Clone BS14637 Report

Search the DGRC for BS14637

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG3568-RA
Protein status:BS14637.pep: full length peptide match
Sequenced Size:1559

Clone Sequence Records

BS14637.complete Sequence

1559 bp assembled on 2009-12-07

GenBank Submission: KX803020

> BS14637.complete
GAAGTTATCAGTCGACATGAGATCTTTTCTTTATATGCTCTCCCAACGTC
CCAAATTGGCATGTTTGTGCGGAAAATCTATTATCATATGGCCTGGTAAA
CGTACAAATCTGCCGGAAAATGCTTTCACTCAGCGGATGCTTCAAGAATG
TGGCCAAATGGCAAAGCCGGACGCTTCGGTGGATCTCGATAATTTCAAAG
CTATTTCGGAGCAGTCTCCCGCCGAGTTTGGCATCGATTCCTGCCGAGTG
AAGGCACAGCCGGAAGATCGAAGTGACCGCATACGGGAACAAATCGCATC
CGCCTATCCGGTGATTCACGAACGGACCCTCCTACTCTTTATCAGCTTCT
TAGAGCACAAGCTCACGTTCGGCAGCGAGCAGGAGAAGGCCATCTACAAG
GACATGACTGTGGTTGACCTTGTGCAGCGCCTGCTGGCGAAGAGATGTGT
GTGGTTCTTTGGCGCTAACGACTATTACCGTACAATGCAGGGAAATATTG
GTAACGAGGGCTTCGAGGCAGTGGGTACGCCCGCCGAAAAGGAACCCCTC
ACTTTGACCTCGGTGCTCAGCTACGACGAGATCAAGCTGTCCGCCCTGCT
CTACGTGTCCTGCCACTCGGAGTTCATTAACAATGGCAGTAGGGTCAATG
GGGGTGAGGTGCTGCAGAATAAGGACACTATCGAACGGGAGGGCGTTGTG
ATTGGACTAATTGGAGCTCGTTTCGAGCGTCCCGATGTGATGGAGTACCA
GGATATCATGATTACTAAAACCCAAAATACTGAGGCCAATGGCTACGGTT
TCGATTTGGAACAGATATCCAGCGAGACGGTCACACCTGCATCAGATTTG
CGCAGAATCTGGCGCGAGTTCTACGAGGAGCCCAGGGACTTCATTTACGC
CGACACTCCGTATGATACTACGCGTTTCGAAGAGGTTTCTCAGGGCATCT
TCGATCACCAGGTAATGCGCAAGCGATATGCCATCAGTTTCGACACCCTG
CTCTTGGAGGCACAGGACAGAGCATTTAAGGCTGGTAAGCCCGCCTATAT
CCATGTGGTCGGCATCGGACTGGGCGTTTGGAAGGCAGCTAGACAGCAGG
AGCGCACCTTCCTTGAATCTTTTGAGGGACGATTGCGGGCACTTGGAGAA
CGACTAAGCCACATCGGAGTGGTACACTTCTCATGGTTTCATTTGGCATG
TGTGGGCAGCTTGCATGACGGAGCCATCATTCCCGTGGACAAACATCCCC
AGGGTGGCATTCGCATTCGCAATTCGGTCCGAAATCCCGGAGACAAACTA
ACGGAGGACATGTTGCCCGTGGTGACATACGCCTGGGATGGAAATGCCCT
GCCTGGCAACGAATTTTGGGCGAATATGCTAATCAGCACTGGGGATCCAG
CAGCAGCCTGTTCCACTTTAATCTCTGAACTCCAAAATCCCCACATTAAT
GTGCACTATATGAACGGAGCCAATCTGCACATTGCATCAGTGGAACACGG
ACTACTCCATGTAGGCGACTACGCTAGGCGACTGATTGTGTAAAAGCTTT
CTAGACCAT

BS14637.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-RA 1527 CG3568-PA 1..1527 17..1543 7635 100 Plus
CG2909-RA 1518 CG2909-PA 994..1056 1049..1111 180 85.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-RA 1693 CG3568-RA 74..1601 17..1544 7640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4543175..4544176 371..1372 5010 100 Plus
X 23542271 X 4542703..4542912 17..226 1050 100 Plus
X 23542271 X 4544233..4544405 1372..1544 865 100 Plus
X 23542271 X 4542976..4543123 225..372 740 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:15:44 has no hits.

BS14637.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:32 Download gff for BS14637.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 67..1591 17..1541 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:00 Download gff for BS14637.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 74..1598 17..1541 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:14:52 Download gff for BS14637.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 67..1591 17..1541 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:36 Download gff for BS14637.complete
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 74..1598 17..1541 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:36 Download gff for BS14637.complete
Subject Subject Range Query Range Percent Splice Strand
X 4542703..4542912 17..226 100 -> Plus
X 4542978..4543122 227..371 100 -> Plus
X 4543176..4544176 372..1372 100 -> Plus
X 4544234..4544402 1373..1541 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:00 Download gff for BS14637.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4438267..4438435 1373..1541 100   Plus
arm_X 4436736..4436945 17..226 100 -> Plus
arm_X 4437011..4437155 227..371 100 -> Plus
arm_X 4437209..4438209 372..1372 100 -> Plus

BS14637.3prime Sequence

736 bp (697 high quality bases) assembled on 2006-10-13

> BS14637.3prime
ATGGTCTAGAAAGCTTTTACACAATCAGTCGCCTAGCGTAGTCGCCTACA
TGGAGTAGTCCGTGTTCCACTGATGCAATGTGCAGATTGGCTCCGTTCAT
ATAGTGCACATTAATGTGGGGATTTTGGAGTTCAGAGATTAAAGTGGAAC
AGGCTGCTGCTGGATCCCCAGTGCTGATTAGCATATTCGCCCAAAATTCG
TTGCCAGGCAGGGCATTTCCATCCCAGGCGTATGTCACCACGGGCAACAT
GTCCTCCGTTAGTTTGTCTCCGGGATTTCGGACCGAATTGCGAATGCGAA
TGCCACCCTGGGGATGTTTGTCCACGGGAATGATGGCTCCGTCATGCAAG
CTGCCCACACATGCCAAATGAAACCATGAGAAGTGTACCACTCCGATGTG
GCTTAGTCGTTCTCCAAGTGCCCGCAATCGTCCCTCAAAAGATTCAAGGA
AGGTGCGCTCCTGCTGTCTAGCTGCCTTCCAAACGCCCAGTCCGATGCCG
ACCACATGGATATAGGCGGGCTTACCAGCCTTAAATGCTCTGTCCTGTGC
CTCCAAGAGCAGGGTGTCGAAACTGATGGCATATCGCTTGCGCATTACCT
GGTGATCGAAGATGCCCCTGAGAAACCTCTTCGAAACGCGTAGTATCATA
CGGAGTGTCGGCGTAAATGAAGTCCCTGGGCTCCTCGTAGAACTCGCGCC
AGATTCTGCGCAAATCTGATGCAGGTGTGACCGTCT

BS14637.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-PA 1527 CG3568-RA 809..1527 736..17 3560 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-RA 1693 CG3568-RA 882..1601 736..16 3580 99.9 Minus
CG2909-RA 2018 CG2909-RA 1072..1210 587..449 195 78.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:20:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4543629..4544176 736..188 2695 99.8 Minus
X 23542271 X 4544233..4544405 188..16 865 100 Minus
X 23542271 X 10327737..10327799 511..449 180 85.7 Minus
Blast to na_te.dros performed on 2015-02-10 23:20:32 has no hits.

BS14637.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:40 Download gff for BS14637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3568-PA 809..1527 17..736 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:57:33 Download gff for BS14637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 882..1601 16..736 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:38:29 Download gff for BS14637.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 882..1601 16..736 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:38:29 Download gff for BS14637.3prime
Subject Subject Range Query Range Percent Splice Strand
X 4543629..4544176 188..736 99 -> Minus
X 4544234..4544405 16..187 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:57:33 Download gff for BS14637.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4437662..4438209 188..736 99 -> Minus
arm_X 4438267..4438438 16..187 100   Minus

BS14637.5prime Sequence

771 bp (718 high quality bases) assembled on 2006-10-13

> BS14637.5prime
GAAGTTATCAGTCGACATGAGATCTTTTCTTTATATGCTCTCCCAACGTC
CCAAATTGGCATGTTTGTGCGGAAAATCTATTATCATATGGCCTGGTAAA
CGTACAAATCTGCCGGAAAATGCTTTCACTCAGCGGATGCTTCAAGAATG
TGGCCAAATGGCAAAGCCGGACGCTTCGGTGGATCTCGATAATTTCAAAG
CTATTTCGGAGCAGTCTCCCGCCGAGTTTGGCATCGATTCCTGCCGAGTG
AAGGCACAGCCGGAAGATCGAAGTGACCGCATACGGGAACAAATCGCATC
CGCCTATCCGGTGATTCACGAACGGACCCTCCTACTCTTTATCAGCTTCT
TAGAGCACAAGCTCACGTTCGGCAGCGAGCAGGAGAAGGCCATCTACAAG
GACATGACTGTGGTTGACCTTGTGCAGCGCCTGCTGGCGAAGAGATGTGT
GTGGTTCTTTGGCGCTAACGACTATTACCGTACAATGCAGGGAAATATTG
GTAACGAGGGCTTCGAGGCAGTGGGTACGCCCGCCGAAAAGGAACCCCTC
ACTTTGACCTCGGTGCTCAGCTACGACGAGATCAAGCTGTCCGCCCTGCT
CTACGTGTCCTGCCACTCGGAGTTCATTAACAATGGCAGTAGGGTCAATG
GGGGTGAGGTGCTGCAGAATAAGGACACTATCGAACGGGAGGGCGTTGTG
ATTGGACTAATTGGAGCTCGTTTCGAGCGTCCCCGATGTGATGGAGTACC
AGGAATATCATGATTACTAAA

BS14637.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-PA 1527 CG3568-RA 1..753 17..771 3695 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-RA 1693 CG3568-RA 74..826 17..771 3725 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:30:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4543175..4543573 371..771 1905 99.5 Plus
X 23542271 X 4542703..4542912 17..226 1050 100 Plus
X 23542271 X 4542976..4543123 225..372 740 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:30:37 has no hits.

BS14637.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:40 Download gff for BS14637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3568-PA 1..750 17..768 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:11:54 Download gff for BS14637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 68..823 10..768 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:16:28 Download gff for BS14637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3568-RA 68..823 10..768 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:16:28 Download gff for BS14637.5prime
Subject Subject Range Query Range Percent Splice Strand
X 4542697..4542912 10..226 98 -> Plus
X 4542978..4543122 227..371 100 -> Plus
X 4543176..4543570 372..768 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:11:54 Download gff for BS14637.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4436730..4436945 10..226 98 -> Plus
arm_X 4437011..4437155 227..371 100 -> Plus
arm_X 4437209..4437603 372..768 99   Plus

BS14637.pep Sequence

Translation from 16 to 1542

> BS14637.pep
MRSFLYMLSQRPKLACLCGKSIIIWPGKRTNLPENAFTQRMLQECGQMAK
PDASVDLDNFKAISEQSPAEFGIDSCRVKAQPEDRSDRIREQIASAYPVI
HERTLLLFISFLEHKLTFGSEQEKAIYKDMTVVDLVQRLLAKRCVWFFGA
NDYYRTMQGNIGNEGFEAVGTPAEKEPLTLTSVLSYDEIKLSALLYVSCH
SEFINNGSRVNGGEVLQNKDTIEREGVVIGLIGARFERPDVMEYQDIMIT
KTQNTEANGYGFDLEQISSETVTPASDLRRIWREFYEEPRDFIYADTPYD
TTRFEEVSQGIFDHQVMRKRYAISFDTLLLEAQDRAFKAGKPAYIHVVGI
GLGVWKAARQQERTFLESFEGRLRALGERLSHIGVVHFSWFHLACVGSLH
DGAIIPVDKHPQGGIRIRNSVRNPGDKLTEDMLPVVTYAWDGNALPGNEF
WANMLISTGDPAAACSTLISELQNPHINVHYMNGANLHIASVEHGLLHVG
DYARRLIV*

BS14637.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:40:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG3568-PA 508 CG3568-PA 1..508 1..508 2664 100 Plus
CG2909-PA 505 CG2909-PA 11..498 24..507 1277 51.8 Plus