Clone BS14632 Report

Search the DGRC for BS14632

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptPast1-RA
Protein status:BS14632.pep: full length peptide match
Sequenced Size:1655

Clone Sequence Records

BS14632.complete Sequence

1655 bp assembled on 2009-12-07

GenBank Submission: KX805319

> BS14632.complete
GAAGTTATCAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGA
AGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTG
AAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTT
CCACGACTTTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGC
CCATGATCCTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATC
CGCTATCTGCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCC
AACGACGGACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGA
TACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTG
TCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGC
CTCGCCTGTGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCT
CCGGCGAAAAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTG
GAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCA
CAAACTGGACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGG
GACACGACGACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGAT
CACCAGCAGTTAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAA
GGTGCTGCAGACGCCGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTGGG
ACCAGCCGCTGCGCTTCGACGCCAACCGCCGACTGTTCGAGGACGAGGAA
CAGGATCTGTTCAGGGATCTGCAGTCCCTGCCGCGTAACGCCGCCCTGCG
CAAGCTGAACGATCTGATCAAGCGGGCGCGCCTGGCCAAGGTGCATGCCT
TCATCATTGCCGAGCTGCGCAAGGACATGCCCTCTGTGTTCGGCAAGGAC
AGCAAGAAGAAGGACTTGATTAAGAACCTCGGCCAGGTATACGATCGCAT
CCAGCGCGAGCACTCCATTTCTCCCGGCGACTTCCCCGACATCAAGAAGA
TGCAGGAGGTCCTGCAGCACCAGGACTTCACCAAGTTCCACTCCCTCAAG
CCCCATCTGCTGGACATCGTGGACAACATGCTGGCCAAGGACATTGCCCG
CCTGATGGAGATGATTCCCCAGGAGGAGATGACCATGGTCGCGGACCCAA
TCGTCAAGGGTGGTGCCTTCGAGGGAGTCATCGACGACCATGTCTCACCA
TTCGGCTACATGAAGGGCGAGGGCATCGATGCCGGCTACGGAGAGCACGA
GTGGATCTGCAACAAGGACAAGCCGCGCACAGATGGCATCTTCAATGGGC
TGGGACCAGTCGATGGCAAGATATCCGGTGCAACTGCCAAGCAGGAACTC
ATCAAATCGAAACTGCCCAACTCGGTGCTCAGCAAGATCTGGAAACTGTC
GGACGTCGACGGCGATGGGTTCCTGGACTCTGACGAGTTCGCGCTGGCCT
TGCACTTAATCAACGTCAAGCTGGAAGGCTGCGAGCTGCCCACCGTGCTG
CCGGAGCACTTAGTACCGCCGTCGAAGCGCTATGACTAGAAGCTTTCTAG
ACCAT

BS14632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RA 1623 CG6148-PA 1..1623 17..1639 8040 99.7 Plus
Past1-RB 1605 CG6148-PB 7..1605 41..1639 7920 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RA 1866 CG6148-RA 192..1814 17..1639 8040 99.7 Plus
Past1-RB 2679 CG6148-RB 287..1885 41..1639 7920 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12698117..12699337 41..1261 6030 99.6 Plus
3R 32079331 3R 12703871..12704081 1429..1639 1040 99.5 Plus
3R 32079331 3R 12703638..12703812 1259..1433 875 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:53:44 has no hits.

BS14632.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:51 Download gff for BS14632.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 192..1814 17..1639 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:00:47 Download gff for BS14632.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 192..1814 17..1639 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:23 Download gff for BS14632.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 192..1814 17..1639 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:24 Download gff for BS14632.complete
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 192..1814 17..1639 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:24 Download gff for BS14632.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12697513..12697538 17..42 100 -> Plus
3R 12698119..12699335 43..1259 99 -> Plus
3R 12703639..12703812 1260..1433 100 -> Plus
3R 12703876..12704081 1434..1639 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:00:47 Download gff for BS14632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8529361..8529534 1260..1433 100 -> Plus
arm_3R 8529598..8529803 1434..1639 100   Plus
arm_3R 8523235..8523260 17..42 100 -> Plus
arm_3R 8523841..8525057 43..1259 99 -> Plus

BS14632.3prime Sequence

797 bp (736 high quality bases) assembled on 2006-10-13

> BS14632.3prime
ATGGTCTAGAAAGCTTCTAGTCATAGCGCTTCGACGGCGGTACTAAGTGC
TCCGGCAGCACGGTGGGCAGCTCGCAGCCTTCCAGCTTGACGTTGATTAA
GTGCAAGGCCAGCGCGAACTCGTCAGAGTCCAGGAACCCATCGCCGTCGA
CGTCCGACAGTTTCCAGATCTTGCTGAGCACCGAGTTGGGCAGTTTCGAT
TTGATGAGTTCCTGCTTGGCAGTTGCACCGGATATCTTGCCATCGACTGG
TCCCAGCCCATTGAAGATGCCATCTGTGCGCGGCTTGTCCTTGTTGCAGA
TCCACTCGTGCTCTCCGTAGCCGGCATCGATGCCCTCGCCCTTCATGTAG
CCGAATGGTGAGACATGGTCGTCGATGACTCCCTCGAAGGCACCACCCTT
GACGATTGGGTCCGCGACCATGGTCATCTCCTCCTGGGGAATCATCTCCA
TCAGGCGGGCAATGTCCTTGGCCAGCATGTTGTCCACGATGTCCAGCAGA
TGGGGCTTGAGGGAGTGGAACTTGGTGAAGTCCTGGTGCTGCAGGACCTC
CTGCATCTTCTTGATGTCGGGGAAGTCGCCGGGAGAAATGGAGTGCTCGC
GCTGGATGCGATCGTATACCTGGCCGAGGTTCTTAATCAAGTCCTTCTTC
TTGCTGTCCTTGCCGAACACAGAGGGCATGTCCTTGCGCAGCTCGGCAAT
GATGAAGGCATGCACCTTGGCCAGGCGCGCCCGCTTGATCAGATCGTTCA
GCTTGCGCAGGGCGGCGTTACGCGGCAGGGACTGCAGATCCCTGAAC

BS14632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6148-PA 1623 Past1-RA 843..1623 797..17 3905 100 Minus
CG6148-PB 1605 Past1-RB 825..1605 797..17 3905 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RB 2679 CG6148-RB 1105..1885 797..17 3905 100 Minus
Past1-RA 1866 CG6148-RA 1034..1814 797..17 3905 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:16:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12698935..12699337 797..395 2015 100 Minus
3R 32079331 3R 12703871..12704081 227..17 1040 99.5 Minus
3R 32079331 3R 12703638..12703812 397..223 875 100 Minus
Blast to na_te.dros performed 2015-02-13 06:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 3046..3134 619..532 109 59.6 Minus

BS14632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:35 Download gff for BS14632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6148-PB 825..1605 17..797 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:45:16 Download gff for BS14632.3prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 1034..1814 17..797 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:21:55 Download gff for BS14632.3prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 1034..1814 17..797 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:21:55 Download gff for BS14632.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 12698935..12699335 397..797 100 -> Minus
3R 12703639..12703812 223..396 100 -> Minus
3R 12703876..12704081 17..222 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:45:16 Download gff for BS14632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8529361..8529534 223..396 100 -> Minus
arm_3R 8529598..8529803 17..222 100   Minus
arm_3R 8524657..8525057 397..797 100 -> Minus

BS14632.5prime Sequence

798 bp (745 high quality bases) assembled on 2006-10-13

> BS14632.5prime
GAAGTTATCAGTCGACATGCCACGCCCAGAAGCAGGCGACAGCTTTCTGA
AGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAATGTGATCGGCGAGCTG
AAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGAGGAGCACTACCAGTT
CCACGACTTTCACTCGCCAAAGCTCGAGGATCCAGACTTCGATGCGAAGC
CCATGATCCTGCTGGTGGGCCAGTACTCCACGGGCAAGACGACCTTCATC
CGCTATCTGCTGGAACGCGACTTTCCGGGCATTAGAATTGGTCCGGAGCC
AACGACGGACCGCTTCATCGCCGTGATGTACGACGACAAGGAGGGTGTGA
TACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAGCAGTTCCGGCCGCTG
TCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCAATGCAGCAGTGTGGC
CTCGCCTGTGCTGAACGCCATCTCCATCGTAGACACGCCCGGAATTCTCT
CCGGCGAAAAGCAGCGCATCGACAGGGGCTACGACTTCACCGGCGTGCTG
GAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCTGCTGTTCGACGCCCA
CAAACTGGACATCTCCGACGAGTTCCGGCGCTCGATCGAGGCGCTCAAGG
GACACGACGACAAGATCCGTATTATCCTGAACAAGGCCGACATGATTGAT
CACCAGCAGTTAATGCGGGTGTACGGAGCACTGATGTGGTCGCTGGGCAA
GGTGCTGCAGACGCCGGAGGTGGCTCGTGTCTACATCGGCTCCTTCTG

BS14632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG6148-PA 1623 Past1-RA 1..782 17..798 3785 99.3 Plus
CG6148-PB 1605 Past1-RB 7..764 41..798 3665 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-RA 1866 CG6148-RA 192..973 17..798 3835 99.4 Plus
Past1-RB 2679 CG6148-RB 287..1044 41..798 3715 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12698117..12698874 41..798 3715 99.3 Plus
Blast to na_te.dros performed on 2015-02-10 23:19:50 has no hits.

BS14632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:36 Download gff for BS14632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6148-PA 1..782 17..798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:57:32 Download gff for BS14632.5prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 182..973 7..798 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:35:45 Download gff for BS14632.5prime
Subject Subject Range Query Range Percent Splice Strand
Past1-RA 182..973 7..798 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:35:45 Download gff for BS14632.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12698119..12698874 43..798 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:57:32 Download gff for BS14632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8523841..8524596 43..798 99   Plus

BS14632.pep Sequence

Translation from 16 to 1638

> BS14632.pep
MPRPEAGDSFLKREKNTQEVVENVIGELKKIYRSKLLPLEEHYQFHDFHS
PKLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRF
IAVMYDDKEGVIPGNALVVDPKKQFRPLSKYGNAFLNRFQCSSVASPVLN
AISIVDTPGILSGEKQRIDRGYDFTGVLEWFAERVDRIILLFDAHKLDIS
DEFRRSIEALKGHDDKIRIILNKADMIDHQQLMRVYGALMWSLGKVLQTP
EVARVYIGSFWDQPLRFDANRRLFEDEEQDLFRDLQSLPRNAALRKLNDL
IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVYDRIQREHS
ISPGDFPDIKKMQEVLQHQDFTKFHSLKPHLLDIVDNMLAKDIARLMEMI
PQEEMTMVADPIVKGGAFEGVIDDHVSPFGYMKGEGIDAGYGEHEWICNK
DKPRTDGIFNGLGPVDGKISGATAKQELIKSKLPNSVLSKIWKLSDVDGD
GFLDSDEFALALHLINVKLEGCELPTVLPEHLVPPSKRYD*

BS14632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:53:54
Subject Length Description Subject Range Query Range Score Percent Strand
Past1-PA 540 CG6148-PA 1..540 1..540 2820 100 Plus
Past1-PB 534 CG6148-PB 3..534 9..540 2775 100 Plus
CG9297-PA 930 CG9297-PA 497..872 8..378 463 29.3 Plus
CG9297-PE 952 CG9297-PE 519..894 8..378 463 29.3 Plus
CG9297-PD 952 CG9297-PD 519..894 8..378 463 29.3 Plus