Clone Sequence Records
BS14632.complete Sequence
1655 bp assembled on 2009-12-07
GenBank Submission: KX805319
> BS14632.complete
GAAGTTATCAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGA
AGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTG
AAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTT
CCACGACTTTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGC
CCATGATCCTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATC
CGCTATCTGCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCC
AACGACGGACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGA
TACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTG
TCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGC
CTCGCCTGTGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCT
CCGGCGAAAAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTG
GAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCA
CAAACTGGACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGG
GACACGACGACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGAT
CACCAGCAGTTAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAA
GGTGCTGCAGACGCCGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTGGG
ACCAGCCGCTGCGCTTCGACGCCAACCGCCGACTGTTCGAGGACGAGGAA
CAGGATCTGTTCAGGGATCTGCAGTCCCTGCCGCGTAACGCCGCCCTGCG
CAAGCTGAACGATCTGATCAAGCGGGCGCGCCTGGCCAAGGTGCATGCCT
TCATCATTGCCGAGCTGCGCAAGGACATGCCCTCTGTGTTCGGCAAGGAC
AGCAAGAAGAAGGACTTGATTAAGAACCTCGGCCAGGTATACGATCGCAT
CCAGCGCGAGCACTCCATTTCTCCCGGCGACTTCCCCGACATCAAGAAGA
TGCAGGAGGTCCTGCAGCACCAGGACTTCACCAAGTTCCACTCCCTCAAG
CCCCATCTGCTGGACATCGTGGACAACATGCTGGCCAAGGACATTGCCCG
CCTGATGGAGATGATTCCCCAGGAGGAGATGACCATGGTCGCGGACCCAA
TCGTCAAGGGTGGTGCCTTCGAGGGAGTCATCGACGACCATGTCTCACCA
TTCGGCTACATGAAGGGCGAGGGCATCGATGCCGGCTACGGAGAGCACGA
GTGGATCTGCAACAAGGACAAGCCGCGCACAGATGGCATCTTCAATGGGC
TGGGACCAGTCGATGGCAAGATATCCGGTGCAACTGCCAAGCAGGAACTC
ATCAAATCGAAACTGCCCAACTCGGTGCTCAGCAAGATCTGGAAACTGTC
GGACGTCGACGGCGATGGGTTCCTGGACTCTGACGAGTTCGCGCTGGCCT
TGCACTTAATCAACGTCAAGCTGGAAGGCTGCGAGCTGCCCACCGTGCTG
CCGGAGCACTTAGTACCGCCGTCGAAGCGCTATGACTAGAAGCTTTCTAG
ACCAT
BS14632.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:53:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Past1-RA | 1623 | CG6148-PA | 1..1623 | 17..1639 | 8040 | 99.7 | Plus |
Past1-RB | 1605 | CG6148-PB | 7..1605 | 41..1639 | 7920 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Past1-RA | 1866 | CG6148-RA | 192..1814 | 17..1639 | 8040 | 99.7 | Plus |
Past1-RB | 2679 | CG6148-RB | 287..1885 | 41..1639 | 7920 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12698117..12699337 | 41..1261 | 6030 | 99.6 | Plus |
3R | 32079331 | 3R | 12703871..12704081 | 1429..1639 | 1040 | 99.5 | Plus |
3R | 32079331 | 3R | 12703638..12703812 | 1259..1433 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:53:44 has no hits.
BS14632.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:51 Download gff for
BS14632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 192..1814 | 17..1639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:00:47 Download gff for
BS14632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 192..1814 | 17..1639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:23 Download gff for
BS14632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 192..1814 | 17..1639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:24 Download gff for
BS14632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 192..1814 | 17..1639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:24 Download gff for
BS14632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12697513..12697538 | 17..42 | 100 | -> | Plus |
3R | 12698119..12699335 | 43..1259 | 99 | -> | Plus |
3R | 12703639..12703812 | 1260..1433 | 100 | -> | Plus |
3R | 12703876..12704081 | 1434..1639 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:00:47 Download gff for
BS14632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8529361..8529534 | 1260..1433 | 100 | -> | Plus |
arm_3R | 8529598..8529803 | 1434..1639 | 100 | | Plus |
arm_3R | 8523235..8523260 | 17..42 | 100 | -> | Plus |
arm_3R | 8523841..8525057 | 43..1259 | 99 | -> | Plus |
BS14632.3prime Sequence
797 bp (736 high quality bases) assembled on 2006-10-13
> BS14632.3prime
ATGGTCTAGAAAGCTTCTAGTCATAGCGCTTCGACGGCGGTACTAAGTGC
TCCGGCAGCACGGTGGGCAGCTCGCAGCCTTCCAGCTTGACGTTGATTAA
GTGCAAGGCCAGCGCGAACTCGTCAGAGTCCAGGAACCCATCGCCGTCGA
CGTCCGACAGTTTCCAGATCTTGCTGAGCACCGAGTTGGGCAGTTTCGAT
TTGATGAGTTCCTGCTTGGCAGTTGCACCGGATATCTTGCCATCGACTGG
TCCCAGCCCATTGAAGATGCCATCTGTGCGCGGCTTGTCCTTGTTGCAGA
TCCACTCGTGCTCTCCGTAGCCGGCATCGATGCCCTCGCCCTTCATGTAG
CCGAATGGTGAGACATGGTCGTCGATGACTCCCTCGAAGGCACCACCCTT
GACGATTGGGTCCGCGACCATGGTCATCTCCTCCTGGGGAATCATCTCCA
TCAGGCGGGCAATGTCCTTGGCCAGCATGTTGTCCACGATGTCCAGCAGA
TGGGGCTTGAGGGAGTGGAACTTGGTGAAGTCCTGGTGCTGCAGGACCTC
CTGCATCTTCTTGATGTCGGGGAAGTCGCCGGGAGAAATGGAGTGCTCGC
GCTGGATGCGATCGTATACCTGGCCGAGGTTCTTAATCAAGTCCTTCTTC
TTGCTGTCCTTGCCGAACACAGAGGGCATGTCCTTGCGCAGCTCGGCAAT
GATGAAGGCATGCACCTTGGCCAGGCGCGCCCGCTTGATCAGATCGTTCA
GCTTGCGCAGGGCGGCGTTACGCGGCAGGGACTGCAGATCCCTGAAC
BS14632.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6148-PA | 1623 | Past1-RA | 843..1623 | 797..17 | 3905 | 100 | Minus |
CG6148-PB | 1605 | Past1-RB | 825..1605 | 797..17 | 3905 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:16:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Past1-RB | 2679 | CG6148-RB | 1105..1885 | 797..17 | 3905 | 100 | Minus |
Past1-RA | 1866 | CG6148-RA | 1034..1814 | 797..17 | 3905 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:16:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12698935..12699337 | 797..395 | 2015 | 100 | Minus |
3R | 32079331 | 3R | 12703871..12704081 | 227..17 | 1040 | 99.5 | Minus |
3R | 32079331 | 3R | 12703638..12703812 | 397..223 | 875 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 06:16:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3046..3134 | 619..532 | 109 | 59.6 | Minus |
BS14632.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:35 Download gff for
BS14632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6148-PB | 825..1605 | 17..797 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:45:16 Download gff for
BS14632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 1034..1814 | 17..797 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:21:55 Download gff for
BS14632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 1034..1814 | 17..797 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:21:55 Download gff for
BS14632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12698935..12699335 | 397..797 | 100 | -> | Minus |
3R | 12703639..12703812 | 223..396 | 100 | -> | Minus |
3R | 12703876..12704081 | 17..222 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:45:16 Download gff for
BS14632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8529361..8529534 | 223..396 | 100 | -> | Minus |
arm_3R | 8529598..8529803 | 17..222 | 100 | | Minus |
arm_3R | 8524657..8525057 | 397..797 | 100 | -> | Minus |
BS14632.5prime Sequence
798 bp (745 high quality bases) assembled on 2006-10-13
> BS14632.5prime
GAAGTTATCAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGA
AGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTG
AAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTT
CCACGACTTTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGC
CCATGATCCTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATC
CGCTATCTGCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCC
AACGACGGACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGA
TACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTG
TCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGC
CTCGCCTGTGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCT
CCGGCGAAAAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTG
GAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCA
CAAACTGGACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGG
GACACGACGACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGAT
CACCAGCAGTTAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAA
GGTGCTGCAGACGCCGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTG
BS14632.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6148-PA | 1623 | Past1-RA | 1..782 | 17..798 | 3785 | 99.3 | Plus |
CG6148-PB | 1605 | Past1-RB | 7..764 | 41..798 | 3665 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:19:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Past1-RA | 1866 | CG6148-RA | 192..973 | 17..798 | 3835 | 99.4 | Plus |
Past1-RB | 2679 | CG6148-RB | 287..1044 | 41..798 | 3715 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:19:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12698117..12698874 | 41..798 | 3715 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:19:50 has no hits.
BS14632.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:36 Download gff for
BS14632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6148-PA | 1..782 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:57:32 Download gff for
BS14632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 182..973 | 7..798 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:35:45 Download gff for
BS14632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Past1-RA | 182..973 | 7..798 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:35:45 Download gff for
BS14632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12698119..12698874 | 43..798 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:57:32 Download gff for
BS14632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8523841..8524596 | 43..798 | 99 | | Plus |
BS14632.pep Sequence
Translation from 16 to 1638
> BS14632.pep
MPRPEAGDSFLKREKNTQEVVENVIGELKKIYRSKLLPLEEHYQFHDFHS
PKLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRF
IAVMYDDKEGVIPGNALVVDPKKQFRPLSKYGNAFLNRFQCSSVASPVLN
AISIVDTPGILSGEKQRIDRGYDFTGVLEWFAERVDRIILLFDAHKLDIS
DEFRRSIEALKGHDDKIRIILNKADMIDHQQLMRVYGALMWSLGKVLQTP
EVARVYIGSFWDQPLRFDANRRLFEDEEQDLFRDLQSLPRNAALRKLNDL
IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVYDRIQREHS
ISPGDFPDIKKMQEVLQHQDFTKFHSLKPHLLDIVDNMLAKDIARLMEMI
PQEEMTMVADPIVKGGAFEGVIDDHVSPFGYMKGEGIDAGYGEHEWICNK
DKPRTDGIFNGLGPVDGKISGATAKQELIKSKLPNSVLSKIWKLSDVDGD
GFLDSDEFALALHLINVKLEGCELPTVLPEHLVPPSKRYD*
BS14632.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:53:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Past1-PA | 540 | CG6148-PA | 1..540 | 1..540 | 2820 | 100 | Plus |
Past1-PB | 534 | CG6148-PB | 3..534 | 9..540 | 2775 | 100 | Plus |
CG9297-PA | 930 | CG9297-PA | 497..872 | 8..378 | 463 | 29.3 | Plus |
CG9297-PE | 952 | CG9297-PE | 519..894 | 8..378 | 463 | 29.3 | Plus |
CG9297-PD | 952 | CG9297-PD | 519..894 | 8..378 | 463 | 29.3 | Plus |