> Plus
3R 30389697..30390260 135..698 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:16 Download gff for BS14615.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26214933..26215050 17..134 100 -> Plus
arm_3R 26215419..26215982 135..698 99   Plus

BS14615.3prime Sequence

555 bp (482 high quality bases) assembled on 2006-10-13

> BS14615.3prime
ATGGTCTAGAAAGCTTTTACTGCTTCTGCAGATACTCGTCGAACAGGTAG
ACGGACAGGGATGGGTCGGGGACCTTCATCAGCTTGGCGAGGTCGTTGGC
ATAACCGGACAGCTTGCGCACGCTCTCGGCCTGCTTGCCCAGGAAGTTCT
CCTCGAAGTAGTGGGCCAGCTCGGGATCCCTCTCGGCGTCGGTGGCGTGG
GTGGCACGGGAGTGCACGTGAGTGGCTCCGGTGGCCAGCTGCTTCTCGGT
GTCCAGAGCCAGAGCCAGGGAGTGCAGTTCGTCGACCTCAAGAGTGCCGC
GCTTGGTGCTCACGGAGCCGGAAGACTCGTGGCGGGTGTTGAAGTCAACG
ATTCCTCCGCGACGGGTCACCTGCTTGATCAGGGCAATGCTGTCCTCGAA
GGAGCGGTCCGAGAGTCCCTGGTACAGCTTCTGGAAGCCGGGGCGGTTCT
TCTGGTAGGAGTTGAAGTGGGTGGCCAGCAGGAGGTAGTCGTACGACTTG
GCCAAGTTGGCGTTAGATGTAGGACTGGATCTCGGGCTCAATATTGGTCA
ATGCC

BS14615.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG1469-PA 684 Fer2LCH-RA 148..684 555..17 2590 99.4 Minus
CG1469-PB 684 Fer2LCH-RB 148..684 555..17 2590 99.4 Minus
CG1469-PC 684 Fer2LCH-RC 148..684 555..17 2590 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 02:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
Fer2LCH-RE 1118 CG1469-RE 260..796 555..17 2630 99.4 Minus
Fer2LCH-RD 1091 CG1469-RD 233..769 555..17 2630 99.4 Minus
Fer2LCH-RC 1078 CG1469-RC 220..756 555..17 2630 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 02:23:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30389726..30390262 555..17 2580 99.4 Minus
Blast to na_te.dros performed on 2015-02-05 02:23:58 has no hits.

BS14615.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:23 Download gff for BS14615.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1469-PC 148..684 17..555 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:11:14 Download gff for BS14615.3prime
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RC 220..756 17..555 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 03:05:10 Download gff for BS14615.3prime
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RC 220..756 17..555 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 03:05:10 Download gff for BS14615.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30389726..30390262 17..555 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:11:14 Download gff for BS14615.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26215448..26215984 17..555 99   Minus

BS14615.5prime Sequence

677 bp (676 high quality bases) assembled on 2006-10-13

> BS14615.5prime
GAAGTTATCAGTCGACATGAAATTTTTCGTTGCACTCGCTCTCTTTGCGT
GCCTCGGCTCTCTTGCCTTGGCCAAGGATGATGAATATTGCCAGAACACT
GTAATCACCGCATGCTCTACGTCAGCCTTTTCGGCCAACTCCATTTGTAA
TGCCCGTTTTGCTGGCATTGACCATATTGAGCCCGAGATCCAGTCCTACA
TCAACGCCAACTTGGCCAAGTCGTACGACTACCTCCTGCTGGCCACCCAC
TTCAACTCCTACCAGAAGAACCGCCCCGGCTTCCAGAAGCTGTACCAGGG
ACTCTCGGACCGCTCCTTCGAGGACAGCATTGCCCTGATCAAGCAGGTGA
CCCGTCGCGGAGGAATCGTTGACTTCAACACCCGCCACGAGTCTTCCGGC
TCCGTGAGCACCAAGCGCGGCACTCTTGAGGTCGACGAACTGCACTCCCT
GGCTCTGGCTCTGGACACCGAGAAGCAGCTGGCCACCGGAGCCACTCACG
TGCACTCCCGTGCCACCCACGCCACCGACGCCGAGAGGGATCCCGAGCTG
GCCCACTACTTCGAGGAGAACTTCCTGGGCAAGCAGGCCGAGAGCGTGCG
CAAGCTGTCCGGTTATGCCAACGACCTCGCCAAGCTGATGAAGGTCCCCG
ACCCCATCCCCTGTCCGTCTACCTGTT

BS14615.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG1469-PA 684 Fer2LCH-RA 1..659 17..677 3200 99.5 Plus
CG1469-PB 684 Fer2LCH-RB 1..659 17..677 3200 99.5 Plus
CG1469-PC 684 Fer2LCH-RC 1..659 17..677 3200 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Fer2LCH-RD 1091 CG1469-RD 80..744 11..677 3270 99.6 Plus
Fer2LCH-RC 1078 CG1469-RC 67..731 11..677 3270 99.6 Plus
Fer2LCH-RB 1443 CG1469-RB 432..1096 11..677 3270 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30389696..30390237 134..677 2610 99.1 Plus
3R 32079331 3R 30389205..30389328 11..134 620 100 Plus
Blast to na_te.dros performed on 2015-02-13 13:01:16 has no hits.

BS14615.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:23 Download gff for BS14615.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1469-PC 1..659 17..677 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:52:04 Download gff for BS14615.5prime
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RB 423..1096 1..677 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:28:13 Download gff for BS14615.5prime
Subject Subject Range Query Range Percent Splice Strand
Fer2LCH-RB 423..1096 1..677 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:28:13 Download gff for BS14615.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30389194..30389328 1..134 96 -> Plus
3R 30389697..30390237 135..677 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:52:04 Download gff for BS14615.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26214916..26215050 1..134 96 -> Plus
arm_3R 26215419..26215959 135..677 99   Plus

BS14615.pep Sequence

Translation from 16 to 699

> BS14615.pep
MKFFVALALFACLGSLALAKDDEYCQNTVITACSTSAFSANSICNARFAG
IDHIEPEIQSYINANLAKSYDYLLLATHFNSYQKNRPGFQKLYQGLSDRS
FEDSIALIKQVTRRGGIVDFNTRHESSGSVSTKRGTLEVDELHSLALALD
TEKQLATGATHVHSRATHATDAERDPELAHYFEENFLGKQAESVRKLSGY
ANDLAKLMKVPDPSLSVYLFDEYLQKQ*

BS14615.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
Fer2LCH-PD 227 CG1469-PD 1..227 1..227 1161 100 Plus
Fer2LCH-PC 227 CG1469-PC 1..227 1..227 1161 100 Plus
Fer2LCH-PB 227 CG1469-PB 1..227 1..227 1161 100 Plus
Fer2LCH-PA 227 CG1469-PA 1..227 1..227 1161 100 Plus
Fer2LCH-PE 236 CG1469-PE 1..236 1..227 1141 96.2 Plus