Clone BS14651 Report

Search the DGRC for BS14651

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG11694-RA
Protein status:BS14651.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14651.3prime Sequence

736 bp (635 high quality bases) assembled on 2006-10-13

> BS14651.3prime
ATGGTCTAGAAAGCTTTCAGTTGGTGCGCCCCCTCTTCAGCCAGAGTAAG
TGCCTCAGTTCCGCCCTCCTGCGCTCCCTGGTGGCCCTATGCCTGGCCTC
CTGGGCAGCACAGGCTGCCTTCTCGGCGGCGTTTTTGGTATTCTTGAAAT
CCACACGGGCCACCTCCAGCTGGCGGAGCAATAGCTCCACCCGCTTCTTG
GCCGCTTCCACAAGCTGTTGCTTCTCGCCCAGCTCCTGCTGAGCGCCACT
GGCCACGTGCTCCGAGTTGACCACATTATCCTGCGCATTCTTCACCGCCA
GCGTAATGGTGTTCAGCTGATCTGCCGCCTGTTTGGCCGCTTGCCCGGCC
GCAGCATAAGTAGTTTGGGTGGTCTGTAACAAGGTGCTCTCCTCCTGGAC
CACTAGCTCCCCCTCGCGCACCTCGGACTCCAGTTGCTCGACAATCTGTT
GCTTGCCGGCCAGAGCAGCTTCTGCCGCCTTGGCTGCGGCCAGCGCTTTG
TCGGCCAGTTGCTGCTTCACCTGGCGGGCAGCTGCCTCGCCAGCCTCTAT
CTGGGCATCGGATGCCTCCATGGCTTCCTTGGCCGCCTTCTGCGCAATGC
ATGAGGCCTTTACCCTGGTCTTTCCATTCATCTTGAAGTCGCACGGGGCA
CCGCCGGAGGATGACGACACACTGTTGTCGCCATCACCATGATGATCCGA
CATTAGAGCAGCTATCTCATTGGAGGACTGCGGCAA

BS14651.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-PA 786 CG11694-RA 67..786 736..17 3600 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:36:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-RA 935 CG11694-RA 136..856 736..16 3605 100 Minus
CG14354-RA 1041 CG14354-RA 281..489 598..390 250 74.6 Minus
CG14840-RA 1006 CG14840-RA 637..714 262..185 195 83.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8311282..8312002 16..736 3605 100 Plus
3R 32079331 3R 25815759..25815967 598..390 250 74.6 Minus
3R 32079331 3R 14260500..14260577 185..262 195 83.3 Plus
Blast to na_te.dros performed on 2015-02-10 21:36:51 has no hits.

BS14651.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:53 Download gff for BS14651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11694-PA 69..786 17..734 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:07:03 Download gff for BS14651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 138..858 13..734 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:43:36 Download gff for BS14651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 138..858 13..734 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:43:36 Download gff for BS14651.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8311280..8312000 13..734 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:07:03 Download gff for BS14651.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4137002..4137722 13..734 99   Plus

BS14651.5prime Sequence

750 bp (680 high quality bases) assembled on 2006-10-13

> BS14651.5prime
GAAGTTATCAGTCGACATGGAGATAGCACGAATCGCATTTCTACTTTTCT
TCCTGTTCTCAGATCATTCTGCGGGCCACAAGTTGCCGCAGTCCTCCAAT
GAGATAGCTGCTCTAATGTCGGATCATCATGGTGATGGCGACAACAGTGT
GTCGTCATCCTCCGGCGGTGCCCCGTGCGACTTCAAGATGAATGGAAAGA
CCAGGGTAAAGGCCTCATGCATTGCGCAGAAGGCGGCCAAGGAAGCCATG
GAGGCATCCGATGCCCAGATAGAGGCTGGCGAGGCAGCTGCCCGCCAGGT
GAAGCAGCAACTGGCCGACAAAGCGCTGGCCGCAGCCAAGGCGGCAGAAG
CTGCTCTGGCCGGCAAGCAACAGATTGTCGAGCAACTGGAGTCCGAGGTG
CGCGAGGGGGAGCTAGTGGTCCAGGAGGAGAGCACCTTGTTACAGACCAC
CCAAACTACTTATGCTGCGGCCGGGCAAGCGGCCAAACAGGCGGCAGATC
AGCTGAACACCATTACGCTGGCGGTGAAGAATGCGCAGGATAATGTGGTC
AACTCGGAGCACGTGGCCAGTGGCGCTCAGCAGGAGCTGGGCGAGAAGCA
ACAGCTTGTGGAAGCGGCCAAGAAGCGGGTGGAGCTATTGCTCCGCCAGC
TGGAGGTGGCCCGTGTGGATTTCAAGAATACCAAAAACGCCGCCGAGAAG
GCAGCCTGTGCTGCCCAGAAGGCCAGGCATAGGGCCACCAGGGAACGCAA

BS14651.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-PA 786 CG11694-RA 1..728 17..744 3615 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-RA 935 CG11694-RA 69..802 16..749 3640 99.7 Plus
CG14354-RA 1041 CG14354-RA 281..489 221..429 250 74.6 Plus
CG14840-RA 1006 CG14840-RA 637..714 557..634 195 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:38:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8311336..8312069 749..16 3640 99.7 Minus
3R 32079331 3R 25815759..25815967 221..429 250 74.6 Plus
3R 32079331 3R 14260500..14260577 634..557 195 83.3 Minus
Blast to na_te.dros performed on 2015-02-11 17:39:01 has no hits.

BS14651.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:53 Download gff for BS14651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11694-PA 1..732 17..748 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:23:52 Download gff for BS14651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 62..801 10..748 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:24:28 Download gff for BS14651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 62..801 10..748 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:24:28 Download gff for BS14651.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8311337..8312076 10..748 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:23:52 Download gff for BS14651.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4137059..4137798 10..748 99   Minus

BS14651.complete Sequence

818 bp assembled on 2006-11-01

GenBank Submission: FJ637742

> BS14651.complete
GAAGTTATCAGTCGACATGGAGATAGCACGAATCGCATTTCTACTTTTCT
TCCTGTTCTCAGATCATTCTGCGGGCCACAAGTTGCCGCAGTCCTCCAAT
GAGATAGCTGCTCTAATGTCGGATCATCATGGTGATGGCGACAACAGTGT
GTCGTCATCCTCCGGCGGTGCCCCGTGCGACTTCAAGATGAATGGAAAGA
CCAGGGTAAAGGCCTCATGCATTGCGCAGAAGGCGGCCAAGGAAGCCATG
GAGGCATCCGATGCCCAGATAGAGGCTGGCGAGGCAGCTGCCCGCCAGGT
GAAGCAGCAACTGGCCGACAAAGCGCTGGCCGCAGCCAAGGCGGCAGAAG
CTGCTCTGGCCGGCAAGCAACAGATTGTCGAGCAACTGGAGTCCGAGGTG
CGCGAGGGGGAGCTAGTGGTCCAGGAGGAGAGCACCTTGTTACAGACCAC
CCAAACTACTTATGCTGCGGCCGGGCAAGCGGCCAAACAGGCGGCAGATC
AGCTGAACACCATTACGCTGGCGGTGAAGAATGCGCAGGATAATGTGGTC
AACTCGGAGCACGTGGCCAGTGGCGCTCAGCAGGAGCTGGGCGAGAAGCA
ACAGCTTGTGGAAGCGGCCAAGAAGCGGGTGGAGCTATTGCTCCGCCAGC
TGGAGGTGGCCCGTGTGGATTTCAAGAATACCAAAAACGCCGCCGAGAAG
GCAGCCTGTGCTGCCCAGGAGGCCAGGCATAGGGCCACCAGGGAGCGCAG
GAGGGCGGAACTGAGGCACTTACTCTGGCTGAAGAGGGGGCGCACCAACT
GAAAGCTTTCTAGACCAT

BS14651.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-RA 786 CG11694-PA 1..786 17..802 3930 100 Plus
CG14354-RA 897 CG14354-PA 202..410 221..429 250 74.6 Plus
CG14840-RA 903 CG14840-PA 607..684 557..634 195 83.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:58:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-RA 935 CG11694-RA 69..856 16..803 3940 100 Plus
CG14354-RA 1041 CG14354-RA 281..489 221..429 250 74.6 Plus
CG14840-RA 1006 CG14840-RA 637..714 557..634 195 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8311282..8312069 803..16 3940 100 Minus
3R 32079331 3R 25815759..25815967 221..429 250 74.6 Plus
3R 32079331 3R 14260500..14260577 634..557 195 83.3 Minus
Blast to na_te.dros performed on 2014-11-26 14:58:51 has no hits.

BS14651.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:24:50 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 1..786 17..802 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:56:11 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 10..806 10..806 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:23 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 70..854 17..801 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:24:50 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 10..806 10..806 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:01 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
CG11694-RA 70..854 17..801 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:01 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8311284..8312068 17..801 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:23 Download gff for BS14651.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4137006..4137790 17..801 100   Minus

BS14651.pep Sequence

Translation from 16 to 801

> BS14651.pep
MEIARIAFLLFFLFSDHSAGHKLPQSSNEIAALMSDHHGDGDNSVSSSSG
GAPCDFKMNGKTRVKASCIAQKAAKEAMEASDAQIEAGEAAARQVKQQLA
DKALAAAKAAEAALAGKQQIVEQLESEVREGELVVQEESTLLQTTQTTYA
AAGQAAKQAADQLNTITLAVKNAQDNVVNSEHVASGAQQELGEKQQLVEA
AKKRVELLLRQLEVARVDFKNTKNAAEKAACAAQEARHRATRERRRAELR
HLLWLKRGRTN*

BS14651.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11694-PA 261 CG11694-PA 1..261 1..261 1277 100 Plus
CG14840-PA 300 CG14840-PA 9..276 6..254 496 46.6 Plus
CG14354-PA 298 CG14354-PA 11..247 17..248 494 49.8 Plus
CG34459-PC 305 CG34459-PC 90..295 42..240 422 47.6 Plus
CG34459-PB 305 CG34459-PB 90..295 42..240 422 47.6 Plus